BLASTX nr result

ID: Glycyrrhiza23_contig00010014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00010014
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...   362   1e-97
ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Gly...   352   1e-94
ref|XP_003596861.1| F-box family protein [Medicago truncatula] g...   322   8e-86
gb|AFK33432.1| unknown [Medicago truncatula]                          321   2e-85
ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...   293   5e-77

>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score =  362 bits (928), Expect = 1e-97
 Identities = 179/275 (65%), Positives = 208/275 (75%), Gaps = 6/275 (2%)
 Frame = -1

Query: 807 SSSGPTITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXLCTEHHLWHNICAATWPSLN 628
           +SS   ITTVHPDI QSHIL RLDG               LCTEHHLW NICAATWPSLN
Sbjct: 39  TSSSSDITTVHPDIFQSHILNRLDGPTLASAASATSHLRGLCTEHHLWRNICAATWPSLN 98

Query: 627 DPIATALISTFPATHRSVXXXXXXXXXXXXXXXHHR---TPPPEELISAVDIYYEGKPVF 457
           DP+A A I+TFPATHRS+                     TPPP ELISAVDIYY+GKPVF
Sbjct: 99  DPLAAATIATFPATHRSIFSDSFPSLHHSPPNPIPTQPPTPPPPELISAVDIYYKGKPVF 158

Query: 456 SKVLRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDD---VLEHLEENLGLSWIIID 286
           S+V+RT+THKGWFLCSPLW+DLL+P E+VPTP+K AQ +D   +L HL ENL LSWIIID
Sbjct: 159 SRVIRTETHKGWFLCSPLWVDLLDPTEVVPTPLKFAQTNDEIELLNHLVENLALSWIIID 218

Query: 285 PTRKRSANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVS 106
           PTRKR+ANLSSR PV+ +RHWLT +LEVL++V  +  VQC +KVTCCGK GG MHVREVS
Sbjct: 219 PTRKRAANLSSRRPVSARRHWLTAELEVLYAVP-METVQCVVKVTCCGKVGGAMHVREVS 277

Query: 105 LSMEDTEGRHVMGRESMVILQGAMENGERKRVDGE 1
           L+MEDTEGRHVMGR+ +VILQ AMENG+R+++D E
Sbjct: 278 LTMEDTEGRHVMGRDGVVILQDAMENGKREKLDAE 312


>ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 326

 Score =  352 bits (902), Expect = 1e-94
 Identities = 174/272 (63%), Positives = 209/272 (76%), Gaps = 5/272 (1%)
 Frame = -1

Query: 807 SSSGPTITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXLCTEHHLWHNICAATWPSLN 628
           +S    ITTVHPDI QSHIL RLDG               LCTEHHLW NI AATWPSLN
Sbjct: 4   TSFSSDITTVHPDIFQSHILNRLDGPTLASAASSTSHLRRLCTEHHLWRNISAATWPSLN 63

Query: 627 DPIATALISTFPATHRSVXXXXXXXXXXXXXXXHHRTPPPE--ELISAVDIYYEGKPVFS 454
           DP+A A+I+TFPA HRS+               +   PPP   ELISAVD+YY+GKPVFS
Sbjct: 64  DPLAAAIITTFPARHRSIFSDSFPSLHHSPPNLNPTPPPPPPPELISAVDLYYKGKPVFS 123

Query: 453 KVLRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDD---VLEHLEENLGLSWIIIDP 283
           +V++T+THKGWFLCSPLW+DLL+ +E+VPTP+K AQ +D   +L HL+ENL LSWIIIDP
Sbjct: 124 RVIKTETHKGWFLCSPLWVDLLDRNEVVPTPLKFAQTNDENKLLNHLDENLTLSWIIIDP 183

Query: 282 TRKRSANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSL 103
           TRKR+ANLSSR PVAV+RHWLT +L+VL++V  +  VQC +KVTCCGKAGG MHVREVSL
Sbjct: 184 TRKRAANLSSRRPVAVRRHWLTAELQVLYAVP-METVQCVVKVTCCGKAGGAMHVREVSL 242

Query: 102 SMEDTEGRHVMGRESMVILQGAMENGERKRVD 7
           +MEDTEGRHVMG++S+VILQ AMENG+RK++D
Sbjct: 243 TMEDTEGRHVMGKDSVVILQDAMENGKRKKLD 274


>ref|XP_003596861.1| F-box family protein [Medicago truncatula]
           gi|355485909|gb|AES67112.1| F-box family protein
           [Medicago truncatula]
          Length = 321

 Score =  322 bits (826), Expect = 8e-86
 Identities = 160/267 (59%), Positives = 196/267 (73%), Gaps = 6/267 (2%)
 Frame = -1

Query: 789 ITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXLCTEHHLWHNICAATWPSLNDPIATA 610
           ITT+HP I+QSHIL+RLDG               LCTEHHLW  I  +TWPSLN+P AT+
Sbjct: 5   ITTIHPYILQSHILSRLDGTSLTSVSSTATHLHNLCTEHHLWQKIITSTWPSLNNPSATS 64

Query: 609 LISTFPATHRSVXXXXXXXXXXXXXXXHHRTPP------PEELISAVDIYYEGKPVFSKV 448
           LISTFP++HRS+                  +        P+EL SAVD+YY+G+PVFSK+
Sbjct: 65  LISTFPSSHRSIFSDSFPSIHYSSSSSDTSSSSSLALSAPKELFSAVDLYYKGRPVFSKL 124

Query: 447 LRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDVLEHLEENLGLSWIIIDPTRKRS 268
           LRT+THKGWFLCSPLWI++LEP+E++ T +K  QN DV+E LE+NL LSWIII+PTRKRS
Sbjct: 125 LRTETHKGWFLCSPLWIEILEPNEIIETNIKFEQN-DVVEWLEQNLSLSWIIIEPTRKRS 183

Query: 267 ANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSLSMEDT 88
            NLSSRLPV V+RHWLTG+LEVL+  V +G VQC +KVTCCGK GGEMHV  VS SMED 
Sbjct: 184 VNLSSRLPVTVRRHWLTGELEVLYGTV-MGMVQCMVKVTCCGKVGGEMHVTGVSFSMEDM 242

Query: 87  EGRHVMGRESMVILQGAMENGERKRVD 7
           +GRH++GR+S+ IL GAME GER +VD
Sbjct: 243 DGRHLIGRDSLGILVGAMEKGERWKVD 269


>gb|AFK33432.1| unknown [Medicago truncatula]
          Length = 321

 Score =  321 bits (823), Expect = 2e-85
 Identities = 159/267 (59%), Positives = 196/267 (73%), Gaps = 6/267 (2%)
 Frame = -1

Query: 789 ITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXLCTEHHLWHNICAATWPSLNDPIATA 610
           ITT+HP I+QSHIL+RLDG               LCTEHHLW  I  +TWPSLN+P AT+
Sbjct: 5   ITTIHPYILQSHILSRLDGTSLTSVSSTATHLHNLCTEHHLWQKIITSTWPSLNNPSATS 64

Query: 609 LISTFPATHRSVXXXXXXXXXXXXXXXHHRTPP------PEELISAVDIYYEGKPVFSKV 448
           LISTFP++HRS+                  +        P+EL SAVD+YY+G+PVFSK+
Sbjct: 65  LISTFPSSHRSIFSDSFPSIHYSSSSSDTSSSSSLALSAPKELFSAVDLYYKGRPVFSKL 124

Query: 447 LRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDVLEHLEENLGLSWIIIDPTRKRS 268
           LRT+THKGWFLCSPLWI++LEP+E++ T +K  QN DV+E LE+NL LSWIII+PTRKRS
Sbjct: 125 LRTETHKGWFLCSPLWIEILEPNEIIETNIKFEQN-DVVEWLEQNLSLSWIIIEPTRKRS 183

Query: 267 ANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSLSMEDT 88
            NLS+RLPV V+RHWLTG+LEVL+  V +G VQC +KVTCCGK GGEMHV  VS SMED 
Sbjct: 184 VNLSNRLPVTVRRHWLTGELEVLYGTV-MGMVQCMVKVTCCGKVGGEMHVTGVSFSMEDI 242

Query: 87  EGRHVMGRESMVILQGAMENGERKRVD 7
           +GRH++GR+S+ IL GAME GER +VD
Sbjct: 243 DGRHLIGRDSLGILVGAMEKGERWKVD 269


>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score =  293 bits (750), Expect = 5e-77
 Identities = 150/275 (54%), Positives = 185/275 (67%), Gaps = 8/275 (2%)
 Frame = -1

Query: 807 SSSGPTITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXLCTEHHLWHNICAATWPSLN 628
           + S  ++ T+H DII +HILTRLDG               LCT+  LW  I  ATWPSL 
Sbjct: 17  TESTSSLATLHSDIIHAHILTRLDGATLASAASVSSLMHRLCTQDDLWREISTATWPSLQ 76

Query: 627 DPIATALISTFPATHRSVXXXXXXXXXXXXXXXHHRTPPPEELISAVDIYYEGKPVFSKV 448
           +PIA  +IS  P  +RS+               H   PP  ELISAVD+YY+GKPVFS+V
Sbjct: 77  NPIARHVISAIPGGYRSIFSDAFPSLHNSSFRRHRPPPPTPELISAVDMYYQGKPVFSRV 136

Query: 447 LRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDV-LEHLEENLGLSWIIIDPTRKR 271
           +RT+T K WF  SPLWID L+  EL+PT VK A+ D+  L+HLEENL +SWII+DPTRKR
Sbjct: 137 IRTETQKNWFFASPLWIDALQHKELIPTTVKFARKDEEWLKHLEENLSVSWIIVDPTRKR 196

Query: 270 SANLSSRLPVAVQRHWLTGDLEVLFSVVLLGA-------VQCTIKVTCCGKAGGEMHVRE 112
           +AN+SSR  V  QRHWLT ++EV+++  + G        VQC +KVTCCGK GGE+HVRE
Sbjct: 197 AANVSSRRAVLAQRHWLTREVEVVYAAEMAGERGGATERVQCLVKVTCCGKVGGELHVRE 256

Query: 111 VSLSMEDTEGRHVMGRESMVILQGAMENGERKRVD 7
           V+L MEDTEGR V G+ES+ ILQ AMENGERKRVD
Sbjct: 257 VNLVMEDTEGRRVSGKESVEILQRAMENGERKRVD 291


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