BLASTX nr result

ID: Glycyrrhiza23_contig00009975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009975
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35928.1| unknown [Lotus japonicus]                              216   6e-69
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin...   218   8e-69
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin...   216   5e-68
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ...   213   5e-68
ref|XP_002307132.1| predicted protein [Populus trichocarpa] gi|2...   212   1e-66

>gb|AFK35928.1| unknown [Lotus japonicus]
          Length = 138

 Score =  216 bits (551), Expect(2) = 6e-69
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -2

Query: 794 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 615
           MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQ+SDDPMNQVSQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60

Query: 614 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 468
           YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 109



 Score = 71.6 bits (174), Expect(2) = 6e-69
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 411 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 304
           EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE
Sbjct: 103 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138


>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
           gi|255625623|gb|ACU13156.1| unknown [Glycine max]
          Length = 138

 Score =  218 bits (554), Expect(2) = 8e-69
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -2

Query: 794 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 615
           MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60

Query: 614 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 468
           YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 109



 Score = 70.1 bits (170), Expect(2) = 8e-69
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = -1

Query: 411 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 304
           EEAIAMVPSIK+RGRAQDDEAIEKMLNDLSLIKKFE
Sbjct: 103 EEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIKKFE 138


>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
           gi|255632071|gb|ACU16388.1| unknown [Glycine max]
          Length = 138

 Score =  216 bits (551), Expect(2) = 5e-68
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -2

Query: 794 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 615
           MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 614 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 468
           YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIA+V
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVV 109



 Score = 68.6 bits (166), Expect(2) = 5e-68
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = -1

Query: 411 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 304
           EEAIA+VPSIK+RGRAQDDEAIEKMLNDLSLIKKFE
Sbjct: 103 EEAIAVVPSIKSRGRAQDDEAIEKMLNDLSLIKKFE 138


>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
           gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
           II subunit RPB4 [Medicago truncatula]
           gi|388497296|gb|AFK36714.1| unknown [Medicago
           truncatula]
          Length = 138

 Score =  213 bits (543), Expect(2) = 5e-68
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = -2

Query: 794 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 615
           MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQ+SDD MNQVSQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60

Query: 614 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 468
           YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 109



 Score = 71.6 bits (174), Expect(2) = 5e-68
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = -1

Query: 411 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 304
           EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE
Sbjct: 103 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 138


>ref|XP_002307132.1| predicted protein [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| predicted protein
           [Populus trichocarpa] gi|222853507|gb|EEE91054.1|
           predicted protein [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  212 bits (540), Expect(2) = 1e-66
 Identities = 105/109 (96%), Positives = 108/109 (99%)
 Frame = -2

Query: 794 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 615
           MSGEEEENAAELKIGD+FLKAKCLMNCEV+LILEHKYEQLQQ SDDPMNQVSQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 614 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMV 468
           YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMV
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMV 109



 Score = 68.6 bits (166), Expect(2) = 1e-66
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = -1

Query: 411 EEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKKFE 304
           EEAIAMVPSIKT+GRA DDEAIEKMLNDLSLIKKFE
Sbjct: 103 EEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKKFE 138


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