BLASTX nr result

ID: Glycyrrhiza23_contig00009906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009906
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_13516101.1| hypothetical protein HMPREF1043_0707 [Strepto...   108   1e-21
ref|NP_738153.1| hypothetical protein CE1543 [Corynebacterium ef...    84   3e-14
ref|ZP_09103479.1| hypothetical protein DesgiDRAFT_4599 [Desulfo...    79   9e-13
ref|ZP_07803361.1| conserved hypothetical protein [Bifidobacteri...    73   9e-11
ref|ZP_06578098.1| LOW QUALITY PROTEIN: conserved hypothetical p...    64   5e-08

>ref|ZP_13516101.1| hypothetical protein HMPREF1043_0707 [Streptococcus anginosus
           subsp. whileyi CCUG 39159] gi|383341230|gb|EID19495.1|
           hypothetical protein HMPREF1043_0707 [Streptococcus
           anginosus subsp. whileyi CCUG 39159]
          Length = 191

 Score =  108 bits (270), Expect = 1e-21
 Identities = 69/146 (47%), Positives = 83/146 (56%)
 Frame = +3

Query: 3   VFLVNSRFPLDSAPLTATTPHGCTTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVG 182
           +FL+NSRFPL SA    +  H       PL+PKLRGHFAEFL+HDSLDRL ILYL+T VG
Sbjct: 1   MFLINSRFPLVSAAPIPSHQHVVLKVGAPLLPKLRGHFAEFLNHDSLDRLSILYLTTCVG 60

Query: 183 LGYGRTRHLAHEAFLDSTGSLTHPQPWAPHHASTFTPSGFTYQTVHTLSPGQPSPGMSYL 362
           LGYG+    A +AFL S GS  HP P         T  GFTY+  +TL PG       + 
Sbjct: 61  LGYGQFEPHA-DAFLGSIGSPDHP-PCGRPSGLRHTAGGFTYRQPYTLRPGH-----FHC 113

Query: 363 TASLRSLPTT*SVHTLTHPRSIKNTP 440
            A L S  T   V+ L  P  +  +P
Sbjct: 114 PARLPSCVT--PVNALASPVQVPRSP 137


>ref|NP_738153.1| hypothetical protein CE1543 [Corynebacterium efficiens YS-314]
           gi|23493383|dbj|BAC18353.1| conserved hypothetical
           protein [Corynebacterium efficiens YS-314]
          Length = 261

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 52/116 (44%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
 Frame = +3

Query: 3   VFLVNSRFPLDSAPLTATTPHGC-----TTAQVPLIPKLRGHFAEFLHHDSLDRLGILYL 167
           VF     F   S P     PH       +  Q PL+PKLRGHFAEFL+H S +RL ILYL
Sbjct: 68  VFARTCVFSKQSLPSILCDPHQLQKQIPSPVQAPLLPKLRGHFAEFLNHSSPERLSILYL 127

Query: 168 STSVGLGYGRTRHLAHEAFLDSTGSLTHPQPW-APHHASTFTPSGFTYQTVHTLSP 332
           +T VGLGYG   H+A          +T   P  A HHAS     GFT  + HTL+P
Sbjct: 128 TTCVGLGYGPNMHIARG--FSRQYRITEFTPLRATHHASNIMRYGFTNTSFHTLTP 181



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 69/191 (36%), Positives = 80/191 (41%), Gaps = 8/191 (4%)
 Frame = +2

Query: 2   CVFGKQSFPPGLCAPHRHHTARVHDSSGPPYPKVTGAFCRVPSPRFTRSPRYTLPIHQCR 181
           CVF KQS P  LC PH+           P  PK+ G F          S    L I    
Sbjct: 73  CVFSKQSLPSILCDPHQLQKQIPSPVQAPLLPKLRGHFAEF----LNHSSPERLSILYLT 128

Query: 182 FRVRADPPPR---SRSFSRQYRITHSPTTVGSPSCLNLHAQRI----YLPDSPHT*PRTT 340
             V     P    +R FSRQYRIT       +P     HA  I    +   S HT    +
Sbjct: 129 TCVGLGYGPNMHIARGFSRQYRITEF-----TPLRATHHASNIMRYGFTNTSFHTLTPQS 183

Query: 341 ITGDELPHCVPPQLAYYMIGSHTHPPQKHQKHSQDKLTCLASHTSTRTV-TSRYQNINWL 517
                LPHCV P L+YY I SH      HQ   +  +  + S T +    T  Y NIN L
Sbjct: 184 TKWLMLPHCVTPSLSYYQIRSHAR--HHHQPEGRHVILWVVSITDSPWARTLGYGNINPL 241

Query: 518 PIDYACRPRLR 550
            IDYACRPRLR
Sbjct: 242 SIDYACRPRLR 252


>ref|ZP_09103479.1| hypothetical protein DesgiDRAFT_4599 [Desulfotomaculum gibsoniae
           DSM 7213] gi|355354950|gb|EHG02832.1| hypothetical
           protein DesgiDRAFT_4599 [Desulfotomaculum gibsoniae DSM
           7213]
          Length = 100

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   VFLVNSRFPLDSAPLTATTPHGCTTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVG 182
           +FLVNSR  L SA  + +      T++VPL+PKLRGHFAEFL+   L RL IL   T VG
Sbjct: 1   MFLVNSRLGLFSATSSCSDSECLHTSEVPLLPKLRGHFAEFLNEGFLARLRILTPPTCVG 60

Query: 183 LGYGRTRHL--AHEAFLDSTGSLTHPQPWAPHHASTFTPSGF 302
           L YG   HL  + E FLDS G+ T    +AP + S F  +GF
Sbjct: 61  LRYG---HLIASLEVFLDSLGAATSLLVFAPRYLSGFVQAGF 99


>ref|ZP_07803361.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171] gi|313133678|gb|EFR51295.1| conserved
           hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 61

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 39/65 (60%), Positives = 45/65 (69%)
 Frame = +3

Query: 9   LVNSRFPLDSAPLTATTPHGCTTAQVPLIPKLRGHFAEFLHHDSLDRLGILYLSTSVGLG 188
           +VNSR+PL  A    ++P G     V L+PK R  FAEFL  DSLDR GILYL+TSVGLG
Sbjct: 1   MVNSRYPLACATPRRSSPQG-----VSLMPKAREQFAEFLDQDSLDRFGILYLTTSVGLG 55

Query: 189 YGRTR 203
           YGR R
Sbjct: 56  YGRQR 60


>ref|ZP_06578098.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
           ghanaensis ATCC 14672] gi|291341603|gb|EFE68559.1| LOW
           QUALITY PROTEIN: conserved hypothetical protein
           [Streptomyces ghanaensis ATCC 14672]
          Length = 91

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 40/83 (48%), Positives = 45/83 (54%)
 Frame = +3

Query: 177 VGLGYGRTRHLAHEAFLDSTGSLTHPQPWAPHHASTFTPSGFTYQTVHTLSPGQPSPGMS 356
           VG GYG   + + EAFLDS GS T PQ  A H  S   P GF Y T +TL+PGQP PG+ 
Sbjct: 1   VGFGYGPPCN-SLEAFLDSIGSSTSPQS-ARHRVSDDVPGGFAYLTSYTLTPGQPPPGLD 58

Query: 357 YLTASLRSLPTT*SVHTLTHPRS 425
            L AS    PT      L H  S
Sbjct: 59  CLPASPHHSPTNRLGRRLHHSPS 81


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