BLASTX nr result

ID: Glycyrrhiza23_contig00009847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009847
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containi...   337   4e-90
ref|XP_003597701.1| Pentatricopeptide repeat-containing protein ...   336   6e-90
ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...   333   4e-89
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   298   2e-78
emb|CBI20026.3| unnamed protein product [Vitis vinifera]              295   2e-77

>ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 559

 Score =  337 bits (863), Expect = 4e-90
 Identities = 157/183 (85%), Positives = 169/183 (92%)
 Frame = +3

Query: 3   PFDAVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPNN 182
           PFDAVVDGANVGLAN H FSFSQLN+VV+QLRQ+SPSKRLPLIILH++RV GGPAQ+P N
Sbjct: 366 PFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHISRVRGGPAQNPKN 425

Query: 183 RRLIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK 362
            RLIENWK NGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGS+FFPRWK
Sbjct: 426 MRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWK 485

Query: 363 EKHQVRVSASKRGASLVLPPRYSIVIQESANGSWHVPTVSSDDHEIPRKWLCVTRSRKK* 542
           EKHQVR SAS  G S+++PPRYSIVIQESANGSWHVPTV++DDHEIPRKWLC TRSRK  
Sbjct: 486 EKHQVRTSASTCGHSIIMPPRYSIVIQESANGSWHVPTVTTDDHEIPRKWLCATRSRKDS 545

Query: 543 FHN 551
            HN
Sbjct: 546 LHN 548


>ref|XP_003597701.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355486749|gb|AES67952.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 558

 Score =  336 bits (861), Expect = 6e-90
 Identities = 159/179 (88%), Positives = 169/179 (94%)
 Frame = +3

Query: 3   PFDAVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPNN 182
           PFDAVVDGANVGLAN+ +FSF QL+ VV+QLRQ+SPSKRLPLIILHVNRVTGGPAQ+PNN
Sbjct: 377 PFDAVVDGANVGLANIAEFSFKQLDYVVRQLRQLSPSKRLPLIILHVNRVTGGPAQNPNN 436

Query: 183 RRLIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK 362
           +RLIENWK NG LYATP GSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK
Sbjct: 437 KRLIENWKKNGVLYATPHGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK 496

Query: 363 EKHQVRVSASKRGASLVLPPRYSIVIQESANGSWHVPTVSSDDHEIPRKWLCVTRSRKK 539
           EKHQVRVS S RGASLVLPPRYS+VIQESANGSWHVPTV SD+ +IPRKWLCVTRSRKK
Sbjct: 497 EKHQVRVSVSTRGASLVLPPRYSLVIQESANGSWHVPTVVSDEPDIPRKWLCVTRSRKK 555


>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  333 bits (854), Expect = 4e-89
 Identities = 155/183 (84%), Positives = 168/183 (91%)
 Frame = +3

Query: 3   PFDAVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPNN 182
           PFDAVVDGANVGLAN H FSFSQLN+VV+QLRQ+SPSKRLPLIILH++RV GGPAQ+P N
Sbjct: 367 PFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHISRVHGGPAQNPKN 426

Query: 183 RRLIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK 362
           +RLIENWK NG LYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGS+FFPRWK
Sbjct: 427 KRLIENWKKNGVLYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWK 486

Query: 363 EKHQVRVSASKRGASLVLPPRYSIVIQESANGSWHVPTVSSDDHEIPRKWLCVTRSRKK* 542
           EKHQVR SAS  G SL++PPRYSIVIQESA+G WHVPTV++DDHEIPRKWLC TRSRK  
Sbjct: 487 EKHQVRTSASTCGRSLIMPPRYSIVIQESASGCWHVPTVTTDDHEIPRKWLCATRSRKDS 546

Query: 543 FHN 551
            HN
Sbjct: 547 LHN 549


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  298 bits (762), Expect = 2e-78
 Identities = 137/179 (76%), Positives = 156/179 (87%)
 Frame = +3

Query: 3   PFDAVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPNN 182
           PFDAV+DGAN+GL N   FSF QLN+VV +LRQMSPSKRLPLIILH +RVTGGPAQ+PNN
Sbjct: 408 PFDAVIDGANLGLINQTNFSFRQLNTVVSKLRQMSPSKRLPLIILHRSRVTGGPAQNPNN 467

Query: 183 RRLIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK 362
            +L+E WK +GALYATP GSNDDWYWLYAAVSC CLL+TNDEMRDHLFQLLG+SFFPRWK
Sbjct: 468 MKLLEFWKKSGALYATPTGSNDDWYWLYAAVSCNCLLVTNDEMRDHLFQLLGTSFFPRWK 527

Query: 363 EKHQVRVSASKRGASLVLPPRYSIVIQESANGSWHVPTVSSDDHEIPRKWLCVTRSRKK 539
           EKHQVR+S S+ G +L +PP YSIVIQES NGSWHVPT+S DD E PR+WLC +R+R K
Sbjct: 528 EKHQVRLSVSRSGIALHMPPPYSIVIQESENGSWHVPTISEDDLETPRQWLCASRTRNK 586


>emb|CBI20026.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  295 bits (754), Expect = 2e-77
 Identities = 136/182 (74%), Positives = 157/182 (86%)
 Frame = +3

Query: 3   PFDAVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPNN 182
           PFDAVVDGANV L N   FSF +LNSVV +LRQ+SPSKRLPL+ILH +RVTGGPAQ+PNN
Sbjct: 153 PFDAVVDGANVSLINQKSFSFFELNSVVNRLRQISPSKRLPLVILHRSRVTGGPAQNPNN 212

Query: 183 RRLIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWK 362
           ++LIE+WK +GALYATP GSNDDWYWLYAAV+C CLL+TNDEMRDHLFQLLG+SFFPRWK
Sbjct: 213 KKLIESWKKSGALYATPAGSNDDWYWLYAAVNCNCLLVTNDEMRDHLFQLLGTSFFPRWK 272

Query: 363 EKHQVRVSASKRGASLVLPPRYSIVIQESANGSWHVPTVSSDDHEIPRKWLCVTRSRKK* 542
           EKHQVR++ ++RG  L +PP YSIVIQES  GSWHVPTV+ DD E PR+WLC TR+RK  
Sbjct: 273 EKHQVRLTITRRGPVLHMPPPYSIVIQESEQGSWHVPTVTGDDLETPRQWLCATRTRKNH 332

Query: 543 FH 548
            H
Sbjct: 333 RH 334


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