BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010145
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   254   1e-65
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   204   2e-50
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   203   3e-50
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      197   2e-48
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   194   1e-47

>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  254 bits (649), Expect = 1e-65
 Identities = 130/185 (70%), Positives = 152/185 (82%), Gaps = 3/185 (1%)
 Frame = +3

Query: 186 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 365
           MGKTIE+YGFP++V VS VK F+EQYTGE TVFAIK+R GKGRVPRAFAIIQFT+A  AT
Sbjct: 1   MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSAT 60

Query: 366 HMLSLAD---KSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLW 536
            M+S A+   ++L Y  SYLK RE+ERDIVPRPR FL SL++VKL FGCQISKGR SVLW
Sbjct: 61  SMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLW 120

Query: 537 KKVNDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGA 716
           KK  DV V+FG GMRK  F   H + +YKLELSYENIWKIEL++P+ ETT+YLLIQL GA
Sbjct: 121 KK-QDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGA 179

Query: 717 PRIFK 731
           PR+F+
Sbjct: 180 PRVFE 184


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  204 bits (518), Expect = 2e-50
 Identities = 96/182 (52%), Positives = 134/182 (73%)
 Frame = +3

Query: 186 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 365
           M KTI+VYGFPS V+   +K F+E+YTGE T+ A++I+Q +       A +QFTS + A 
Sbjct: 1   MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60

Query: 366 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 545
            +++L  K +WY  +YLK RE++ DI+P+PR FL S++ + L+FGCQ+S  R  VLWK +
Sbjct: 61  FIITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAI 120

Query: 546 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 725
           N VSV FG G+RK+ FFL HG  +YKLELSYENIW+I+L  P+G+ TK+LLIQL GAP+I
Sbjct: 121 N-VSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQI 179

Query: 726 FK 731
           ++
Sbjct: 180 YE 181


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  203 bits (516), Expect = 3e-50
 Identities = 100/182 (54%), Positives = 137/182 (75%)
 Frame = +3

Query: 186 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 365
           MGKTI+VYG PSNV+ + +K F+E+YTGE T+ A++I+Q K  V    A +QFTS + A 
Sbjct: 1   MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60

Query: 366 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 545
            ++SLA K LWY  +YLK RE++ DI+P+PRTFL S++ + L+FG Q+S  R  VLWK +
Sbjct: 61  LIISLA-KQLWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAI 119

Query: 546 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 725
           N VSV FG G+RK+ FFL HG  +YKLELS ENIW+I+L +P+G+ TK+LLIQL  AP+I
Sbjct: 120 N-VSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQI 178

Query: 726 FK 731
           ++
Sbjct: 179 YE 180


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  197 bits (501), Expect = 2e-48
 Identities = 101/182 (55%), Positives = 136/182 (74%)
 Frame = +3

Query: 186 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 365
           MGKTI+VYGF S+V+   VK F+E YTG ETV+A+KIRQ K +  RAFAI+QFT +  A 
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK-KSGRAFAIVQFTRSSDAG 59

Query: 366 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 545
            ++ LA++ L+Y  SYLK RE+E DIVP+PR FL ++  V + FGCQ+S+ +  VLW K 
Sbjct: 60  LIIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLW-KA 118

Query: 546 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 725
           ++V+++FG GMRK  F L +  +KYKLEL YENIW+IEL  P  +T+K+LLIQL GAPRI
Sbjct: 119 DNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRI 178

Query: 726 FK 731
           ++
Sbjct: 179 YE 180


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  194 bits (494), Expect = 1e-47
 Identities = 93/182 (51%), Positives = 131/182 (71%)
 Frame = +3

Query: 186 MGKTIEVYGFPSNVTVSLVKRFIEQYTGEETVFAIKIRQGKGRVPRAFAIIQFTSAKHAT 365
           MGKTI+V+GFP+ V+   VK+F+E+ TG  TV+AIK+RQ K   PR +AI+QFTS +H  
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 366 HMLSLADKSLWYSNSYLKVREVERDIVPRPRTFLDSLNNVKLYFGCQISKGRISVLWKKV 545
            +++ A + L+Y  SYLK  EVE+DIVP+PR  L +++ +K++FGCQ+S  +   LW   
Sbjct: 61  LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLW-SA 119

Query: 546 NDVSVDFGIGMRKWRFFLFHGDNKYKLELSYENIWKIELYQPQGETTKYLLIQLQGAPRI 725
            DV V FGIGMRK  F        Y+LELSYENIW+I+L+ PQG ++K+L+IQ+ GAP+I
Sbjct: 120 QDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKI 179

Query: 726 FK 731
           F+
Sbjct: 180 FE 181