BLASTX nr result
ID: Glycyrrhiza23_contig00009826
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00009826
(1420 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 96 5e-30
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 96 6e-30
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 95 1e-29
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ... 105 3e-28
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta... 96 1e-26
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 96.3 bits (238), Expect(2) = 5e-30
Identities = 69/234 (29%), Positives = 110/234 (47%)
Frame = -2
Query: 1059 GFKWCLIFAVAILFIWLARNDWVFNGKRPSGVGVGKKVLCQVAAILACYDDSKKASLPIQ 880
G W LIF + +W ARN VF+ + + + + + +K+ L
Sbjct: 1668 GTNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLL--AKRTGLQTA 1725
Query: 879 LDTNRSNIRWVAPYYDFVKFNVDGAATSHGNSGAAGGVLRNDRGGFILGFASHLGSGTTT 700
T + W P F K N DGA SH + +AGG+LRN+ G ++ G+ ++G+ +
Sbjct: 1726 FQTW---VVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSF 1782
Query: 699 EAKLEAIFIGISLSIIHGLKKVILESDSLVAVKLIGEGCHDQHPYFNLLREIRSLLLVEE 520
A+L + G+ L+ G K+I E+DS V+++ + L+++ + LL +
Sbjct: 1783 LAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQ 1842
Query: 519 EFYVTHTLREGNQVADSFAKFRLSLNNCSTVFRIVPAFASLSLQADMAGTCFSR 358
E VTH LREGNQ AD A S + +T+ P + LQ D G SR
Sbjct: 1843 EIKVTHILREGNQCADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLASSR 1896
Score = 62.8 bits (151), Expect(2) = 5e-30
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 1324 EKYKLHLWKVSQNALVTNVLRFRRGLAASGDCPICGRGVESVLHLFKDCQLAS*TW 1157
EK KL +WK+ +N L+ NV R RRGLA + CP+CG E++ HLF+ C LA W
Sbjct: 1579 EKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACW 1634
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 95.9 bits (237), Expect(2) = 6e-30
Identities = 69/234 (29%), Positives = 110/234 (47%)
Frame = -2
Query: 1059 GFKWCLIFAVAILFIWLARNDWVFNGKRPSGVGVGKKVLCQVAAILACYDDSKKASLPIQ 880
G W LIF + +W ARN VF+ + + + + + +K+ L
Sbjct: 1136 GTNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLL--AKRTGLQTA 1193
Query: 879 LDTNRSNIRWVAPYYDFVKFNVDGAATSHGNSGAAGGVLRNDRGGFILGFASHLGSGTTT 700
T + W P F K N DGA SH + +AGG+LRN+ G ++ G+ ++G+ +
Sbjct: 1194 FQTW---VVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSF 1250
Query: 699 EAKLEAIFIGISLSIIHGLKKVILESDSLVAVKLIGEGCHDQHPYFNLLREIRSLLLVEE 520
A+L + G+ L+ G K+I E+DS V+++ + L+++ + LL +
Sbjct: 1251 LAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQ 1310
Query: 519 EFYVTHTLREGNQVADSFAKFRLSLNNCSTVFRIVPAFASLSLQADMAGTCFSR 358
E VTH LREGNQ AD A S + +T+ P + LQ D G SR
Sbjct: 1311 EIKVTHILREGNQCADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLASSR 1364
Score = 62.8 bits (151), Expect(2) = 6e-30
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 1324 EKYKLHLWKVSQNALVTNVLRFRRGLAASGDCPICGRGVESVLHLFKDCQLAS*TW 1157
EK KL +WK+ +N L+ NV R RRGLA + CP+CG E++ HLF+ C LA W
Sbjct: 1047 EKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACW 1102
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 94.7 bits (234), Expect(2) = 1e-29
Identities = 68/231 (29%), Positives = 109/231 (47%)
Frame = -2
Query: 1050 WCLIFAVAILFIWLARNDWVFNGKRPSGVGVGKKVLCQVAAILACYDDSKKASLPIQLDT 871
W LIF + +W ARN VF+ + + + + + +K+ L T
Sbjct: 1139 WSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLL--AKRTGLQTAFQT 1196
Query: 870 NRSNIRWVAPYYDFVKFNVDGAATSHGNSGAAGGVLRNDRGGFILGFASHLGSGTTTEAK 691
+ W P F K N DGA SH + +AGG+LRN+ G ++ G+ ++G+ + A+
Sbjct: 1197 W---VVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAE 1253
Query: 690 LEAIFIGISLSIIHGLKKVILESDSLVAVKLIGEGCHDQHPYFNLLREIRSLLLVEEEFY 511
L + G+ L+ G K+I E+DS V+++ + L+++ + LL +E
Sbjct: 1254 LWGLREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIK 1313
Query: 510 VTHTLREGNQVADSFAKFRLSLNNCSTVFRIVPAFASLSLQADMAGTCFSR 358
VTH LREGNQ AD A S + +T+ P + LQ D G SR
Sbjct: 1314 VTHILREGNQCADFLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLASSR 1364
Score = 62.8 bits (151), Expect(2) = 1e-29
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 1324 EKYKLHLWKVSQNALVTNVLRFRRGLAASGDCPICGRGVESVLHLFKDCQLAS*TW 1157
EK KL +WK+ +N L+ NV R RRGLA + CP+CG E++ HLF+ C LA W
Sbjct: 1047 EKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACW 1102
>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 105 bits (262), Expect(2) = 3e-28
Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 5/252 (1%)
Frame = -2
Query: 1098 WLTGNLKAETLIRGFKWCLIFAVAILFIWLARNDWVF--NGKRPSGVGVGKKVLCQV-AA 928
W+ GNLK + W +FA+ + + W R +VF + + V K + +V AA
Sbjct: 429 WMYGNLKERSDSERRSWPTLFALTVWWGWKWRCGYVFGEDSRCRDRVKFLKSAVAEVEAA 488
Query: 927 ILACYDDSKKASLPIQLDTNRSNIRWVAPYYDFVKFNVDGAATSHGNSG--AAGGVLRND 754
LA D+++ L ++ I W P +V N DGA SHGN G AGGV+R++
Sbjct: 489 HLAANGDAREDVLVERM------IAWRKPAEGWVTMNTDGA--SHGNPGQATAGGVIRDE 540
Query: 753 RGGFILGFASHLGSGTTTEAKLEAIFIGISLSIIHGLKKVILESDSLVAVKLIGEGCHDQ 574
G +++GFA ++G + A+L ++ G+ ++ G ++V LE DS + V + G D
Sbjct: 541 HGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDS 600
Query: 573 HPYFNLLREIRSLLLVEEEFYVTHTLREGNQVADSFAKFRLSLNNCSTVFRIVPAFASLS 394
HP L+R + + +TH RE N++AD A + +L + P S
Sbjct: 601 HPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLANYAFTLPFGFLLLDSCPEHVSSI 660
Query: 393 LQADMAGTCFSR 358
L D+ GT F R
Sbjct: 661 LLEDVMGTSFPR 672
Score = 47.8 bits (112), Expect(2) = 3e-28
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -1
Query: 1324 EKYKLHLWKVSQNALVTNVLRFRRGLAASGDCPICGRGVESVLHLFKDCQLAS*TW 1157
E+ ++ LW V ++TN R RR +A S CP+C ES++H+ +DC W
Sbjct: 354 ERARIFLWLVGNQVVLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAMMGIW 409
>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 95.5 bits (236), Expect(2) = 1e-26
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 2/249 (0%)
Frame = -2
Query: 1098 WLTGNLKAETLIRGFKWCLIFAVAILFIWLARNDWVF--NGKRPSGVGVGKKVLCQVAAI 925
W+ NL+ RG W +F +A+ + W R +F NGK V K + +VA
Sbjct: 79 WIYKNLRE----RG-SWPTVFVMAVWWGWKWRCGNIFGGNGKCRDRVKFIKDLAEEVAIA 133
Query: 924 LACYDDSKKASLPIQLDTNRSNIRWVAPYYDFVKFNVDGAATSHGNSGAAGGVLRNDRGG 745
A ++ +++ + WV+P +VK N DGA+ + AGGVLR+ G
Sbjct: 134 NAFVKGNE-----VRVSRVERLVSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGA 188
Query: 744 FILGFASHLGSGTTTEAKLEAIFIGISLSIIHGLKKVILESDSLVAVKLIGEGCHDQHPY 565
+I GFA ++G + A+L ++ G+ ++ G ++V LE DS + V + G D HP
Sbjct: 189 WIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPL 248
Query: 564 FNLLREIRSLLLVEEEFYVTHTLREGNQVADSFAKFRLSLNNCSTVFRIVPAFASLSLQA 385
LLR L ++H RE N++AD A + SL+ + P S L
Sbjct: 249 SFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSLGLHLLESRPDVVSSILLD 308
Query: 384 DMAGTCFSR 358
D+AG + R
Sbjct: 309 DVAGVSYPR 317
Score = 52.4 bits (124), Expect(2) = 1e-26
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -1
Query: 1324 EKYKLHLWKVSQNALVTNVLRFRRGLAASGDCPICGRGVESVLHLFKDCQLAS*TW 1157
E+ ++ LW V Q ++TNV R+RR L+ + C IC G E++LH+ +DC + W
Sbjct: 4 ERVRVFLWLVVQQVIITNVERYRRHLSDTRVCQICQGGEETILHVLRDCPAMAGIW 59