BLASTX nr result

ID: Glycyrrhiza23_contig00010549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010549
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   116   2e-24
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   112   4e-23
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   108   4e-22
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...    99   4e-19
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/58 (93%), Positives = 57/58 (98%)
 Frame = +1

Query: 112 MQRYHAGSCTSAVNNSTIGGPSSRDIGRADSSSLPANFSVSSRRQPPVNPYKLKCDKE 285
           MQRYHAGSCTSAVNNSTIGGPS+RD GR+DSSSLPANFSVSSRRQPP+NPYKLKCDKE
Sbjct: 1   MQRYHAGSCTSAVNNSTIGGPSTRDAGRSDSSSLPANFSVSSRRQPPLNPYKLKCDKE 58


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = +1

Query: 112 MQRYHAGSCTSAVNNSTIGGPSSRDIGRADSSSLPANFSVSSRRQPPVNPYKLKCDKE 285
           MQRYHAGSCTSAVNNS IGGPS+RDIGR DSSSLPANF VSSRRQPP+ PYKLKCDKE
Sbjct: 1   MQRYHAGSCTSAVNNSAIGGPSTRDIGRTDSSSLPANFPVSSRRQPPLTPYKLKCDKE 58


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  108 bits (271), Expect = 4e-22
 Identities = 51/58 (87%), Positives = 55/58 (94%)
 Frame = +1

Query: 112 MQRYHAGSCTSAVNNSTIGGPSSRDIGRADSSSLPANFSVSSRRQPPVNPYKLKCDKE 285
           MQRYHAGSCTSAVNNSTIGGPS+RD GR+DS SLPANF+VSSRRQ P+NPYKLKCDKE
Sbjct: 1   MQRYHAGSCTSAVNNSTIGGPSARDPGRSDSPSLPANFAVSSRRQLPLNPYKLKCDKE 58


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
           dehydrogenase, lipoyl-binding site [Medicago truncatula]
           gi|355498978|gb|AES80181.1| Mediator of RNA polymerase
           II transcription subunit [Medicago truncatula]
          Length = 2270

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/59 (83%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = +1

Query: 112 MQRYHAGSCTSAVNNSTIGGPSSRDIGRADSSSLPANFSVSSRR-QPPVNPYKLKCDKE 285
           MQRYHAGSCTSAVNN+TIGGPS+RDIGR DSSSLP NF VSSRR  PP   YKLKCDKE
Sbjct: 1   MQRYHAGSCTSAVNNNTIGGPSARDIGRIDSSSLPPNFPVSSRRLPPPFTLYKLKCDKE 59


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
           predicted protein [Populus trichocarpa]
          Length = 2219

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = +1

Query: 112 MQRYHAGSCTSAVNNSTIGGPSSRDIGRADSSSLPANFSVSSRRQPPVNPYKLKCDKE 285
           MQRYH   CTSAVNNS+IGG SSRD  R DSSSL +NFS++ RR PP+ PYKLKCDKE
Sbjct: 1   MQRYHTAGCTSAVNNSSIGGTSSRDSTRTDSSSLASNFSINPRRPPPLIPYKLKCDKE 58


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