BLASTX nr result

ID: Glycyrrhiza23_contig00009864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009864
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238307.1| uncharacterized protein LOC100306659 [Glycin...   236   4e-60
ref|XP_003529703.1| PREDICTED: transcription elongation factor S...   234   3e-59
ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   229   5e-58
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   227   2e-57
gb|AFK41664.1| unknown [Lotus japonicus]                              226   5e-57

>ref|NP_001238307.1| uncharacterized protein LOC100306659 [Glycine max]
           gi|255629207|gb|ACU14948.1| unknown [Glycine max]
          Length = 116

 Score =  236 bits (603), Expect = 4e-60
 Identities = 110/115 (95%), Positives = 113/115 (98%)
 Frame = -3

Query: 611 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMEEDHERVVDCTTPNFN 432
           MA+APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMEEDHERVVDCTTPNFN
Sbjct: 1   MATAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHERVVDCTTPNFN 60

Query: 431 GIISVMDPTRSWAARWLRIGKYVPGVYTLAVSEALPEEMQAICEDERVQYMPPKR 267
           GIISVMDP RSWAARWLRIGK+VPGVYTLAVSEALPEEMQAICEDERVQY+PPKR
Sbjct: 61  GIISVMDPNRSWAARWLRIGKFVPGVYTLAVSEALPEEMQAICEDERVQYIPPKR 115


>ref|XP_003529703.1| PREDICTED: transcription elongation factor SPT4 homolog 1-like
           [Glycine max]
          Length = 116

 Score =  234 bits (596), Expect = 3e-59
 Identities = 109/115 (94%), Positives = 112/115 (97%)
 Frame = -3

Query: 611 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMEEDHERVVDCTTPNFN 432
           MA+APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMEEDHE VVDCTTPNFN
Sbjct: 1   MATAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHELVVDCTTPNFN 60

Query: 431 GIISVMDPTRSWAARWLRIGKYVPGVYTLAVSEALPEEMQAICEDERVQYMPPKR 267
           GIISVMDP RSWAARWLRIGK+VPGVYTLAVSEALPEEMQAICEDERVQY+PPKR
Sbjct: 61  GIISVMDPNRSWAARWLRIGKFVPGVYTLAVSEALPEEMQAICEDERVQYIPPKR 115


>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  229 bits (585), Expect = 5e-58
 Identities = 104/115 (90%), Positives = 111/115 (96%)
 Frame = -3

Query: 611 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMEEDHERVVDCTTPNFN 432
           M S PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKM+EDHERVVDCTTPNFN
Sbjct: 1   MGSVPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60

Query: 431 GIISVMDPTRSWAARWLRIGKYVPGVYTLAVSEALPEEMQAICEDERVQYMPPKR 267
           GIISVMDPTRSWAARWLRIG++VPG YTLAVSEALPE++QA+CE+ERVQY PPKR
Sbjct: 61  GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPKR 115


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  227 bits (579), Expect = 2e-57
 Identities = 103/115 (89%), Positives = 111/115 (96%)
 Frame = -3

Query: 611 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMEEDHERVVDCTTPNFN 432
           MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKM+EDHERVV+CTTPNFN
Sbjct: 1   MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN 60

Query: 431 GIISVMDPTRSWAARWLRIGKYVPGVYTLAVSEALPEEMQAICEDERVQYMPPKR 267
           GIISVMDP RSWAARWLRIG++VPG YTLAVSEALPE++Q +CE+ERVQY PPKR
Sbjct: 61  GIISVMDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPKR 115


>gb|AFK41664.1| unknown [Lotus japonicus]
          Length = 115

 Score =  226 bits (576), Expect = 5e-57
 Identities = 103/115 (89%), Positives = 109/115 (94%)
 Frame = -3

Query: 611 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMEEDHERVVDCTTPNFN 432
           M+  PAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENC FFKMEEDHER+ DCTTPNFN
Sbjct: 1   MSREPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCQFFKMEEDHERIADCTTPNFN 60

Query: 431 GIISVMDPTRSWAARWLRIGKYVPGVYTLAVSEALPEEMQAICEDERVQYMPPKR 267
           GIISVMDP+RSWAARWLRIGK+ PGVYTLAVSEALPEEMQAICE+ERVQY PPKR
Sbjct: 61  GIISVMDPSRSWAARWLRIGKFAPGVYTLAVSEALPEEMQAICEEERVQYAPPKR 115


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