BLASTX nr result

ID: Glycyrrhiza23_contig00010289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010289
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47516.1| unknown [Lotus japonicus]                              365   2e-98
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...   362   2e-97
ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago tr...   340   4e-91
gb|AFK43193.1| unknown [Lotus japonicus]                              319   9e-85
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   310   4e-82

>gb|AFK47516.1| unknown [Lotus japonicus]
          Length = 266

 Score =  365 bits (937), Expect = 2e-98
 Identities = 196/266 (73%), Positives = 207/266 (77%), Gaps = 6/266 (2%)
 Frame = +3

Query: 393  MAAAIARSFHIQPRSLFNSNTIVKCSPAAGGYSSSWLGGPAAARY------RRTCVAAQQ 554
            MAAAIARS+  QPRSLFNSNTI   SP  GGYS  WLG PAA+R       R+ C A Q 
Sbjct: 1    MAAAIARSYSFQPRSLFNSNTIYNPSPY-GGYS--WLG-PAASRAGTTPRCRQICAAMQP 56

Query: 555  RPTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGVFGILVT 734
            RPTW              AGD+GFDPLGLGEDPESL+WYVQAELVHARFAMLGVFGILVT
Sbjct: 57   RPTWLPGLDPPAYLDGTLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVT 116

Query: 735  DLLRVTGLSKIPVWFEAGAVKYEFANTETLLIVQLLLMGFAETKRYMDFVSPGSQAKEGS 914
            DLLRVTGLSKIPVWFEAGAVKYEF NT+TL+IVQLLLMGFAETKRYMDF+ PGSQAKEGS
Sbjct: 117  DLLRVTGLSKIPVWFEAGAVKYEFTNTQTLIIVQLLLMGFAETKRYMDFIGPGSQAKEGS 176

Query: 915  FFGLEASXXXXXXXXXXXXXXXXXXXAKDIKNAHDSKLKEIKNGRLAMVAMLGIFVQASV 1094
            FFGLEAS                   AKDIKNA +SKLKEIKNGRLAMVA+LGIFVQASV
Sbjct: 177  FFGLEASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASV 236

Query: 1095 TRVGPIDNLVEHLSNPWHKTIIQILA 1172
            T VGPIDNLVEHLSNPWHKT+IQ LA
Sbjct: 237  THVGPIDNLVEHLSNPWHKTVIQTLA 262


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
            [Glycine max]
          Length = 263

 Score =  362 bits (928), Expect = 2e-97
 Identities = 191/262 (72%), Positives = 202/262 (77%), Gaps = 2/262 (0%)
 Frame = +3

Query: 393  MAAAIARSFHIQPRSLFNSNTIVKCSPAAGGYSSSWLGGPAAA--RYRRTCVAAQQRPTW 566
            MA AI RSF IQP SLFN+ ++ + SPA      SWLG  AAA  RYR+TCV AQQRPTW
Sbjct: 1    MAVAIGRSFSIQPGSLFNNKSLDRGSPAG---RLSWLGDGAAATPRYRQTCVGAQQRPTW 57

Query: 567  XXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGVFGILVTDLLR 746
                          AGDFGFDPLGL EDP SL+WYVQAELVH RFAMLGVFGILVTDLLR
Sbjct: 58   LPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGILVTDLLR 117

Query: 747  VTGLSKIPVWFEAGAVKYEFANTETLLIVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGL 926
            VTG+SKIPVWFEAGAVKY+FANT+TL +VQL+LMGF ETKRYMDFVSPGSQAKEGSFFGL
Sbjct: 118  VTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETKRYMDFVSPGSQAKEGSFFGL 177

Query: 927  EASXXXXXXXXXXXXXXXXXXXAKDIKNAHDSKLKEIKNGRLAMVAMLGIFVQASVTRVG 1106
            EAS                   AKDI NAHD KLKEIKNGRLAMVAMLGIFVQASVT VG
Sbjct: 178  EASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVG 237

Query: 1107 PIDNLVEHLSNPWHKTIIQILA 1172
            PIDNLVEHLSNPWHKTIIQ LA
Sbjct: 238  PIDNLVEHLSNPWHKTIIQTLA 259


>ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
            gi|355492086|gb|AES73289.1| Chlorophyll a-b binding
            protein [Medicago truncatula]
          Length = 267

 Score =  340 bits (873), Expect = 4e-91
 Identities = 184/264 (69%), Positives = 199/264 (75%), Gaps = 6/264 (2%)
 Frame = +3

Query: 399  AAIARSFHIQPRSLFNSNTIVKCSPAAGGYSSSWLGGPAAA------RYRRTCVAAQQRP 560
            AAIARSFH Q  SL NSN I K  P+  G+   WL  PAAA      R ++ C AAQQRP
Sbjct: 5    AAIARSFHFQQHSLINSNVIGK--PSTAGHH--WLR-PAAAGTGVTPRCKQICAAAQQRP 59

Query: 561  TWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGVFGILVTDL 740
            TW               GDFGFDPLGLGEDPESLKWYVQAELVH+RFAMLGV GILVTDL
Sbjct: 60   TWLPGLDPPTYLDGTLPGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVLGILVTDL 119

Query: 741  LRVTGLSKIPVWFEAGAVKYEFANTETLLIVQLLLMGFAETKRYMDFVSPGSQAKEGSFF 920
            LRV G++ IP+WFEAGAVKYEFANT TL++VQLLLMG+AET+RYMDFVSPGSQAKEGSFF
Sbjct: 120  LRVAGVNSIPIWFEAGAVKYEFANTGTLVVVQLLLMGYAETRRYMDFVSPGSQAKEGSFF 179

Query: 921  GLEASXXXXXXXXXXXXXXXXXXXAKDIKNAHDSKLKEIKNGRLAMVAMLGIFVQASVTR 1100
            GLEAS                   AKDIK+A + KLKEIKNGRLAMVA+LGIFVQASVT 
Sbjct: 180  GLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTH 239

Query: 1101 VGPIDNLVEHLSNPWHKTIIQILA 1172
            VGPIDNLVEHLSNPWHKTIIQILA
Sbjct: 240  VGPIDNLVEHLSNPWHKTIIQILA 263


>gb|AFK43193.1| unknown [Lotus japonicus]
          Length = 213

 Score =  319 bits (818), Expect = 9e-85
 Identities = 162/208 (77%), Positives = 170/208 (81%)
 Frame = +3

Query: 549  QQRPTWXXXXXXXXXXXXXXAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGVFGIL 728
            Q RPTW              AGD+GFDPLGLGEDPESL+WYVQAELVHARFAMLGVFGIL
Sbjct: 2    QPRPTWLPGLDPPAYLDGTLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGIL 61

Query: 729  VTDLLRVTGLSKIPVWFEAGAVKYEFANTETLLIVQLLLMGFAETKRYMDFVSPGSQAKE 908
            VTDLLRVTGLSKIPVWFEAGAVKYEF NT+TL+IVQLLLMGFAETKRYMDF+SPGSQAKE
Sbjct: 62   VTDLLRVTGLSKIPVWFEAGAVKYEFTNTQTLIIVQLLLMGFAETKRYMDFISPGSQAKE 121

Query: 909  GSFFGLEASXXXXXXXXXXXXXXXXXXXAKDIKNAHDSKLKEIKNGRLAMVAMLGIFVQA 1088
            GSFFGLEAS                   AKDIKNA +SKLKEIKNGRLAMVA+LGIFVQA
Sbjct: 122  GSFFGLEASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQA 181

Query: 1089 SVTRVGPIDNLVEHLSNPWHKTIIQILA 1172
            SVT VGPIDNLVEHLSNPWHKT+IQ LA
Sbjct: 182  SVTHVGPIDNLVEHLSNPWHKTVIQTLA 209


>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
            vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
            product [Vitis vinifera]
          Length = 264

 Score =  310 bits (795), Expect = 4e-82
 Identities = 162/261 (62%), Positives = 182/261 (69%), Gaps = 1/261 (0%)
 Frame = +3

Query: 393  MAAAIARSFHIQPRSLFNSNTIVKCSPAAGGYSSSWLGGPAAARYRR-TCVAAQQRPTWX 569
            MA  +   F +QP S  +      C P            P  +R+   T V AQQRPTW 
Sbjct: 1    MAITVGTGFLVQPSSSLSLLGRKSCRPTLDVAYRFLPARPGPSRFSHGTVVQAQQRPTWL 60

Query: 570  XXXXXXXXXXXXXAGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGVFGILVTDLLRV 749
                         AGDFGFDPLGLGEDPE+L+WYVQAELVHARFAM GV GILVTDLLRV
Sbjct: 61   PGLDPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQAELVHARFAMAGVAGILVTDLLRV 120

Query: 750  TGLSKIPVWFEAGAVKYEFANTETLLIVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLE 929
            TG+S +PVW+EAGAVK+EFA+TE L IVQL+LMGF ETKRYMDF +PGSQAKEGSFFGLE
Sbjct: 121  TGISNLPVWYEAGAVKFEFASTEALFIVQLILMGFVETKRYMDFTNPGSQAKEGSFFGLE 180

Query: 930  ASXXXXXXXXXXXXXXXXXXXAKDIKNAHDSKLKEIKNGRLAMVAMLGIFVQASVTRVGP 1109
            A+                   A+DIKNAHD KLKEIKNGRLAMVAMLG+FVQASVT  GP
Sbjct: 181  AALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEIKNGRLAMVAMLGVFVQASVTHAGP 240

Query: 1110 IDNLVEHLSNPWHKTIIQILA 1172
            I+NLVEHLSNPWHKTIIQ ++
Sbjct: 241  IENLVEHLSNPWHKTIIQTIS 261


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