BLASTX nr result

ID: Glycyrrhiza23_contig00010058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010058
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II su...   144   7e-33
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...   144   1e-32
gb|AFK46555.1| unknown [Lotus japonicus]                              140   8e-32
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   137   1e-30
gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK...   134   1e-29

>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Glycine
           max]
          Length = 116

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +1

Query: 1   RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFE 180
           RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLK+AFE
Sbjct: 47  RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFE 106

Query: 181 AEMLKFSRDY 210
           AEMLKFSRDY
Sbjct: 107 AEMLKFSRDY 116


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +1

Query: 1   RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFE 180
           RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQS+NDLDRELDHLK+AFE
Sbjct: 47  RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFE 106

Query: 181 AEMLKFSRDY 210
           AEMLKFSRDY
Sbjct: 107 AEMLKFSRDY 116


>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = +1

Query: 1   RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFE 180
           RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHT SQSSPMQAYNQSINDLD+ELDHLKNAFE
Sbjct: 47  RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFE 106

Query: 181 AEMLKFSRDY 210
           A+ML+FSRDY
Sbjct: 107 ADMLRFSRDY 116


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/70 (92%), Positives = 67/70 (95%)
 Frame = +1

Query: 1   RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFE 180
           RMQLHRD NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQ+INDLD+ELDHLKNAFE
Sbjct: 47  RMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106

Query: 181 AEMLKFSRDY 210
           AE  KFSRDY
Sbjct: 107 AEFAKFSRDY 116


>gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK47762.1| unknown
           [Medicago truncatula]
          Length = 116

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/70 (88%), Positives = 68/70 (97%)
 Frame = +1

Query: 1   RMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFE 180
           RMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSPMQAYNQSINDLD+ELD LK+ FE
Sbjct: 47  RMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 106

Query: 181 AEMLKFSRDY 210
           AE+LKFS+DY
Sbjct: 107 AELLKFSKDY 116


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