BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010144
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   229   3e-58
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   189   3e-46
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      186   2e-45
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   184   8e-45
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      182   4e-44

>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  229 bits (583), Expect = 3e-58
 Identities = 122/185 (65%), Positives = 143/185 (77%), Gaps = 7/185 (3%)
 Frame = +1

Query: 25  MGKTIKVYGFPSHVIESLVKRFIEHYTGEETVFAIKIRQGK----RAFAFIQFTSAKHAT 192
           MGKTI++YGFP+ V  S VK F+E YTGE TVFAIK+R GK    RAFA IQFT+A  AT
Sbjct: 1   MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSAT 60

Query: 193 DMMSFPD---RSLWYGNSYLKVQEAERDVVPRPRTFLNSLNNVKLYFGCQISKGRISVLW 363
            MMS  +   R+L YG SYLK +E ERD+VPRPR FL+SL++VKL FGCQISKGR SVLW
Sbjct: 61  SMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLW 120

Query: 364 KKVNDVTVEFGIGMRKWRFFLFHGDNKYKLELSYENICKIELYQPQGETTKYLLIQLLGA 543
           KK  DV V FG GMRK  F   H + +YKLELSYENI KIEL++P+ ETT+YLLIQLLGA
Sbjct: 121 KK-QDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGA 179

Query: 544 PRIFK 558
           PR+F+
Sbjct: 180 PRVFE 184


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  189 bits (479), Expect = 3e-46
 Identities = 92/182 (50%), Positives = 133/182 (73%), Gaps = 4/182 (2%)
 Frame = +1

Query: 25  MGKTIKVYGFPSHVIESLVKRFIEHYTGEETVFAIKIRQGKRA----FAFIQFTSAKHAT 192
           M KTI+VYGFPS V    +K F+E YTGE T+ A++I+Q +       A +QFTS + A 
Sbjct: 1   MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60

Query: 193 DMMSFPDRSLWYGNSYLKVQEAERDVVPRPRTFLNSLNNVKLYFGCQISKGRISVLWKKV 372
            +++   + +WYG +YLK +E + D++P+PR FL+S++ + L+FGCQ+S  R  VLWK +
Sbjct: 61  FIITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAI 120

Query: 373 NDVTVEFGIGMRKWRFFLFHGDNKYKLELSYENICKIELYQPQGETTKYLLIQLLGAPRI 552
           N V+V+FG G+RK+ FFL HG  +YKLELSYENI +I+L  P+G+ TK+LLIQLLGAP+I
Sbjct: 121 N-VSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQI 179

Query: 553 FK 558
           ++
Sbjct: 180 YE 181


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  186 bits (473), Expect = 2e-45
 Identities = 97/181 (53%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
 Frame = +1

Query: 25  MGKTIKVYGFPSHVIESLVKRFIEHYTGEETVFAIKIRQGK---RAFAFIQFTSAKHATD 195
           MGKTI+VYGF S V    VK F+E YTG ETV+A+KIRQ K   RAFA +QFT +  A  
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGL 60

Query: 196 MMSFPDRSLWYGNSYLKVQEAERDVVPRPRTFLNSLNNVKLYFGCQISKGRISVLWKKVN 375
           ++   ++ L+YG SYLK +E E D+VP+PR FL+++  V + FGCQ+S+ +  VLW K +
Sbjct: 61  IIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLW-KAD 119

Query: 376 DVTVEFGIGMRKWRFFLFHGDNKYKLELSYENICKIELYQPQGETTKYLLIQLLGAPRIF 555
           +VT+ FG GMRK  F L +  +KYKLEL YENI +IEL  P  +T+K+LLIQL GAPRI+
Sbjct: 120 NVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIY 179

Query: 556 K 558
           +
Sbjct: 180 E 180


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  184 bits (467), Expect = 8e-45
 Identities = 92/182 (50%), Positives = 134/182 (73%), Gaps = 4/182 (2%)
 Frame = +1

Query: 25  MGKTIKVYGFPSHVIESLVKRFIEHYTGEETVFAIKIRQGKRAFAF----IQFTSAKHAT 192
           MGKTI+VYG PS+V  + +K F+E YTGE T+ A++I+Q K   +     +QFTS + A 
Sbjct: 1   MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60

Query: 193 DMMSFPDRSLWYGNSYLKVQEAERDVVPRPRTFLNSLNNVKLYFGCQISKGRISVLWKKV 372
            ++S   + LWYG +YLK +E + D++P+PRTFL+S++ + L+FG Q+S  R  VLWK +
Sbjct: 61  LIISLA-KQLWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAI 119

Query: 373 NDVTVEFGIGMRKWRFFLFHGDNKYKLELSYENICKIELYQPQGETTKYLLIQLLGAPRI 552
           N V+V+FG G+RK+ FFL HG  +YKLELS ENI +I+L +P+G+ TK+LLIQLL AP+I
Sbjct: 120 N-VSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQI 178

Query: 553 FK 558
           ++
Sbjct: 179 YE 180


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  182 bits (461), Expect = 4e-44
 Identities = 96/181 (53%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
 Frame = +1

Query: 25  MGKTIKVYGFPSHVIESLVKRFIEHYTGEETVFAIKIRQGK---RAFAFIQFTSAKHATD 195
           MGKTI+VYGF S V    VK F+E YTG ETV+A+KIRQ K   RAFA +QFT +  A  
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGL 60

Query: 196 MMSFPDRSLWYGNSYLKVQEAERDVVPRPRTFLNSLNNVKLYFGCQISKGRISVLWKKVN 375
           ++   ++ L+YG SYLK +E E D+VP+PR FL+++  V + F C +S+ +  VLWK  N
Sbjct: 61  IIRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADN 120

Query: 376 DVTVEFGIGMRKWRFFLFHGDNKYKLELSYENICKIELYQPQGETTKYLLIQLLGAPRIF 555
            VT+ FG GMRK  F L +  +KYKLEL YENI +IEL  P  +T+K+LLIQL GAPRI+
Sbjct: 121 -VTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIY 179

Query: 556 K 558
           +
Sbjct: 180 E 180