BLASTX nr result

ID: Glycyrrhiza23_contig00009872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009872
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605778.1| hypothetical protein MTR_4g039540 [Medicago ...   155   1e-35
gb|AFK47750.1| unknown [Lotus japonicus]                              138   1e-30
ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm...    90   5e-16
ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2...    79   9e-13
ref|XP_003558490.1| PREDICTED: uncharacterized protein LOC100831...    77   4e-12

>ref|XP_003605778.1| hypothetical protein MTR_4g039540 [Medicago truncatula]
           gi|217075110|gb|ACJ85915.1| unknown [Medicago
           truncatula] gi|355506833|gb|AES87975.1| hypothetical
           protein MTR_4g039540 [Medicago truncatula]
           gi|388514575|gb|AFK45349.1| unknown [Medicago
           truncatula]
          Length = 118

 Score =  155 bits (391), Expect = 1e-35
 Identities = 82/118 (69%), Positives = 90/118 (76%), Gaps = 4/118 (3%)
 Frame = +2

Query: 185 IGHYWSSKRTPFVPLSCHHQGRRVPPLISNSNPQEKKDMGGG---KLALLKWKMLMNGFE 355
           I H W   RTP VPLSC  QGRR  P ISNSN +EKKDMGG    +  LLK K+++N FE
Sbjct: 5   ITHSWYRIRTPLVPLSC--QGRR--PTISNSNHEEKKDMGGRGAKRSPLLKLKVILNDFE 60

Query: 356 KLIGKRPDDDDENLSPQQKGDWKDLLLMSISFAVYVYISQKLVCAYCVWTSMPK-QVW 526
           KLIGK+P  + +NLSPQQKGDWKDL LMSISFAVYVYISQKLVCAYC WTSMP   VW
Sbjct: 61  KLIGKKPQQEMKNLSPQQKGDWKDLFLMSISFAVYVYISQKLVCAYCAWTSMPNVHVW 118


>gb|AFK47750.1| unknown [Lotus japonicus]
          Length = 123

 Score =  138 bits (348), Expect = 1e-30
 Identities = 83/136 (61%), Positives = 95/136 (69%), Gaps = 14/136 (10%)
 Frame = +2

Query: 161 MAALSSTVIGHYWSSKRTP-------------FVPLSCHHQGRRVPPLISNSNPQEKKDM 301
           MAAL+   +GH    KRT              F+ ++C  QG R   L SNSNP EKKDM
Sbjct: 1   MAALT---VGHCCCGKRTSSHHEFTNRTSPRIFILVAC--QGGR---LASNSNPDEKKDM 52

Query: 302 GGGKLA-LLKWKMLMNGFEKLIGKRPDDDDENLSPQQKGDWKDLLLMSISFAVYVYISQK 478
            GGKL  LLKWK+L NGFEKL GKRP+   +NLSP+QKGDWKDL LMSISFA+YVYISQK
Sbjct: 53  RGGKLINLLKWKVL-NGFEKL-GKRPE---QNLSPKQKGDWKDLFLMSISFALYVYISQK 107

Query: 479 LVCAYCVWTSMPKQVW 526
           LVCAYC WTS+PK +W
Sbjct: 108 LVCAYCAWTSLPKHLW 123


>ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis]
           gi|223543079|gb|EEF44614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
 Frame = +2

Query: 161 MAALSSTVIGHYWSSKRTPFVPLSCHHQGRRVPPL-------ISNSNPQEKKDMGGGKLA 319
           MAALS   + H+  +K +    L      R +  L       I +S+P+ K++M   K  
Sbjct: 1   MAALS---LSHFLHNKNSSVQLLKTRSNPRIIVHLSCQRDEPIDSSSPKVKEEMKQEKQV 57

Query: 320 LLKWKMLMNGFEKLIGKRPDDDDENLSPQQKGDWKDLLLMSISFAVYVYISQKLVCAYCV 499
           +++   L    EK      D    NLSP+QKGDWKD++LMS+SFAVYVYISQ++VCAYC 
Sbjct: 58  MVR--QLFVSAEKFAKGVKD----NLSPKQKGDWKDVVLMSLSFAVYVYISQQIVCAYCA 111

Query: 500 WTSMPKQVW 526
           WTSM KQ W
Sbjct: 112 WTSMLKQPW 120


>ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 33/44 (75%), Positives = 41/44 (93%)
 Frame = +2

Query: 389 ENLSPQQKGDWKDLLLMSISFAVYVYISQKLVCAYCVWTSMPKQ 520
           +NLSP++KGDWKD++LMS+SFAVYVY+SQK+VCAYC W SM KQ
Sbjct: 74  DNLSPKRKGDWKDVMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQ 117


>ref|XP_003558490.1| PREDICTED: uncharacterized protein LOC100831987 [Brachypodium
           distachyon]
          Length = 126

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 389 ENLSPQQKGDWKDLLLMSISFAVYVYISQKLVCAYCVWTSM 511
           ENLSP+QKGDWKD+ LMS+SFAVYVYISQ++VC YC W SM
Sbjct: 83  ENLSPKQKGDWKDVALMSLSFAVYVYISQRIVCTYCAWVSM 123


Top