BLASTX nr result

ID: Glycyrrhiza23_contig00009909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009909
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635942.1| PHD finger protein [Medicago truncatula] gi|...   186   1e-45
ref|XP_003546630.1| PREDICTED: PHD finger protein rhinoceros-lik...   166   2e-39
ref|XP_003545699.1| PREDICTED: protein Jade-3-like [Glycine max]      166   2e-39
ref|XP_002300454.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
emb|CBI20099.3| unnamed protein product [Vitis vinifera]              154   5e-36

>ref|XP_003635942.1| PHD finger protein [Medicago truncatula]
           gi|355501877|gb|AES83080.1| PHD finger protein [Medicago
           truncatula]
          Length = 322

 Score =  186 bits (473), Expect = 1e-45
 Identities = 82/110 (74%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = -3

Query: 329 DWFCERCRLKRDQNNDVA-VSCSLCPVKEGAMKRTTEKGKWAHMVCALLVPEVFFIDPEG 153
           DWFC++CR K D + D   + CSLCP KEGAMK+TT+ GKW H+VCALLVPEVFF+DPEG
Sbjct: 171 DWFCDQCRFKNDIDTDTGPIRCSLCPTKEGAMKQTTD-GKWVHLVCALLVPEVFFVDPEG 229

Query: 152 REGIDCSKVPKKRWLERCYVCESRDGCALVCSEPKCRLGFHITCGLKEGL 3
           REGIDCSK+PKKRWLE+CYVC   DGCALVCSE KC LGFHITCG+KE L
Sbjct: 230 REGIDCSKIPKKRWLEKCYVCGCFDGCALVCSEQKCGLGFHITCGIKEDL 279


>ref|XP_003546630.1| PREDICTED: PHD finger protein rhinoceros-like [Glycine max]
          Length = 317

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/116 (68%), Positives = 92/116 (79%), Gaps = 7/116 (6%)
 Frame = -3

Query: 329 DWFCERCRLKRDQNNDVAVSCS---LCPVKEGAMKRTT--EKG--KWAHMVCALLVPEVF 171
           DWFCERC  + ++N+   ++C+   LCP  EGAMKRTT  E+G   WAH+VCAL VPEVF
Sbjct: 159 DWFCERCCFRFEKNDVGNINCNACVLCPSTEGAMKRTTAEEEGGATWAHVVCALFVPEVF 218

Query: 170 FIDPEGREGIDCSKVPKKRWLERCYVCESRDGCALVCSEPKCRLGFHITCGLKEGL 3
           F+DPEGREGID SKVPKKRW ERCY+C S +GCALVCSEPKC LGFH+TC LKE L
Sbjct: 219 FLDPEGREGIDFSKVPKKRWEERCYLCGSCEGCALVCSEPKCGLGFHVTCALKEEL 274


>ref|XP_003545699.1| PREDICTED: protein Jade-3-like [Glycine max]
          Length = 317

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/116 (68%), Positives = 92/116 (79%), Gaps = 7/116 (6%)
 Frame = -3

Query: 329 DWFCERCRLKRDQNNDVAVSCS---LCPVKEGAMKRTT--EKG--KWAHMVCALLVPEVF 171
           DWFCERC  + ++N+   ++C+   LCP  EGAMKRTT  E+G   WAH+VCAL VPEVF
Sbjct: 159 DWFCERCCFRFEKNDVGNINCNACVLCPSTEGAMKRTTAEEEGGATWAHVVCALFVPEVF 218

Query: 170 FIDPEGREGIDCSKVPKKRWLERCYVCESRDGCALVCSEPKCRLGFHITCGLKEGL 3
           F+DPEGREGID SKVPKKRW ERCY+C S +GCALVCSEPKC LGFH+TC LKE L
Sbjct: 219 FLDPEGREGIDFSKVPKKRWEERCYLCGSCEGCALVCSEPKCGLGFHVTCALKEEL 274


>ref|XP_002300454.1| predicted protein [Populus trichocarpa] gi|222847712|gb|EEE85259.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  156 bits (394), Expect = 2e-36
 Identities = 69/115 (60%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
 Frame = -3

Query: 329 DWFCERC---RLKRDQNNDVAVSCSLCPVKEGAMKRTTEKG---KWAHMVCALLVPEVFF 168
           DWFC +C   +  R ++   ++SC  CP K GA+K TT KG    WAH+VCALL+PEVFF
Sbjct: 189 DWFCIQCLASKSYRSESKQSSLSCCFCPTKGGALKPTTTKGVDGSWAHVVCALLIPEVFF 248

Query: 167 IDPEGREGIDCSKVPKKRWLERCYVCESRDGCALVCSEPKCRLGFHITCGLKEGL 3
            DP+GREGI+CSKVPK+RW  +CYVC+SR GC + CSEPKC L FH+TCGL E L
Sbjct: 249 DDPDGREGINCSKVPKRRWEGKCYVCKSRTGCVIECSEPKCPLAFHVTCGLNEDL 303


>emb|CBI20099.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  154 bits (390), Expect = 5e-36
 Identities = 70/112 (62%), Positives = 85/112 (75%), Gaps = 3/112 (2%)
 Frame = -3

Query: 329 DWFCERC---RLKRDQNNDVAVSCSLCPVKEGAMKRTTEKGKWAHMVCALLVPEVFFIDP 159
           DWFC +C      +++ N  A SC LCP   GAMK  TE G+WAH+VCALLVPEVFF DP
Sbjct: 19  DWFCNQCLGSHSSQNKKNPKAFSCCLCPNTGGAMK-PTEDGRWAHIVCALLVPEVFFKDP 77

Query: 158 EGREGIDCSKVPKKRWLERCYVCESRDGCALVCSEPKCRLGFHITCGLKEGL 3
           EGR+G+D SKVP +RW E+CYVC+S +GCA+ CSEPKC L FH+TCGL+E L
Sbjct: 78  EGRDGVDRSKVPLRRWKEKCYVCKSSNGCAIDCSEPKCPLAFHVTCGLREEL 129


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