BLASTX nr result

ID: Glycyrrhiza23_contig00010351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010351
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI49627.1| inducer of CBF expression 1 [Vitis vinifera]            75   9e-12
ref|XP_002275711.1| PREDICTED: transcription factor ICE1 isoform...    75   9e-12
emb|CAN62843.1| hypothetical protein VITISV_021185 [Vitis vinifera]    75   9e-12
gb|AEF33833.1| ICE transcription factor 1 [Eucalyptus globulus] ...    60   2e-07
gb|ADY68776.1| inducer of CBF expression 1 protein [Eucalyptus c...    59   6e-07

>gb|AFI49627.1| inducer of CBF expression 1 [Vitis vinifera]
          Length = 538

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 58/141 (41%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
 Frame = -1

Query: 438 PFGNGFDLGSLGSQGGFLAPFQGNHTSDFPAFIGFS-----AQMGP---SSNLEFPAVTR 283
           PF NGFDLG    + GFLAP QG  +S+ P  +GF+      QMG    SS+ EFP ++R
Sbjct: 132 PFDNGFDLGC---EPGFLAPLQGIQSSNSPGLMGFTGLSSQTQMGTTELSSSSEFP-ISR 187

Query: 282 AVELSPS-------FRPMGGEMEQLVLGCSGPSNALFSNKANVSRPLQAVALRPVGMPPT 124
            +  S S       F P G E      G  G  N+LF N++ V RPL+     PVG  PT
Sbjct: 188 LLPASDSTGSLGAGFTPTGFE------GFDGSGNSLFLNRSKVLRPLE--VFPPVGAQPT 239

Query: 123 LFEKRAV---RFGGADKVGAL 70
           LF+KRA        +DK+G L
Sbjct: 240 LFQKRAALRQSSSASDKLGNL 260


>ref|XP_002275711.1| PREDICTED: transcription factor ICE1 isoform 1 [Vitis vinifera]
          Length = 538

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 58/141 (41%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
 Frame = -1

Query: 438 PFGNGFDLGSLGSQGGFLAPFQGNHTSDFPAFIGFS-----AQMGP---SSNLEFPAVTR 283
           PF NGFDLG    + GFLAP QG  +S+ P  +GF+      QMG    SS+ EFP ++R
Sbjct: 132 PFDNGFDLGC---EPGFLAPLQGIQSSNSPGLMGFTGLSSQTQMGTPELSSSSEFP-ISR 187

Query: 282 AVELSPS-------FRPMGGEMEQLVLGCSGPSNALFSNKANVSRPLQAVALRPVGMPPT 124
            +  S S       F P G E      G  G  N+LF N++ V RPL+     PVG  PT
Sbjct: 188 LLPASDSTGSLGAGFTPAGFE------GFDGSGNSLFLNRSKVLRPLE--VFPPVGAQPT 239

Query: 123 LFEKRAV---RFGGADKVGAL 70
           LF+KRA        +DK+G L
Sbjct: 240 LFQKRAALRQSSSASDKLGNL 260


>emb|CAN62843.1| hypothetical protein VITISV_021185 [Vitis vinifera]
          Length = 577

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 58/141 (41%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
 Frame = -1

Query: 438 PFGNGFDLGSLGSQGGFLAPFQGNHTSDFPAFIGFS-----AQMGP---SSNLEFPAVTR 283
           PF NGFDLG    + GFLAP QG  +S+ P  +GF+      QMG    SS+ EFP ++R
Sbjct: 132 PFDNGFDLGC---EPGFLAPLQGIQSSNSPGLMGFTGLSSQTQMGTPELSSSSEFP-ISR 187

Query: 282 AVELSPS-------FRPMGGEMEQLVLGCSGPSNALFSNKANVSRPLQAVALRPVGMPPT 124
            +  S S       F P G E      G  G  N+LF N++ V RPL+     PVG  PT
Sbjct: 188 LLPASDSTGSLGAGFTPAGFE------GFDGSGNSLFLNRSKVLRPLE--VFPPVGAQPT 239

Query: 123 LFEKRAV---RFGGADKVGAL 70
           LF+KRA        +DK+G L
Sbjct: 240 LFQKRAALRQSSSASDKLGNL 260


>gb|AEF33833.1| ICE transcription factor 1 [Eucalyptus globulus]
           gi|333470598|gb|AEF33834.1| ICE transcription factor 1
           [Eucalyptus globulus]
          Length = 560

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 51/135 (37%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
 Frame = -1

Query: 435 FGNGFDLGSLGSQGGFLAPFQGNHTSDFPAFIGFSAQMGPSSNLEFPAVTRAVELSPSFR 256
           F NGFDLG      G     QGN TS  P  +G S ++G  S L  P  +R V L  +  
Sbjct: 171 FDNGFDLGC--DAAGLFGSVQGNQTSSAPLLMGGS-ELGSGSEL-LPVPSRLVPLGENST 226

Query: 255 --PMGGEMEQLVLGCSGPSNALFSNKAN-VSRPLQAVALRPVGMPPTLFEKRAV------ 103
             P GG       G   P N LF+N++  V RPL+       G  PTLF+KRA       
Sbjct: 227 QLPGGGFGLTGFEGFESPGNPLFTNRSTKVLRPLEVFP--QTGAQPTLFQKRAALRNGSG 284

Query: 102 -RFGGADKVGALMVS 61
              GGA+K+G L +S
Sbjct: 285 SNGGGAEKLGNLEIS 299


>gb|ADY68776.1| inducer of CBF expression 1 protein [Eucalyptus camaldulensis]
          Length = 523

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 50/134 (37%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
 Frame = -1

Query: 435 FGNGFDLGSLGSQGGFLAPFQGNHTSDFPAFIGFSAQMGPSSNLEFPAVTRAVELSPSFR 256
           F NGFDLG      G     QGN TS  P  +G S ++G  S L  P  +R V L  +  
Sbjct: 142 FDNGFDLGC--DAAGLFGSVQGNQTSSAPLLMGGS-ELGSGSEL-LPVPSRLVPLGENST 197

Query: 255 --PMGGEMEQLVLGCSGPSNALFSNKAN-VSRPLQAVALRPVGMPPTLFEKRAV------ 103
             P GG       G   P N LF+N++  V RPL+       G  PTLF+KRA       
Sbjct: 198 QLPGGGFGLTGFEGFESPGNPLFTNRSTKVLRPLEVFP--QTGAQPTLFQKRAALRNGSG 255

Query: 102 -RFGGADKVGALMV 64
              GGA+K+G L +
Sbjct: 256 SNGGGAEKLGNLEI 269


Top