BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009941
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   353   2e-95
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              259   5e-67
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   259   5e-67
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   255   9e-66
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   253   3e-65

>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  353 bits (907), Expect = 2e-95
 Identities = 188/304 (61%), Positives = 223/304 (73%), Gaps = 3/304 (0%)
 Frame = +1

Query: 1    DGDMYWVSKNPQLLQYFRKSDPWMESPAPFNSVRLDSSVKNPRALSTXXXXXXXXXXXXX 180
            DGD YWVS +PQLLQYFRK DPW+E     NSV LDSSVK P   S              
Sbjct: 657  DGDTYWVSNHPQLLQYFRKGDPWIE-----NSVPLDSSVKKPSEFSPEELEEELFRLFLK 711

Query: 181  NRFQSSFAIGMAADSWMTHMDRLLTLRNHHTEEKEKQRVQENILKLINIYYEALDAPKKG 360
             RFQ S+A+GM+ +SWM  MDRLLTL N+ T E EK+RV+EN+LKLI+IYYEALDAPK G
Sbjct: 712  TRFQPSYAMGMSENSWMALMDRLLTL-NNCTNENEKERVKENMLKLIDIYYEALDAPKSG 770

Query: 361  GGKVQVPNDLAVEMFPHYMERDRLFTSTSILGLIYDEVIRCQTNDDMSAKEIRKLPCFDV 540
              KVQVPNDL  E+FPHYME+D+ FTSTSILGLIYDEV     ND +   EI KLPCFDV
Sbjct: 771  R-KVQVPNDLIAELFPHYMEKDKSFTSTSILGLIYDEVEIWLENDMVG--EIWKLPCFDV 827

Query: 541  EIPISCMEKWEALYKEYRKDMTTALN--DHSNANEKAAEVNQIYKQKLYGAA-SMEDSPK 711
            E+P SC+EKW+  Y+EYRKDMT ALN  D S ++E+AAEVN+ YK++ YG    ME   K
Sbjct: 828  EVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLK 887

Query: 712  SISGIYNEALAVYHITYDYAIQMNSVEKCGFAWKVAGSALTSLYAINQNPKALTCTPSVL 891
            SI  I+NEALAVY+++Y+YA+    V++CGFAWK+AGSALT LY I QN KAL C PSV+
Sbjct: 888  SIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCDPSVV 947

Query: 892  REIF 903
            REIF
Sbjct: 948  REIF 951


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  259 bits (663), Expect = 5e-67
 Identities = 143/303 (47%), Positives = 190/303 (62%), Gaps = 2/303 (0%)
 Frame = +1

Query: 1    DGDMYWVSKNPQLLQYFRKSDPWMESPAPFNSVRLDSSVKNPRALSTXXXXXXXXXXXXX 180
            DGDMYWVS+N QLLQYFR S+PWM       S R   S K P   S              
Sbjct: 635  DGDMYWVSRNQQLLQYFRASEPWMRK----RSTRHVPS-KRPTDFSPDELEHELFQLFLT 689

Query: 181  NRFQSSFAIGMAADSWMTHMDRLLTLRNHHTEEKEKQRVQENILKLINIYYEALDAPKKG 360
             RFQ+S AIGMAAD+W+  MDRLLTLR+  ++EKE   ++  +L+L +IYY+ALDAPK G
Sbjct: 690  TRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKEC--LKRKMLELTDIYYDALDAPKSG 747

Query: 361  GGKVQVPNDLAVEMFPHYMERDRLFTSTSILGLIYDEVIRCQTNDDMSAKEIRKLPCFDV 540
              KV V  +L  E FPH+M R+  + STSILG IYD V   Q  ++ S KEI +LP F++
Sbjct: 748  M-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQP-ENQSTKEIWRLPLFNI 805

Query: 541  E-IPISCMEKWEALYKEYRKDMTTALNDHSNA-NEKAAEVNQIYKQKLYGAASMEDSPKS 714
            + +P +C+  W+  Y +YR +M  AL       +E AAEV   YKQ LYGAA  E+SP++
Sbjct: 806  DAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRN 865

Query: 715  ISGIYNEALAVYHITYDYAIQMNSVEKCGFAWKVAGSALTSLYAINQNPKALTCTPSVLR 894
            +  I++EALA+YH+TY++ I    V  C F W+VAG AL  LY +    K++ C PSVLR
Sbjct: 866  LEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLR 925

Query: 895  EIF 903
            ++F
Sbjct: 926  QVF 928


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  259 bits (663), Expect = 5e-67
 Identities = 143/303 (47%), Positives = 190/303 (62%), Gaps = 2/303 (0%)
 Frame = +1

Query: 1    DGDMYWVSKNPQLLQYFRKSDPWMESPAPFNSVRLDSSVKNPRALSTXXXXXXXXXXXXX 180
            DGDMYWVS+N QLLQYFR S+PWM       S R   S K P   S              
Sbjct: 649  DGDMYWVSRNQQLLQYFRASEPWMRK----RSTRHVPS-KRPTDFSPDELEHELFQLFLT 703

Query: 181  NRFQSSFAIGMAADSWMTHMDRLLTLRNHHTEEKEKQRVQENILKLINIYYEALDAPKKG 360
             RFQ+S AIGMAAD+W+  MDRLLTLR+  ++EKE   ++  +L+L +IYY+ALDAPK G
Sbjct: 704  TRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKEC--LKRKMLELTDIYYDALDAPKSG 761

Query: 361  GGKVQVPNDLAVEMFPHYMERDRLFTSTSILGLIYDEVIRCQTNDDMSAKEIRKLPCFDV 540
              KV V  +L  E FPH+M R+  + STSILG IYD V   Q  ++ S KEI +LP F++
Sbjct: 762  M-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQP-ENQSTKEIWRLPLFNI 819

Query: 541  E-IPISCMEKWEALYKEYRKDMTTALNDHSNA-NEKAAEVNQIYKQKLYGAASMEDSPKS 714
            + +P +C+  W+  Y +YR +M  AL       +E AAEV   YKQ LYGAA  E+SP++
Sbjct: 820  DAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRN 879

Query: 715  ISGIYNEALAVYHITYDYAIQMNSVEKCGFAWKVAGSALTSLYAINQNPKALTCTPSVLR 894
            +  I++EALA+YH+TY++ I    V  C F W+VAG AL  LY +    K++ C PSVLR
Sbjct: 880  LEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLR 939

Query: 895  EIF 903
            ++F
Sbjct: 940  QVF 942


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  255 bits (652), Expect = 9e-66
 Identities = 142/303 (46%), Positives = 188/303 (62%), Gaps = 2/303 (0%)
 Frame = +1

Query: 1    DGDMYWVSKNPQLLQYFRKSDPWMESPAPFNSVRLDSSVKNPRALSTXXXXXXXXXXXXX 180
            DGDMYWVS+N QLL+YFR  +PW  SP    S  + ++ K P+  S              
Sbjct: 763  DGDMYWVSRNSQLLEYFRPCEPWRPSP----STEVVTN-KKPKEFSADELENELFKLFLS 817

Query: 181  NRFQSSFAIGMAADSWMTHMDRLLTLRNHHTEEKEKQRVQENILKLINIYYEALDAPKKG 360
             RFQ S+A  +AAD+W+  MD+ L L     EE+   R +  IL+LINIYY+ALDAPKKG
Sbjct: 818  TRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAK--ILQLINIYYDALDAPKKG 875

Query: 361  GGKVQVPNDLAVEMFPHYMERDR-LFTSTSILGLIYDEVIRCQTNDDMSAKEIRKLPCFD 537
            G K++VP  L     PH+MER +  + STSILG I+D     Q  +++   E++KLPCF+
Sbjct: 876  GKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQ--EEVPNIEVQKLPCFE 933

Query: 538  VEIPISCMEKWEALYKEYRKDMTTALNDHSNANEKAAEVN-QIYKQKLYGAASMEDSPKS 714
             E+P     KW+ LY+ YRKDM  A+    +A   AAE   + YK+ LYGA  +E SP+S
Sbjct: 934  EELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRS 993

Query: 715  ISGIYNEALAVYHITYDYAIQMNSVEKCGFAWKVAGSALTSLYAINQNPKALTCTPSVLR 894
               +Y EALA+Y +TYD+A+   SV  CGFAWKVAGSAL  LYAI  + ++  C PSV+R
Sbjct: 994  NEEVYQEALAIYQVTYDHAMS-RSVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMR 1052

Query: 895  EIF 903
            EIF
Sbjct: 1053 EIF 1055


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  253 bits (647), Expect = 3e-65
 Identities = 145/304 (47%), Positives = 192/304 (63%), Gaps = 3/304 (0%)
 Frame = +1

Query: 1    DGDMYWVSKNPQLLQYFRKSDPWMESPAPFNSVRLDSSVKNPRALSTXXXXXXXXXXXXX 180
            DGDMY++S+NP+LL++F+ S+PW+    P  S    +S + P  LS              
Sbjct: 688  DGDMYFISRNPELLEHFKPSEPWVSLTPPSKS----NSGRAPSQLSPEELEEELFEMFLK 743

Query: 181  NRFQSSFAIGMAADSWMTHMDRLLTLRNHHTEEKEKQRVQENILKLINIYYEALDAPKKG 360
              F +S  IG+AADSW+T MDRLL L +   EEK + +  + +LKLI+IYY+ALDAPKKG
Sbjct: 744  AGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMK--KKMLKLIDIYYDALDAPKKG 801

Query: 361  GGKVQVPNDLAVEMFPHYMERDRLFTSTSILGLIYDEVIRCQTNDDMSAKEIRKLPCFDV 540
              KV +PN+L  ++FPHYMER++ F STSILGLIYD V    T +   + EI KLPCF+ 
Sbjct: 802  D-KVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFED 860

Query: 541  EIPIS--CMEKWEALYKEYRKDMTTALNDHSNANEKAAEVNQIYKQKLYGAASMEDSPKS 714
            E P+S   MEK    Y  YR +MT A+   ++ +E A EV Q YKQ+ YGAA  EDS KS
Sbjct: 861  E-PVSEFHMEKCRRWYDNYRSEMTQAMK--TDKDESANEVIQRYKQEFYGAAGFEDSKKS 917

Query: 715  ISGIYNEALAVYHITYDYAIQMNSVEKCGFAWKVAGSALTSLYAINQ-NPKALTCTPSVL 891
            +  +Y +AL +Y I YDYAI    V KCGF WKVAG  L   Y + +   K+L C PSVL
Sbjct: 918  LEELYPQALTLYKIVYDYAIHA-GVSKCGFVWKVAGPVLCRFYLMKKMQEKSLVCAPSVL 976

Query: 892  REIF 903
            +E++
Sbjct: 977  KELW 980