BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010398
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ...   281   5e-74
ref|XP_003613759.1| Pentatricopeptide repeat-containing protein ...   280   1e-73
ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containi...   242   4e-62
ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   210   2e-52
ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|2...   205   5e-51

>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498082|gb|AES79285.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  281 bits (720), Expect = 5e-74
 Identities = 136/157 (86%), Positives = 147/157 (93%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNA 430
           LCKKGKVLEAR+VFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKG+APNA
Sbjct: 377 LCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNA 436

Query: 429 FTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVA 250
           FTYNMLIKGFCKVGNAKEGIR++EEMLE  C PNKSTY++LIDG+LL GGMKQEINKVV+
Sbjct: 437 FTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVS 496

Query: 249 LAMSNGVDGDLWNLFVKPVVGNVDCSAAELDRILIEN 139
           LAMS GVD DLWN+FVKPVVGN +   AELDRIL+EN
Sbjct: 497 LAMSTGVDADLWNIFVKPVVGNDNGGEAELDRILLEN 533



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/103 (33%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPN 433
           LCK  +V  A  V DE  G G V ++++Y T++ G    G++  A +++ +++++G +P+
Sbjct: 201 LCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPD 260

Query: 432 AFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLI 304
             +Y +L+ GFC++G   + IR+M+ M + G  PN+ TY V+I
Sbjct: 261 VTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMI 303



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/105 (30%), Positives = 62/105 (59%)
 Frame = -2

Query: 540 SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIRIM 361
           ++++ N L+  LC+G E+  A ++ D+M   GL PN  +Y  ++ GF   G+    +++ 
Sbjct: 190 NVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVF 249

Query: 360 EEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVALAMSNGVD 226
            E+L++G  P+ ++Y+VL+DG    G +   I +V+ +   NGV+
Sbjct: 250 REVLDRGWSPDVTSYTVLVDGFCRLGKLVDAI-RVMDIMEDNGVE 293



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = -2

Query: 600 KGKVLEARSVFDE-FGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 424
           +G +  A  VF E   +G    + +Y  L+ G C  G+L +A R+ D M + G+ PN  T
Sbjct: 239 RGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVT 298

Query: 423 YNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQ 271
           Y ++I+ +CK   + E + ++E+M+ K           ++D L   G +++
Sbjct: 299 YGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEK 349


>ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515094|gb|AES96717.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 733

 Score =  280 bits (717), Expect = 1e-73
 Identities = 135/157 (85%), Positives = 148/157 (94%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNA 430
           LCKKGKVLEAR++FDEFGKG VASLLTYNTLIAGLCEGG+LCEAARLWD+MVEKG+APNA
Sbjct: 241 LCKKGKVLEARNMFDEFGKGLVASLLTYNTLIAGLCEGGKLCEAARLWDEMVEKGVAPNA 300

Query: 429 FTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVA 250
           FTYNMLIKGFCKV NAKEGIR++EEMLE  CFPNKSTY++LIDG+LLSGGMKQEINKVV+
Sbjct: 301 FTYNMLIKGFCKVRNAKEGIRVLEEMLENRCFPNKSTYTILIDGILLSGGMKQEINKVVS 360

Query: 249 LAMSNGVDGDLWNLFVKPVVGNVDCSAAELDRILIEN 139
           LAMS GVD DLWN+FVKPVVGN D  AAELDRIL+EN
Sbjct: 361 LAMSTGVDADLWNIFVKPVVGNDDGGAAELDRILLEN 397



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/98 (32%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPN 433
           LCK  +V  A  V DE  G G V ++++Y T++ G    G++  A +++ +++++G +P+
Sbjct: 79  LCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPD 138

Query: 432 AFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKST 319
             +Y +L+ GFC++G   + IR+M+ M E G  PN+ +
Sbjct: 139 VTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNEKS 176



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/100 (32%), Positives = 58/100 (58%)
 Frame = -2

Query: 525 NTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIRIMEEMLE 346
           N L+  LC+G E+  A ++ D+M   GL PN  +Y  ++ GF   G+    +++  E+L+
Sbjct: 73  NILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLD 132

Query: 345 KGCFPNKSTYSVLIDGLLLSGGMKQEINKVVALAMSNGVD 226
           +G  P+ ++Y+VL+DG    G +   I +V+ +   NGV+
Sbjct: 133 RGWSPDVTSYTVLVDGFCRLGKLVDAI-RVMDVMEENGVE 171


>ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  242 bits (617), Expect = 4e-62
 Identities = 113/159 (71%), Positives = 138/159 (86%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNA 430
           LCK+GKV+EAR V DE  KG VASL+TYNTLIAG+CE G+LCEA RLWD+MVEKG  PNA
Sbjct: 371 LCKEGKVVEARGVLDELEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNA 430

Query: 429 FTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVA 250
           FTYN+L+KGFCKVG+ KE IR++EEM+E GC PNKST+S+L+DG+ LSGG K+EI+KVV 
Sbjct: 431 FTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKKEEIDKVVL 490

Query: 249 LAMSNGVDGDLWNLFVKPVVGNVDCSAAELDRILIENAV 133
           LAM+ GVDG+ W+LF+K VVGN+D +A+ELDRIL ENAV
Sbjct: 491 LAMTTGVDGEWWDLFLKLVVGNLDGNASELDRILTENAV 529



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/104 (33%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFG-KGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPN 433
           LCK+ +V  A  V DE    G V ++++Y+T++ G    G++  A R++ ++++KG  P+
Sbjct: 196 LCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPD 255

Query: 432 AFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLID 301
             +Y +L+ GFC++G   + IR+M+ M E    P++ TY V+I+
Sbjct: 256 VTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIE 299



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = -2

Query: 600 KGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 424
           KG +  A  VF E   KG +  + +Y  L++G C  G+L +A R+ D M E  + P+  T
Sbjct: 234 KGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVT 293

Query: 423 YNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQ 271
           Y ++I+ +CK     E + ++E+M+EKG  P+      ++D L   G +++
Sbjct: 294 YGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVER 344



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/94 (31%), Positives = 55/94 (58%)
 Frame = -2

Query: 546 VASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEGIR 367
           V ++++ N L+  LC+  E+  A R+ D+M   GL PN  +Y+ ++ GF   G+ +  +R
Sbjct: 183 VPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMR 242

Query: 366 IMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEI 265
           +  E+L+KG  P+ ++Y+VL+ G    G +   I
Sbjct: 243 VFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAI 276


>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  210 bits (534), Expect = 2e-52
 Identities = 102/161 (63%), Positives = 129/161 (80%), Gaps = 3/161 (1%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNA 430
           LCK+GKV EAR +FDEF KGS+ S LTYN LIAG+CEGGEL EAARLWD+MVEKG  PNA
Sbjct: 426 LCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNA 485

Query: 429 FTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVA 250
           FTYNMLIKGFCKVGNA+EGIR+MEEML+ GC PNK+TY++L++G L   G++ E+  V++
Sbjct: 486 FTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEG-LYELGLEGEVTNVLS 544

Query: 249 LAMS-NGVDGDLWNLFVKPVV--GNVDCSAAELDRILIENA 136
           +A S  GVD + W +F+   V  GN+D   A++DRIL+E+A
Sbjct: 545 MASSRGGVDAECWGVFLAKFVNGGNIDVEGAKIDRILVESA 585



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPN 433
           LCKK  +  A  V +E    G + +++TY T++ G    G++  A R++ +++++G  P+
Sbjct: 251 LCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPD 310

Query: 432 AFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLID 301
             TY +L+ G+CK G   + +++M+EM E    PN  TY V+I+
Sbjct: 311 PTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIE 354



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = -2

Query: 600 KGKVLEARSVFDEF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 424
           KG ++ AR VF E   +G V    TY  L+ G C+ G   +A ++ D+M E  + PN  T
Sbjct: 289 KGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVT 348

Query: 423 YNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSG 283
           Y ++I+ +CK   + E + ++++MLEK   P+ +    +ID L   G
Sbjct: 349 YGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEG 395



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/90 (31%), Positives = 50/90 (55%)
 Frame = -2

Query: 552 GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEG 373
           G V ++ T N L+  LC+  ++  A R+ ++M   G  PN  TY  ++ G+   G+    
Sbjct: 236 GIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGA 295

Query: 372 IRIMEEMLEKGCFPNKSTYSVLIDGLLLSG 283
            R+  E+L++G  P+ +TY++L+DG    G
Sbjct: 296 RRVFGEILDRGWVPDPTTYTILMDGYCKKG 325



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = -2

Query: 606 CKKGKVLEARSVFDEFGKGSVA-SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNA 430
           CKKG+ ++A  V DE  +  V  + +TY  +I   C+  +  E   L DDM+EK   P++
Sbjct: 322 CKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSS 381

Query: 429 FTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSG 283
                +I   C+ G  +    + +++L+K C P+ +  S LI  L   G
Sbjct: 382 ALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEG 430



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = -2

Query: 552 GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEK-GLAPNAFTYNMLIKGFCKVGNAKE 376
           G   S+ ++NTL+  L +         ++ +  +K G+ PN FT N+L+K  CK  +   
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDA 259

Query: 375 GIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGM 277
            IR++EEM   G  PN  TY+ ++ G +  G M
Sbjct: 260 AIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDM 292


>ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|222858420|gb|EEE95967.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  205 bits (522), Expect = 5e-51
 Identities = 100/157 (63%), Positives = 126/157 (80%), Gaps = 1/157 (0%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNA 430
           LCK+GKV EAR +FDEF +G++ SL+TYNTLIAG+CE GEL EA RLWDDMVEK   PNA
Sbjct: 343 LCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNA 402

Query: 429 FTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVA 250
           FTYNMLIKGF K G  KEG+RI+EEML+ GC PNKSTY++LI+GL  S GM+ +++KV++
Sbjct: 403 FTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQES-GMEGDVDKVMS 461

Query: 249 LAM-SNGVDGDLWNLFVKPVVGNVDCSAAELDRILIE 142
           +AM S  VD D W+LF+  +VGN+DC    LDR+L+E
Sbjct: 462 MAMASREVDADSWDLFLHKIVGNLDCGTGALDRLLME 498



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
 Frame = -2

Query: 609 LCKKGKVLEARSVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPN 433
           LCKK  V  A  VFDE    G + +L+TY T++ G    G+L  A +++ ++ +KG  P+
Sbjct: 168 LCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPD 227

Query: 432 AFTYNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLID 301
           A TY +L+ G+CK G   + I++M+ M   G  PN+ TY V+ID
Sbjct: 228 ATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMID 271



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = -2

Query: 600 KGKVLEARSVFDEFG-KGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFT 424
           +G ++ A  VF E   KG +    TY  L+ G C+ G L +A ++ D+M   G+ PN  T
Sbjct: 206 RGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVT 265

Query: 423 YNMLIKGFCKVGNAKEGIRIMEEMLEKGCFPNKSTYSVLIDGLLLSG 283
           Y ++I  +CK   + E   ++++ML+K   P+ +    +ID L   G
Sbjct: 266 YGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDG 312



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/109 (30%), Positives = 60/109 (55%)
 Frame = -2

Query: 552 GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGLAPNAFTYNMLIKGFCKVGNAKEG 373
           G + ++ ++N LI  LC+  ++  A +++D+M   G+ PN  TY  ++ GF   G+    
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212

Query: 372 IRIMEEMLEKGCFPNKSTYSVLIDGLLLSGGMKQEINKVVALAMSNGVD 226
            ++  E+ +KG  P+ +TY+VL+ G    G +   I KV+     NGV+
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAI-KVMDNMEYNGVE 260