BLASTX nr result

ID: Glycyrrhiza23_contig00010561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010561
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medic...   328   5e-88
ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [...   326   3e-87
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [...   311   6e-83
ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [...   307   1e-81
ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|2...   289   4e-76

>ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
           gi|355518642|gb|AET00266.1| Glycoside hydrolase family
           28 protein [Medicago truncatula]
          Length = 450

 Score =  328 bits (842), Expect = 5e-88
 Identities = 162/203 (79%), Positives = 176/203 (86%), Gaps = 2/203 (0%)
 Frame = -2

Query: 693 VAVKSGWDEYGIAYGRPSSNITIRRVSGSSPFAGIAVGSEASGGVENVLAEHINLYNMGV 514
           VAVKSGWDEYGIAYGR SSNITIRRVSGSSPFAGIAVGSE SGGVEN+LAEHINLYNMG+
Sbjct: 256 VAVKSGWDEYGIAYGRSSSNITIRRVSGSSPFAGIAVGSETSGGVENILAEHINLYNMGI 315

Query: 513 GIHIKTNIGRGGYIKNISVSHVYMEGARKGIKISGDVGGHPDDKFDPNAVPVVKGITIEN 334
           GIHIKTNIGRGGYIKNI+VS+VY+E ARKGIKISGDVG H DDK+D NA+P+VKGIT+ N
Sbjct: 316 GIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHADDKYDSNALPIVKGITMAN 375

Query: 333 VWGVKVLQAGLIQGLRKSPFTDICLSDINLH--NGVXXXXXXXXXXXXXPWKCSDVVGVA 160
           VWGVKVLQAGLI+G++ SPFTDICLSDINLH  NG               W+CSDV GVA
Sbjct: 376 VWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGT--------RSRTPSWQCSDVSGVA 427

Query: 159 HQVSPWPCSELISHQVGSCANYY 91
            QVSPWPCSELISHQ+GSCANYY
Sbjct: 428 LQVSPWPCSELISHQLGSCANYY 450


>ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 446

 Score =  326 bits (835), Expect = 3e-87
 Identities = 158/200 (79%), Positives = 173/200 (86%)
 Frame = -2

Query: 693 VAVKSGWDEYGIAYGRPSSNITIRRVSGSSPFAGIAVGSEASGGVENVLAEHINLYNMGV 514
           VAVKSGWDEYGIAYGRPSS+ITIRR++GSSPFAGIA+GSE SGGVENVLAEHINLYNMG+
Sbjct: 254 VAVKSGWDEYGIAYGRPSSDITIRRITGSSPFAGIAIGSETSGGVENVLAEHINLYNMGI 313

Query: 513 GIHIKTNIGRGGYIKNISVSHVYMEGARKGIKISGDVGGHPDDKFDPNAVPVVKGITIEN 334
           GIHIKTN GRGG+IKNI++SHVYME ARKGI+ISGDVG HPDDKFD NA+P+VKG+TI+N
Sbjct: 314 GIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKN 373

Query: 333 VWGVKVLQAGLIQGLRKSPFTDICLSDINLHNGVXXXXXXXXXXXXXPWKCSDVVGVAHQ 154
           VWG+KVLQAGLIQGLR SPFTDICL DINLH                PWKCSDV G AHQ
Sbjct: 374 VWGMKVLQAGLIQGLRNSPFTDICLYDINLHG--------VTGPRTPPWKCSDVSGFAHQ 425

Query: 153 VSPWPCSELISHQVGSCANY 94
           VSPWPCSEL S+Q GSCANY
Sbjct: 426 VSPWPCSELSSNQQGSCANY 445


>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 442

 Score =  311 bits (798), Expect = 6e-83
 Identities = 151/198 (76%), Positives = 166/198 (83%)
 Frame = -2

Query: 693 VAVKSGWDEYGIAYGRPSSNITIRRVSGSSPFAGIAVGSEASGGVENVLAEHINLYNMGV 514
           VAVKSGWDEYGIAYGRPS  ITIRRV+GSSPFAGIA+GSE SGGVENVLAEHINL+NMGV
Sbjct: 252 VAVKSGWDEYGIAYGRPSYGITIRRVTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGV 311

Query: 513 GIHIKTNIGRGGYIKNISVSHVYMEGARKGIKISGDVGGHPDDKFDPNAVPVVKGITIEN 334
           GIHIKTN GRGG IKNI+V+HVY+E AR+GIKI+GDVGGHPD+KF+PNA+PVVKGITI+N
Sbjct: 312 GIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKN 371

Query: 333 VWGVKVLQAGLIQGLRKSPFTDICLSDINLHNGVXXXXXXXXXXXXXPWKCSDVVGVAHQ 154
           VWGVKV QAGLI GLR SPFTD+CLSDIN H                 WKCSDV G AHQ
Sbjct: 372 VWGVKVNQAGLIHGLRNSPFTDVCLSDINFHG--------MEGPRSPSWKCSDVFGFAHQ 423

Query: 153 VSPWPCSELISHQVGSCA 100
           VSPWPCS+L S + GSCA
Sbjct: 424 VSPWPCSQLSSQEPGSCA 441


>ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 474

 Score =  307 bits (787), Expect = 1e-81
 Identities = 148/198 (74%), Positives = 166/198 (83%)
 Frame = -2

Query: 693 VAVKSGWDEYGIAYGRPSSNITIRRVSGSSPFAGIAVGSEASGGVENVLAEHINLYNMGV 514
           VAVKSGWDEYGIAYGRPS  ITIRR++GSSPFAGIA+GSE SGGVENVLAEHINL+NMGV
Sbjct: 284 VAVKSGWDEYGIAYGRPSYGITIRRLTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGV 343

Query: 513 GIHIKTNIGRGGYIKNISVSHVYMEGARKGIKISGDVGGHPDDKFDPNAVPVVKGITIEN 334
           GIHIKTN GRGG IKNI+V+HVY+E AR+GIKI+GDVGGHPD+KF+PNA+PVVKGITI+N
Sbjct: 344 GIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKN 403

Query: 333 VWGVKVLQAGLIQGLRKSPFTDICLSDINLHNGVXXXXXXXXXXXXXPWKCSDVVGVAHQ 154
           VWGV+V QAGLI GLR SPFTD+CLS+IN H                 WKCSDV G AHQ
Sbjct: 404 VWGVRVNQAGLIHGLRNSPFTDVCLSNINFHG--------MRGPRSPSWKCSDVFGFAHQ 455

Query: 153 VSPWPCSELISHQVGSCA 100
           VSPWPCS+L S + GSCA
Sbjct: 456 VSPWPCSQLSSQEPGSCA 473


>ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|222841984|gb|EEE79531.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  289 bits (739), Expect = 4e-76
 Identities = 142/202 (70%), Positives = 165/202 (81%), Gaps = 1/202 (0%)
 Frame = -2

Query: 693 VAVKSGWDEYGIAYGRPSSNITIRRVSGSSPFAGIAVGSEASGGVENVLAEHINLYNMGV 514
           VAVKSGWDEYGIAYGRPSS+ITIRR++GSSPF+GIAVGSE SGGV+NVL E++NLYNMGV
Sbjct: 219 VAVKSGWDEYGIAYGRPSSDITIRRITGSSPFSGIAVGSETSGGVKNVLVENVNLYNMGV 278

Query: 513 GIHIKTNIGRGGYIKNISVSHVYMEGARKGIKISGDVGGHPDDKFDPNAVPVVKGITIEN 334
           GIHIKTNIGRGG+IKNI+V+ VYME  RKGIKI+GDVG HPDD F+PNA+PVV GIT+++
Sbjct: 279 GIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKS 338

Query: 333 VWGVKVLQAGLIQGLRKSPFTDICLSDINLHNGVXXXXXXXXXXXXXPWKCSDVVGVAHQ 154
           +WG KV Q G IQGL+ SPFT ICLS+INLH                PWKCSDV G A  
Sbjct: 339 IWGEKVQQPGSIQGLKNSPFTGICLSNINLHG--------VPGPRSSPWKCSDVSGSALL 390

Query: 153 VSPWPCSELIS-HQVGSCANYY 91
           VSPWPCSEL S HQ GSC++++
Sbjct: 391 VSPWPCSELTSPHQTGSCSDHF 412


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