BLASTX nr result

ID: Glycyrrhiza23_contig00010036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010036
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611508.1| Malate dehydrogenase, glyoxysomal [Medicago ...   567   e-159
gb|AAB99754.1| malate dehydrogenase precursor [Medicago sativa]       565   e-158
ref|XP_002263670.2| PREDICTED: malate dehydrogenase, glyoxysomal...   551   e-154
ref|XP_003539223.1| PREDICTED: malate dehydrogenase, glyoxysomal...   540   e-151
pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysom...   539   e-151

>ref|XP_003611508.1| Malate dehydrogenase, glyoxysomal [Medicago truncatula]
            gi|355512843|gb|AES94466.1| Malate dehydrogenase,
            glyoxysomal [Medicago truncatula]
          Length = 358

 Score =  567 bits (1462), Expect = e-159
 Identities = 295/360 (81%), Positives = 311/360 (86%), Gaps = 1/360 (0%)
 Frame = +1

Query: 202  MDPNSDANERIARIASHLHPPNLKM-EDGSSCGSLRSGHCRAKGGAPGFKVAILGAAGGI 378
            M+PNS AN RI RIASHL+PPNLKM E G S  SL + HCRAKGG+PGFKVAILGAAGGI
Sbjct: 1    MEPNSYANSRITRIASHLNPPNLKMNEHGGS--SLTNVHCRAKGGSPGFKVAILGAAGGI 58

Query: 379  GQPLAMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQNQLEDALTGMDLV 558
            GQPL+MLMK+NPLVSVLHLYDVVNTPGVT+DISHMDT AVVRGFLGQNQLEDALTGMDLV
Sbjct: 59   GQPLSMLMKINPLVSVLHLYDVVNTPGVTSDISHMDTSAVVRGFLGQNQLEDALTGMDLV 118

Query: 559  IIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNLISNPVNSTVPIAAEVFK 738
            IIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAK CPKAIVNLISNPVNSTVPIAAEVFK
Sbjct: 119  IIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKQCPKAIVNLISNPVNSTVPIAAEVFK 178

Query: 739  RAGTYDPRKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGITILPLLSQVKPPC 918
            RAGTYDP++LLGVTMLDVVRANTFVAE                HAGITILPLLSQVKPP 
Sbjct: 179  RAGTYDPKRLLGVTMLDVVRANTFVAEVMGLDPRDVDVPVVGGHAGITILPLLSQVKPPS 238

Query: 919  SFTPKEVEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRAMRGEAGIIQCA 1098
            SFTPKE+EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD CLRA++GEA I+QCA
Sbjct: 239  SFTPKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRALKGEADIVQCA 298

Query: 1099 YVDSQVTELPFFASKVRLGRDGVEEFLPLGPLNDYXXXXXXXXXXXXXXXXXXGISFIRK 1278
            YVDSQVTELPFFASKVRLGR+GVEEFLPLGPL+DY                  G+SFIRK
Sbjct: 299  YVDSQVTELPFFASKVRLGRNGVEEFLPLGPLSDYERASLEKAKKELATSVEKGVSFIRK 358


>gb|AAB99754.1| malate dehydrogenase precursor [Medicago sativa]
          Length = 358

 Score =  565 bits (1456), Expect = e-158
 Identities = 296/360 (82%), Positives = 309/360 (85%), Gaps = 1/360 (0%)
 Frame = +1

Query: 202  MDPNSDANERIARIASHLHPPNLKM-EDGSSCGSLRSGHCRAKGGAPGFKVAILGAAGGI 378
            M+PNS AN RI RIASHL+PPNLKM E G S  SL + HCRAKGG PGFKVAILGAAGGI
Sbjct: 1    MEPNSYANSRITRIASHLNPPNLKMNEHGGS--SLTNVHCRAKGGTPGFKVAILGAAGGI 58

Query: 379  GQPLAMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQNQLEDALTGMDLV 558
            GQPL+MLMKMN LVSVLHLYDVVNTPGVT+DISHMDT AVVRGFLGQNQLEDALTGMDLV
Sbjct: 59   GQPLSMLMKMNLLVSVLHLYDVVNTPGVTSDISHMDTSAVVRGFLGQNQLEDALTGMDLV 118

Query: 559  IIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNLISNPVNSTVPIAAEVFK 738
            IIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAK CPKAIVNLISNPVNSTVPIAAEVFK
Sbjct: 119  IIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKRCPKAIVNLISNPVNSTVPIAAEVFK 178

Query: 739  RAGTYDPRKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGITILPLLSQVKPPC 918
            RAGTYDP++LLGVTMLDVVRANTFVAE                HAGITILPLLSQVKPP 
Sbjct: 179  RAGTYDPKRLLGVTMLDVVRANTFVAEVMGLDPRDVDVPVVGGHAGITILPLLSQVKPPS 238

Query: 919  SFTPKEVEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRAMRGEAGIIQCA 1098
            SFTPKE+EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD CLRA++GEA IIQCA
Sbjct: 239  SFTPKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRALKGEADIIQCA 298

Query: 1099 YVDSQVTELPFFASKVRLGRDGVEEFLPLGPLNDYXXXXXXXXXXXXXXXXXXGISFIRK 1278
            YVDSQVTELPFFASKVRLGR+GVEEFLPLGPL+DY                  G+SFIRK
Sbjct: 299  YVDSQVTELPFFASKVRLGRNGVEEFLPLGPLSDYERASLEKAKKELATSVEKGVSFIRK 358


>ref|XP_002263670.2| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera]
            gi|297739396|emb|CBI29427.3| unnamed protein product
            [Vitis vinifera]
          Length = 356

 Score =  551 bits (1419), Expect = e-154
 Identities = 284/359 (79%), Positives = 302/359 (84%)
 Frame = +1

Query: 202  MDPNSDANERIARIASHLHPPNLKMEDGSSCGSLRSGHCRAKGGAPGFKVAILGAAGGIG 381
            M P SDAN+RIARI++HL P N +M  G S G  R  +CRAKGGAPGFKVAILGAAGGIG
Sbjct: 1    MHPTSDANQRIARISAHLQPSNFQM--GESSGLSRE-NCRAKGGAPGFKVAILGAAGGIG 57

Query: 382  QPLAMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQNQLEDALTGMDLVI 561
            QPLAMLMKMNPLVSVLHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLEDALTGMDLVI
Sbjct: 58   QPLAMLMKMNPLVSVLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALTGMDLVI 117

Query: 562  IPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNLISNPVNSTVPIAAEVFKR 741
            IPAGVPRKPGMTRDDLFNINAGIVKTLCE IAKCCP AIVNLISNPVNSTVPIAAEVFK+
Sbjct: 118  IPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKK 177

Query: 742  AGTYDPRKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGITILPLLSQVKPPCS 921
            AGT+DP++LLGVTMLDVVRANTFVAE                HAG+TILPLLSQVKPPCS
Sbjct: 178  AGTFDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPCS 237

Query: 922  FTPKEVEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRAMRGEAGIIQCAY 1101
            FTP+E++YLT RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLR +RG+AG+IQCAY
Sbjct: 238  FTPEEIDYLTARIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRGLRGDAGVIQCAY 297

Query: 1102 VDSQVTELPFFASKVRLGRDGVEEFLPLGPLNDYXXXXXXXXXXXXXXXXXXGISFIRK 1278
            V SQVTELPFFASKVRLGR G EE  PLGPLN+Y                  GISFIRK
Sbjct: 298  VFSQVTELPFFASKVRLGRTGAEEIYPLGPLNEYERAGLEKAKKELASSIQKGISFIRK 356


>ref|XP_003539223.1| PREDICTED: malate dehydrogenase, glyoxysomal [Glycine max]
          Length = 353

 Score =  540 bits (1392), Expect = e-151
 Identities = 281/359 (78%), Positives = 297/359 (82%)
 Frame = +1

Query: 202  MDPNSDANERIARIASHLHPPNLKMEDGSSCGSLRSGHCRAKGGAPGFKVAILGAAGGIG 381
            M+ NS A++RI+RIA HL P      +   C  L+   CRAKGG  GFKVAILGAAGGIG
Sbjct: 1    MEANSGASDRISRIAGHLRP----QREDDVC--LKRSDCRAKGGVSGFKVAILGAAGGIG 54

Query: 382  QPLAMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQNQLEDALTGMDLVI 561
            QPLAMLMKMNPLVS+LHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLEDAL GMDLVI
Sbjct: 55   QPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVI 114

Query: 562  IPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNLISNPVNSTVPIAAEVFKR 741
            IPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVN+ISNPVNSTVPIAAEVFKR
Sbjct: 115  IPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVISNPVNSTVPIAAEVFKR 174

Query: 742  AGTYDPRKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGITILPLLSQVKPPCS 921
            AGTYDP++LLGVTMLDVVRANTFVAE                HAGITILPLLSQ+KPPCS
Sbjct: 175  AGTYDPKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCS 234

Query: 922  FTPKEVEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRAMRGEAGIIQCAY 1101
            FTPKE+EYLT RIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD CL A+RG+AGII+CAY
Sbjct: 235  FTPKEIEYLTGRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAY 294

Query: 1102 VDSQVTELPFFASKVRLGRDGVEEFLPLGPLNDYXXXXXXXXXXXXXXXXXXGISFIRK 1278
            V SQVTELPFFASKVRLGR GVEE LPLGPLNDY                  GISFIRK
Sbjct: 295  VASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353


>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate
            Dehydrogenase Have Different Activities And Stabilities
            But Similar Crystal Structures gi|60593476|pdb|1SEV|B
            Chain B, Mature And Translocatable Forms Of Glyoxysomal
            Malate Dehydrogenase Have Different Activities And
            Stabilities But Similar Crystal Structures
          Length = 362

 Score =  539 bits (1388), Expect = e-151
 Identities = 273/358 (76%), Positives = 298/358 (83%)
 Frame = +1

Query: 202  MDPNSDANERIARIASHLHPPNLKMEDGSSCGSLRSGHCRAKGGAPGFKVAILGAAGGIG 381
            M P  D N+RIARI++HLHPP  +ME+ S+   LR  +CRAKGGAPGFKVAILGAAGGIG
Sbjct: 1    MQPIPDVNQRIARISAHLHPPKSQMEESSA---LRRANCRAKGGAPGFKVAILGAAGGIG 57

Query: 382  QPLAMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQNQLEDALTGMDLVI 561
            QPLAMLMKMNPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I
Sbjct: 58   QPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLII 117

Query: 562  IPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNLISNPVNSTVPIAAEVFKR 741
            +PAGVPRKPGMTRDDLF INAGIVKTLCE IAKCCP+AIVNLISNPVNSTVPIAAEVFK+
Sbjct: 118  VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKK 177

Query: 742  AGTYDPRKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGITILPLLSQVKPPCS 921
            AGTYDP++LLGVTMLDVVRANTFVAE                HAG+TILPLLSQVKPP S
Sbjct: 178  AGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSS 237

Query: 922  FTPKEVEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRAMRGEAGIIQCAY 1101
            FT +E+ YLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD CLR +RG+AG+I+CA+
Sbjct: 238  FTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAF 297

Query: 1102 VDSQVTELPFFASKVRLGRDGVEEFLPLGPLNDYXXXXXXXXXXXXXXXXXXGISFIR 1275
            V SQVTELPFFASKVRLGR+G+EE   LGPLN+Y                  G+SFIR
Sbjct: 298  VSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355


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