BLASTX nr result

ID: Glycyrrhiza23_contig00010060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010060
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...   195   8e-48
ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago ...   169   3e-40
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   140   2e-31
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   133   3e-29
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   112   7e-23

>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score =  195 bits (495), Expect = 8e-48
 Identities = 117/226 (51%), Positives = 151/226 (66%), Gaps = 5/226 (2%)
 Frame = -3

Query: 670 KIREEGHSLVCEITTFCKAIMNEYAIKLSLPRPTFNTVPQE--GLIPGFISSLVFNGTSY 497
           + R+EG SLV +I+ F K+IMNEYA KL + +PT+NT  Q+  G++P FI+SLVFNGTSY
Sbjct: 71  RTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFITSLVFNGTSY 130

Query: 496 TGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLYDAMKVQG---LQRSGV 326
           TGD A++KK+AEQ AA+AAILS++G+S SG +L +IIKSKS  YDA+K +G    Q S V
Sbjct: 131 TGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSKSIFYDAIKGKGRSLSQPSAV 190

Query: 325 SPVANTAHTSVMMNHKDKEVADPVGDNKNEDGTKVEFPESHGMLSPCQQAQVPKQESTLE 146
               N    S+ ++HKD EVA  V DN N + TKVEFPE   MLS CQ+ Q+  QES+LE
Sbjct: 191 LSTTNAGQISITLDHKDTEVAACVADNNNNE-TKVEFPEFPKMLSTCQELQMIHQESSLE 249

Query: 145 ATQSANESLQPGIEHPIVDGSSSXXXXXXXXXXXXKARMETQLSAV 8
           A    N SLQPG EH I + S+S            K R +T LS +
Sbjct: 250 AN---NVSLQPGSEHSIDNDSTSKKRKKNKKKSNKKLRSQTPLSPI 292


>ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago truncatula]
           gi|355517709|gb|AES99332.1| hypothetical protein
           MTR_5g079490 [Medicago truncatula]
          Length = 357

 Score =  169 bits (429), Expect = 3e-40
 Identities = 104/253 (41%), Positives = 151/253 (59%), Gaps = 32/253 (12%)
 Frame = -3

Query: 670 KIREEGHSLVCEITTFCKAIMNEYAIKLSLPRPTFNTVPQEGLIPGFISSLVFNGTSYTG 491
           K+++E +S++ E  TFCK ++NEYA KLS+  PT+ +V  + +IP F+ +L  NGTSYTG
Sbjct: 97  KVKDEAYSIMSEAVTFCKTVLNEYASKLSIQLPTYKSVEYKEVIPYFVCTLDLNGTSYTG 156

Query: 490 DAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLYDAMKVQGLQRSG----VS 323
           DAA+ KKDA +LAARAAILS+LGNS+SG++L QIIK+K+KL+D+ K + LQ +     V 
Sbjct: 157 DAARRKKDAVELAARAAILSILGNSNSGVLLAQIIKTKAKLFDSTKPKALQPTCDSVLVL 216

Query: 322 PVANTAHTSVMM---NHKDKEVADPVGDNKNED--------GTK---------------- 224
           P  ++  +S+++     KDK+VADP+ D+K +D        G K                
Sbjct: 217 PEESSERSSLLLQLFGAKDKDVADPLLDDKEKDKGVADPLFGAKGKVVTDPMGNDNINEI 276

Query: 223 -VEFPESHGMLSPCQQAQVPKQESTLEATQSANESLQPGIEHPIVDGSSSXXXXXXXXXX 47
            +  PES  ++S  QQ ++   E T EA +S+NE  QP +  PI  G S           
Sbjct: 277 EMACPESGPIISTSQQPEMQTHEPTPEAAKSSNEPEQPSVALPIDTGVSVKRRRRLKYKA 336

Query: 46  XXKARMETQLSAV 8
             KARME +L A+
Sbjct: 337 NKKARMEAELKAL 349


>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  140 bits (353), Expect = 2e-31
 Identities = 85/202 (42%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
 Frame = -3

Query: 670 KIREEGHSLVCEITTFCKAIMNEYAIKLSLPRPTFNTVPQEGLIPGFISSLVFNGTSYTG 491
           KI++EG  L+ E T FCK+I+NE+A+K++L +PT+ TV  EGL+P F+SSLVFNG +YTG
Sbjct: 92  KIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTG 151

Query: 490 DAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLYDAM---KVQGLQRSGVSP 320
           DA ++KK+AEQLAAR  ILS+LGNS SG +L +IIKSK KLY A+   K      +G+ P
Sbjct: 152 DAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPSYIHTGILP 211

Query: 319 VANTAHTSVMMNHKDKEVAD------PVGDNKNEDGTKVEFPESHGMLSPCQQAQVPKQE 158
           +  T+        K+ EVA       P   +    G  V  P +H    P  + + PK  
Sbjct: 212 IGLTSGIPPCKG-KEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTH---PPVHELEKPKPN 267

Query: 157 STLEATQSANESLQPGIEHPIV 92
            + E        +    E P+V
Sbjct: 268 VSSEVIAPPISFVPSVFEQPLV 289


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  133 bits (335), Expect = 3e-29
 Identities = 71/143 (49%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
 Frame = -3

Query: 670 KIREEGHSLVCEITTFCKAIMNEYAIKLSLPRPTFNTVPQEGLIPGFISSLVFNGTSYTG 491
           ++++EG  L+   T FCK+I+NE+A+K++  +PT+NTV   GL+P FIS+LVF+G SYTG
Sbjct: 209 RVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVFISTLVFDGVSYTG 268

Query: 490 DAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLY---DAMKVQGLQRSGVSP 320
           DA ++KK+AEQLAARA ILSL+GNS S  +L++IIKSKSKLY   D +K     +  + P
Sbjct: 269 DAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDRVKDPSHSQPNIVP 328

Query: 319 VA-NTAHTSVMMNHKDKEVADPV 254
           VA    H S     +++EV+  V
Sbjct: 329 VAVKVGHCSETTVDQEQEVSTAV 351


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  112 bits (280), Expect = 7e-23
 Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
 Frame = -3

Query: 670 KIREE--GHSLVCEITTFCKAIMNEYAIKLSLPRPTFNTVPQEGLIPGFISSLVFNGTSY 497
           KI++E        E T  CK+I+NEYA+K+ L  PT+NTV Q GL P F+SS VFNG +Y
Sbjct: 83  KIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLFPIFVSSSVFNGVTY 142

Query: 496 TGDAAKSKKDAEQLAARAAILSLLGNSDSGIMLFQIIKSKSKLY---DAMKVQGLQRSGV 326
            GD  ++KK+AEQLAARAA+LSLL N +SG ++ +  KSK KLY        Q  Q S +
Sbjct: 143 NGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLYVGFHKSDSQDAQNSNM 202

Query: 325 SPVANTAHTSVMM 287
             V     T  +M
Sbjct: 203 PVVGKDIKTEALM 215


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