BLASTX nr result

ID: Glycyrrhiza23_contig00010537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010537
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803...   177   6e-43
ref|XP_003616838.1| hypothetical protein MTR_5g084810 [Medicago ...   169   2e-40
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|NP_193700.2| Mitochondrial transcription termination factor ...   132   3e-29
emb|CAA19682.1| putative protein [Arabidopsis thaliana] gi|72687...   132   3e-29

>ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803162 [Glycine max]
          Length = 564

 Score =  177 bits (450), Expect = 6e-43
 Identities = 84/114 (73%), Positives = 100/114 (87%)
 Frame = +1

Query: 4   LCNCGVPRNRMGKIYKEAKEVFGYDRGLLSLKLKAYENLGLSKSSVIKLVVCCPSVLVGD 183
           LCN GVPRNRMGK +KEAKE+FGY  G+L  KL+AYENLGL KS+V+KLVVCCP +LVGD
Sbjct: 152 LCNYGVPRNRMGKFFKEAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGD 211

Query: 184 DVVDSEFVVVLDWLKKIGIENEWIVNYMSCSRTYSWKRMLDTIQFLNKVGYSEK 345
             V+ EFV VLDWLK+IGIE++W+VNY+SCSRTYSWKRMLD + FL+KVGYSE+
Sbjct: 212 --VNFEFVSVLDWLKRIGIESDWMVNYLSCSRTYSWKRMLDAMLFLHKVGYSEE 263


>ref|XP_003616838.1| hypothetical protein MTR_5g084810 [Medicago truncatula]
           gi|355518173|gb|AES99796.1| hypothetical protein
           MTR_5g084810 [Medicago truncatula]
          Length = 592

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/115 (70%), Positives = 97/115 (84%)
 Frame = +1

Query: 1   VLCNCGVPRNRMGKIYKEAKEVFGYDRGLLSLKLKAYENLGLSKSSVIKLVVCCPSVLVG 180
           VLC  GVPRNRM KIY EA+E+FGY  G+L  K +AYE+LGLSKSS+IKL VCCP +LVG
Sbjct: 174 VLCYHGVPRNRMAKIYTEAREIFGYGNGVLEKKFQAYEDLGLSKSSLIKLFVCCPLLLVG 233

Query: 181 DDVVDSEFVVVLDWLKKIGIENEWIVNYMSCSRTYSWKRMLDTIQFLNKVGYSEK 345
           D  VDSEFVVVLDWLK+IGIE++W VN MS S TYSWKRM++T++F ++VGYSEK
Sbjct: 234 D--VDSEFVVVLDWLKRIGIESKWFVNCMSSSNTYSWKRMIETLEFFHQVGYSEK 286


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/115 (59%), Positives = 92/115 (80%)
 Frame = +1

Query: 1   VLCNCGVPRNRMGKIYKEAKEVFGYDRGLLSLKLKAYENLGLSKSSVIKLVVCCPSVLVG 180
           VLCN G+PR+++G++YKEA E+FGY+ G+L LKL AYENLGLSK++V+KLV CCPS+L+G
Sbjct: 167 VLCNYGIPRSKIGRMYKEAIEIFGYNYGVLKLKLLAYENLGLSKTTVVKLVSCCPSLLIG 226

Query: 181 DDVVDSEFVVVLDWLKKIGIENEWIVNYMSCSRTYSWKRMLDTIQFLNKVGYSEK 345
              VD EFV VL  L + G++N+ I  Y+S   +Y WKR++DTI FL+KVGYSE+
Sbjct: 227 G--VDREFVNVLGRLNRAGLKNDLIGGYLSAKESYDWKRLIDTIYFLDKVGYSEE 279


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 575

 Score =  132 bits (332), Expect = 3e-29
 Identities = 60/114 (52%), Positives = 90/114 (78%)
 Frame = +1

Query: 4   LCNCGVPRNRMGKIYKEAKEVFGYDRGLLSLKLKAYENLGLSKSSVIKLVVCCPSVLVGD 183
           LCN G+PR ++G++YKEA+E+F Y+ G+L++KL+ YENLGLSK++VIKLV  CP +LVG 
Sbjct: 168 LCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPLLLVGG 227

Query: 184 DVVDSEFVVVLDWLKKIGIENEWIVNYMSCSRTYSWKRMLDTIQFLNKVGYSEK 345
             +D+EF  V+D LK + +  +W+  Y+S  +TYSW+R+L+TI+FL+KVG  E+
Sbjct: 228 --IDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEE 279


>emb|CAA19682.1| putative protein [Arabidopsis thaliana] gi|7268761|emb|CAB78967.1|
           putative protein [Arabidopsis thaliana]
          Length = 557

 Score =  132 bits (332), Expect = 3e-29
 Identities = 60/114 (52%), Positives = 90/114 (78%)
 Frame = +1

Query: 4   LCNCGVPRNRMGKIYKEAKEVFGYDRGLLSLKLKAYENLGLSKSSVIKLVVCCPSVLVGD 183
           LCN G+PR ++G++YKEA+E+F Y+ G+L++KL+ YENLGLSK++VIKLV  CP +LVG 
Sbjct: 168 LCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPLLLVGG 227

Query: 184 DVVDSEFVVVLDWLKKIGIENEWIVNYMSCSRTYSWKRMLDTIQFLNKVGYSEK 345
             +D+EF  V+D LK + +  +W+  Y+S  +TYSW+R+L+TI+FL+KVG  E+
Sbjct: 228 --IDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEE 279


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