BLASTX nr result

ID: Glycyrrhiza23_contig00010257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010257
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602004.1| Tetratricopeptide repeat protein [Medicago t...   619   e-175
gb|AFK36694.1| unknown [Medicago truncatula]                          613   e-173
ref|XP_003552098.1| PREDICTED: trafficking protein particle comp...   597   e-168
ref|XP_003538513.1| PREDICTED: trafficking protein particle comp...   596   e-168
ref|XP_004143481.1| PREDICTED: trafficking protein particle comp...   520   e-145

>ref|XP_003602004.1| Tetratricopeptide repeat protein [Medicago truncatula]
            gi|355491052|gb|AES72255.1| Tetratricopeptide repeat
            protein [Medicago truncatula]
          Length = 359

 Score =  619 bits (1595), Expect = e-175
 Identities = 308/361 (85%), Positives = 331/361 (91%)
 Frame = -2

Query: 1200 MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 1021
            M+SDSPRSE+QTDPL+N  +ELCHDLHSLQDLA RGAWRSIIDKV+RARAL+LLQKPHDH
Sbjct: 1    MESDSPRSETQTDPLINPLDELCHDLHSLQDLANRGAWRSIIDKVARARALSLLQKPHDH 60

Query: 1020 LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRFGSMVPFSLRWLH 841
            LTYLAFNALAFTKLRRFNEAS+ELDS EDLDSSHYRYETYPK+YPNR GSMVPFSLRWLH
Sbjct: 61   LTYLAFNALAFTKLRRFNEASSELDSVEDLDSSHYRYETYPKVYPNRVGSMVPFSLRWLH 120

Query: 840  ALIPIKLGQRQQGIDRLYRLLDFVREKINDKKHNNLSISLGAWRRREVFVVNCIIGQHLG 661
            ALIPIKLGQRQQGIDRLY LLDFVREKI  K+ +NLS S+  WR+REVFVVNCIIG HL 
Sbjct: 121  ALIPIKLGQRQQGIDRLYNLLDFVREKIRIKEDDNLSASVRVWRKREVFVVNCIIGHHLS 180

Query: 660  HKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSLL 481
            HKEFGVCLSL+K L+SR   DP LISQLGYIQLQ GDLEGAK SFLK E +GK+ GS  L
Sbjct: 181  HKEFGVCLSLIKTLISRDPEDPFLISQLGYIQLQTGDLEGAKDSFLKAEGDGKNHGS--L 238

Query: 480  SEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSDS 301
            SEVE KNL NRNKAL+YMVGKDYVSAVREY+ CIERD++D+VA NNKALCLMYLRDLSDS
Sbjct: 239  SEVEFKNLANRNKALIYMVGKDYVSAVREYDVCIERDHSDIVAFNNKALCLMYLRDLSDS 298

Query: 300  IKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTR 121
            IKVLENALERVPTVALNET+VVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFD+TCTR
Sbjct: 299  IKVLENALERVPTVALNETIVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDSTCTR 358

Query: 120  T 118
            T
Sbjct: 359  T 359


>gb|AFK36694.1| unknown [Medicago truncatula]
          Length = 359

 Score =  613 bits (1582), Expect = e-173
 Identities = 305/361 (84%), Positives = 330/361 (91%)
 Frame = -2

Query: 1200 MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 1021
            M+SDSPRSE+QTDPL+N  +ELCHDLHSLQDLA RGAWRSIIDKV+RARAL+LLQKPHDH
Sbjct: 1    MESDSPRSETQTDPLINPLDELCHDLHSLQDLANRGAWRSIIDKVARARALSLLQKPHDH 60

Query: 1020 LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRFGSMVPFSLRWLH 841
            LTYLAFNALAFTKLRRFNEAS+ELDS EDLDSSHYRYETYPK++PNR GS+VPFSLRWLH
Sbjct: 61   LTYLAFNALAFTKLRRFNEASSELDSVEDLDSSHYRYETYPKVHPNRVGSIVPFSLRWLH 120

Query: 840  ALIPIKLGQRQQGIDRLYRLLDFVREKINDKKHNNLSISLGAWRRREVFVVNCIIGQHLG 661
            ALIPIKLGQRQQGIDRLY LLDFVREKI  K+ +NLS S+  WR+REVFVVNCIIG HL 
Sbjct: 121  ALIPIKLGQRQQGIDRLYNLLDFVREKIRIKEDDNLSASVRVWRKREVFVVNCIIGHHLS 180

Query: 660  HKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSLL 481
            HKEFGVCLSL+K L+SR   DP LISQLGYIQLQ GDLEGAK SFLK E +GK+ GS  L
Sbjct: 181  HKEFGVCLSLIKTLISRDPEDPFLISQLGYIQLQTGDLEGAKDSFLKAEGDGKNHGS--L 238

Query: 480  SEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSDS 301
            SEVE KNL NRNKAL+YMVGKDYVSAVREY+ CIERD++D+ A NNKALCLMYLRDLSDS
Sbjct: 239  SEVEFKNLANRNKALIYMVGKDYVSAVREYDVCIERDHSDIAAFNNKALCLMYLRDLSDS 298

Query: 300  IKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTR 121
            IKVLENALERVPTVALNET+VVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFD+TCTR
Sbjct: 299  IKVLENALERVPTVALNETIVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDSTCTR 358

Query: 120  T 118
            T
Sbjct: 359  T 359


>ref|XP_003552098.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Glycine max]
          Length = 360

 Score =  597 bits (1540), Expect = e-168
 Identities = 303/362 (83%), Positives = 328/362 (90%), Gaps = 1/362 (0%)
 Frame = -2

Query: 1200 MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 1021
            MDS+S  S+SQ  PL N  ++ CHD+ SL++LA RGAWRSIIDKVSRARAL+LL KPHDH
Sbjct: 1    MDSESSNSDSQPHPLSNPIDDACHDMSSLEELANRGAWRSIIDKVSRARALSLLHKPHDH 60

Query: 1020 LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRFGSMVPFSLRWLH 841
            LTYLAFNAL+FTKLRRFNEASAELDS EDLDSSHYRYETYPKIYPNR GSMVPFSLRWLH
Sbjct: 61   LTYLAFNALSFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRIGSMVPFSLRWLH 120

Query: 840  ALIPIKLGQRQQGIDRLYRLLDFVREKINDK-KHNNLSISLGAWRRREVFVVNCIIGQHL 664
            ALIPIKLGQRQQG+DR Y LLDFVR KI +K K +NL +SL  WR+REVFVVNCIIG HL
Sbjct: 121  ALIPIKLGQRQQGMDRFYILLDFVRGKIKEKEKLSNLGVSLNLWRKREVFVVNCIIGNHL 180

Query: 663  GHKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSL 484
              KEFGVCLSLMK+LLSR   DPLL+SQLGY+QLQ+GDLEGAK SFLKVE  GKS+GS  
Sbjct: 181  SQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKVSFLKVEELGKSNGS-- 238

Query: 483  LSEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSD 304
            LSEVE +NLVNRNKALVY+VGKDYVSAVREYEECIERD+ADVVAVNNKALCLMYLRDLSD
Sbjct: 239  LSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSD 298

Query: 303  SIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCT 124
            SIKVLE+ALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLS+WIARVAPDDFDA+CT
Sbjct: 299  SIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDASCT 358

Query: 123  RT 118
            RT
Sbjct: 359  RT 360


>ref|XP_003538513.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Glycine max]
          Length = 361

 Score =  596 bits (1536), Expect = e-168
 Identities = 301/362 (83%), Positives = 328/362 (90%), Gaps = 1/362 (0%)
 Frame = -2

Query: 1200 MDSDSPRSESQTDPLLNSPEELCHDLHSLQDLAIRGAWRSIIDKVSRARALNLLQKPHDH 1021
            M+S+S  S+S+T PL +  ++ CHD+ SL++LA RGAWRSIIDKVSRARAL+LL KPHDH
Sbjct: 1    MESESSISDSETHPLSDQIDDACHDMSSLEELASRGAWRSIIDKVSRARALSLLHKPHDH 60

Query: 1020 LTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYRYETYPKIYPNRFGSMVPFSLRWLH 841
            LTYLAFNALAFTKLRRFNEASAELDS EDL SSHYRYETYPKIYPNR GSMVPFSLRW+H
Sbjct: 61   LTYLAFNALAFTKLRRFNEASAELDSLEDLHSSHYRYETYPKIYPNRIGSMVPFSLRWVH 120

Query: 840  ALIPIKLGQRQQGIDRLYRLLDFVREKINDK-KHNNLSISLGAWRRREVFVVNCIIGQHL 664
            ALIPIKLGQRQQG+DR Y LLDFVR KIN+K K NNL +SL  WR+REVFVVNCIIG HL
Sbjct: 121  ALIPIKLGQRQQGMDRFYILLDFVRGKINEKEKQNNLGVSLNLWRKREVFVVNCIIGNHL 180

Query: 663  GHKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVGDLEGAKASFLKVENEGKSDGSSL 484
              KEFGVCLSLMK+LLSR   DPLL+SQLGY+QLQ+GDLEGAK SFLKVE  GKS+  S 
Sbjct: 181  SQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKISFLKVEELGKSNNGS- 239

Query: 483  LSEVEVKNLVNRNKALVYMVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSD 304
            LSEVE +NLVNRNKALVY+VGKDYVSAVREYEECIERD+ADVVAVNNKALCLMYLRDLSD
Sbjct: 240  LSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSD 299

Query: 303  SIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCT 124
            SIKVLE+ALERVPTVALNETLVVNLCSMYELAYVNHSD+KRTLSSWIARVAPDDFDA+CT
Sbjct: 300  SIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDVKRTLSSWIARVAPDDFDASCT 359

Query: 123  RT 118
            RT
Sbjct: 360  RT 361


>ref|XP_004143481.1| PREDICTED: trafficking protein particle complex subunit 12-like
            [Cucumis sativus]
          Length = 387

 Score =  520 bits (1340), Expect = e-145
 Identities = 261/387 (67%), Positives = 311/387 (80%), Gaps = 6/387 (1%)
 Frame = -2

Query: 1263 DTESQTPVRSLSGNPIHSVGAMDSDSPRSESQTDPL---LNSPEELCHDLHSLQDLAIRG 1093
            +TES +P      +       + +        +DPL     S  +L HDL SLQDLA RG
Sbjct: 2    ETESPSPSPDSHSHSTSDPETLTTGFENLAISSDPLTTQFGSLNDLAHDLFSLQDLATRG 61

Query: 1092 AWRSIIDKVSRARALNLLQKPHDHLTYLAFNALAFTKLRRFNEASAELDSAEDLDSSHYR 913
            +WRSI+DKV+RARAL LLQKPHDHLTYL++N LA  KLRRF EA AELDS EDL+SS YR
Sbjct: 62   SWRSILDKVARARALTLLQKPHDHLTYLSYNVLALVKLRRFAEALAELDSLEDLNSSQYR 121

Query: 912  YETYPKIYPNRFGSMVPFSLRWLHALIPIKLGQRQQGIDRLYRLLDFVREKINDKKHNNL 733
            YE+YP +YPNR GSMVPFSLRWL ALIPIK+G+RQ G+DR Y LLDFV+ K+ DK+   L
Sbjct: 122  YESYPSVYPNRTGSMVPFSLRWLQALIPIKMGERQHGLDRFYELLDFVQSKLKDKEEKKL 181

Query: 732  SISLGAWRRREVFVVNCIIGQHLGHKEFGVCLSLMKDLLSRVDFDPLLISQLGYIQLQVG 553
             +S+  W++R VFV+NCIIG HL +KEFGVCL+L+ +LLS    DP LIS+LGYIQ+  G
Sbjct: 182  DVSVNLWKKRVVFVINCIIGHHLSNKEFGVCLTLINNLLSEDFSDPALISKLGYIQMHAG 241

Query: 552  DLEGAKASFLKVE---NEGKSDGSSLLSEVEVKNLVNRNKALVYMVGKDYVSAVREYEEC 382
            D+EGAK SF ++E    EGKS GS  LSEVE+KNLVNRNKALV++VGKDY+SAVREYEEC
Sbjct: 242  DIEGAKRSFNRIEELVKEGKSSGS--LSEVEMKNLVNRNKALVFLVGKDYLSAVREYEEC 299

Query: 381  IERDNADVVAVNNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYV 202
            IERDN+D+VA+NNKALCLMYLRDL+DSIKVLENALERVPTVALNET++VNLCSMYELAYV
Sbjct: 300  IERDNSDMVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYV 359

Query: 201  NHSDIKRTLSSWIARVAPDDFDATCTR 121
            NHS+IKRTL++WIARVAPDDFD++ TR
Sbjct: 360  NHSEIKRTLNNWIARVAPDDFDSSSTR 386


Top