BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010146
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   174   9e-42
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   162   2e-38
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      152   3e-35
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      148   5e-34
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              130   1e-28

>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/113 (70%), Positives = 96/113 (84%)
 Frame = -2

Query: 341 GAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 162
           GAPR+F+  +PTS NI++DPL N+FKD PDEQWIRAIDFTP S IGQSSA+CLELP+ + 
Sbjct: 178 GAPRVFENDVPTSTNIFDDPLFNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQ 237

Query: 161 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVN 3
            PNFRENFAYYEESE+QY L++G  FS+N  LVPIVAPP G++I +DILFKVN
Sbjct: 238 LPNFRENFAYYEESERQYTLQTGVPFSQNWGLVPIVAPPLGVKISYDILFKVN 290


>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1133

 Score =  162 bits (411), Expect = 2e-38
 Identities = 71/113 (62%), Positives = 90/113 (79%)
 Frame = -2

Query: 341 GAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 162
           GAPRI++  +P+S+N++EDPLLNYF+D PDEQW+R  DFTP   IG SS+LCLELP+   
Sbjct: 175 GAPRIYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQ 234

Query: 161 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVN 3
            PNF ENF YY+E+E  + LESG TFSRNPDLVPIV P  G+ +P++ILF+VN
Sbjct: 235 LPNFNENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVN 287


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/113 (61%), Positives = 88/113 (77%)
 Frame = -2

Query: 341 GAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 162
           GAPRI++  +P S  +++DPLLNYFKD PD+QW+R  DFT  +CIGQSS LCLELP +  
Sbjct: 174 GAPRIYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQ 233

Query: 161 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVN 3
            PNFRENFAYY+E+E +  LESG ++S N  LVPIV P + I++PF+ILFKVN
Sbjct: 234 LPNFRENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVN 286


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/113 (60%), Positives = 87/113 (76%)
 Frame = -2

Query: 341 GAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 162
           GAPRI++  +P S  +++DPLLNYFKD PD+QW+R  DFT  +CIGQSS L LELP +  
Sbjct: 174 GAPRIYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQ 233

Query: 161 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVN 3
            PNFRENFAYY+E+E +  LESG ++S N  LVPIV P + I++PF+ILFKVN
Sbjct: 234 LPNFRENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSRVIDLPFEILFKVN 286


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/113 (54%), Positives = 79/113 (69%)
 Frame = -2

Query: 341 GAPRIFKMVIPTSANIYEDPLLNYFKDTPDEQWIRAIDFTPCSCIGQSSALCLELPDDQD 162
           GAP+I++  +P         L  YFK+ PD+QW+R IDFTP   IGQS ALCLELP    
Sbjct: 139 GAPQIYEKDVPV--------LSYYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQ 190

Query: 161 FPNFRENFAYYEESEKQYALESGYTFSRNPDLVPIVAPPQGIEIPFDILFKVN 3
            PNFRENFAYY+E++ ++ LESG ++S N  LVPI+ PPQG  +PF ILFK+N
Sbjct: 191 LPNFRENFAYYKENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKIN 243