BLASTX nr result
ID: Glycyrrhiza23_contig00009794
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00009794
(2180 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 310 1e-81
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 283 1e-73
ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING... 248 6e-63
ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|1956... 193 1e-46
ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828... 181 5e-43
>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
gi|297734114|emb|CBI15361.3| unnamed protein product
[Vitis vinifera]
Length = 648
Score = 310 bits (794), Expect = 1e-81
Identities = 215/624 (34%), Positives = 297/624 (47%), Gaps = 54/624 (8%)
Frame = +2
Query: 185 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPKHGVFSSSRD 364
IC E +I G +D C+HYFCFVCIMEWAK ESRCP+C++RFS + RPPK GVF S R
Sbjct: 55 ICLLEDDRAIRGWVDSCDHYFCFVCIMEWAKVESRCPMCKRRFSTIRRPPKPGVFPSERI 114
Query: 365 VKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXXXXXXTASHTYCVGLGY 544
V VP+RDQ YH +GN+T+GP YAEV C IC DE+ +A+HTYCVGLG+
Sbjct: 115 VNVPVRDQAYHHFGNVTTGPSDPYAEVDCGICHGTADESFLLICDLCDSAAHTYCVGLGH 174
Query: 545 TVPEGDWFCHDCAISR------ETNAIANEESDQQNVV--PTAEPGATILSIVRGTSSQV 700
TVPEGDWFCHDC +SR E +A+ ++ ++ +N P+AE +I IV ++
Sbjct: 175 TVPEGDWFCHDCTVSRAEHANGEIDAVFDDRNNFRNFYRKPSAETHVSICDIVAEPYTRE 234
Query: 701 VRRP----------RASPLRQNHSSSSVNPSLDTVSRFKGKNHVSGVQRAQRNVQVLREN 850
RP +SP+ N + +VN S S + + ++Q LREN
Sbjct: 235 DERPPSIGSSHPNRPSSPIALNSENFAVNNS----SSMSVARTLLRCRNVNAHIQALREN 290
Query: 851 WTALRSGSLKFHCNXXXXXXXXXXXXXXXXLPCGKLDVSHSRASTGLQQSTVLGGHSSNM 1030
W ALRSGS+ F L S +S Q +G
Sbjct: 291 WNALRSGSMTF---------------------SSILGDSGGESS----QKYNVGASCPKQ 325
Query: 1031 SNDKGLKDVDKAWKMMDRAKMMQRT-------HRTGKIPQGVDDPSSSGATEISFAHCNN 1189
N+ D +KAWKMMD+AK +QR H+ K P G + A S + NN
Sbjct: 326 DNNACSYDTEKAWKMMDKAKSIQRACERTGIIHQVSKHPLGKVNVPKEVANVKSSSATNN 385
Query: 1190 PELKNQQPRTLDLRYTRMEKQCDYSSLNKSLENHRSPMLGQKRQSRFTCEMVQHLRDH-- 1363
+L N+ + SL + ++ + Q R T + +
Sbjct: 386 RQLGNKD----------FGWHFKHHSLETDNKRYKPQKSENQEQGRVTRTGIPKFTESSL 435
Query: 1364 TSHSEGYSGHPLPRKIHS--HGAPCHEDGER----------NVVKEQRRSACLVTSVGSD 1507
T HS P RK + H G R N + E+ L+ G
Sbjct: 436 TIHSLVSFDSPSSRKAETSFQVDVHHRTGVRPSQKNLVDSFNAINERDGYGSLIIPDGPV 495
Query: 1508 P-------SRDKLGSVFSNKDVDIFNEEKRLAKRFGNAITKNTEDSKTEIRSLVKLNLKC 1666
P + K G+ K+ + + R+ + +D+K+EI+SLVKLNLK
Sbjct: 496 PRSPDLSHANLKFGASSLCKEDLLHRPKGRVEIGSAKNKARRDDDAKSEIQSLVKLNLKL 555
Query: 1667 LTRDKQLGADTFKLVARQATHTILAACTSKQQ--------SSICSHTDHILQFHKSNLMP 1822
+++DKQLG DTFK VAR ATHTILAAC + +S+C+H++ + Q HKS LMP
Sbjct: 556 ISKDKQLGVDTFKEVARLATHTILAACGLEHSKSCVRSFPTSMCTHSEQVQQLHKSTLMP 615
Query: 1823 DCCRQCXXXXXXXXXXSILLEKVG 1894
CR+C I +EK+G
Sbjct: 616 RSCRECFYAYVKDVVNFITVEKMG 639
>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
splicing factor, arginine/serine-rich 2,rnap interacting
protein, putative [Ricinus communis]
Length = 632
Score = 283 bits (725), Expect = 1e-73
Identities = 206/591 (34%), Positives = 288/591 (48%), Gaps = 62/591 (10%)
Frame = +2
Query: 185 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPKHGVFSSSRD 364
IC +E ++ G+ID C+HYFCF+CIMEWAK ESRCP+C++RF+N+ RPPK GVF S R
Sbjct: 50 ICLSENWSAMRGQIDSCDHYFCFICIMEWAKIESRCPMCKRRFNNIHRPPKDGVFPSERL 109
Query: 365 VKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXXXXXXTASHTYCVGLGY 544
V VP RDQVYH +GN T P YA+V+CSIC DE+ +A+HTYCVGLG+
Sbjct: 110 VNVPKRDQVYHLFGNTTVEPFDPYAQVQCSICHTAEDESLLLLCDLCDSAAHTYCVGLGF 169
Query: 545 TVPEGDWFCHDCAISRETNAIANEESDQQNVVPT----------AEPGATILSIVRGTS- 691
TVPE DWFCHDCA+SR + N + D+ N+ T AEP + S + TS
Sbjct: 170 TVPECDWFCHDCAVSRTEH--ENFQKDEDNITQTLSVKSEVVLAAEPYVAVNS--QNTSE 225
Query: 692 ----------------SQVVRRPRA--------SPLRQNHSSSSVNPSLDTVSRFKGKNH 799
+Q + RPRA S N + P T G+
Sbjct: 226 NYNAGAENGANFCQSDNQSIGRPRARSSQVPSPSERLSNLADDMSQPRETTTRTGPGQET 285
Query: 800 VSGVQRAQRN-------VQVLRENWTALRSGSLKFHCNXXXXXXXXXXXXXXXXLPCGKL 958
R R V+ LRENW ALRSGSL+F + +
Sbjct: 286 PQSDARTLRRCRDVHSYVRALRENWDALRSGSLRFSSSSVESCSRSIAKCYTPVVTHESS 345
Query: 959 DVSHSRASTGLQQSTVLGGHSSNMSNDKGLKDVDKAWKMMDRAKMMQRTHRTGKIPQGVD 1138
SH+ +ST QQ T+ G + D+ D KAWKMM +AK I QG
Sbjct: 346 GQSHTMSSTSGQQLTINDGLPGTFAQDRHSHDAKKAWKMMAKAK---------SIHQGSK 396
Query: 1139 DPSSSG--ATEISFAHCNNPELKNQQPRTLDLRYTRMEKQCDYSSLNKSLENH-RSPMLG 1309
+PS+ G + + + + C+ L++Q + + +T +EKQ S + E H S +
Sbjct: 397 NPSTKGNASRKATGSSCSLHMLRSQFGTSGMVNFT-VEKQHKRYSPERQTEKHVFSKLKM 455
Query: 1310 QKRQSRFTCEMVQHLRDHTSHSEGYSGHPLPRKIHS------HGAPCHEDGERNV----V 1459
Q F+ E+V+ D+ + G+S K+ + + P + R
Sbjct: 456 QNHGINFSKEIVRP-GDNLPTTSGFSASITSWKVQTSSQTLENQEPARQQNLRRASSKFT 514
Query: 1460 KEQRRSACLVTSVG-------SDPSRDKLGSVFSNKDVDIFNEEKRLAKRFGNAITKNTE 1618
+Q S L+ VG S ++ + FS K V++ + RL K + +N +
Sbjct: 515 NQQIGSGRLMPLVGPVSGTSKSVNTKADISESFSCK-VNVPEGDVRLGKGGTESKPRNDD 573
Query: 1619 DSKTEIRSLVKLNLKCLTRDKQLGADTFKLVARQATHTILAACTSKQQSSI 1771
++K+EI+SLVKLN+ L KQLG D FK VAR AT+TILAAC K +
Sbjct: 574 NAKSEIQSLVKLNMNLLKGVKQLGVDEFKEVARLATYTILAACGFKHSRHV 624
>ref|XP_003549584.1| PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger
domain-containing protein 1-like [Glycine max]
Length = 182
Score = 248 bits (632), Expect = 6e-63
Identities = 112/148 (75%), Positives = 121/148 (81%)
Frame = +2
Query: 185 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPKHGVFSSSRD 364
ICYAE GVSIAGEIDCC+H+FCFVCIMEWAKHESRCPICRQRFSNV R P HGVFSSSRD
Sbjct: 30 ICYAESGVSIAGEIDCCSHHFCFVCIMEWAKHESRCPICRQRFSNVRRLPMHGVFSSSRD 89
Query: 365 VKVPLRDQVYHPYGNMTSGPVGSYAEVKCSICQVGTDENXXXXXXXXXTASHTYCVGLGY 544
VKVP RDQ+YHP+GNM +GP SY E KC +C GTDE+ TASHTYCVGLGY
Sbjct: 90 VKVPHRDQLYHPHGNMATGPADSYTETKCGVCHAGTDEHLLLLCDLCDTASHTYCVGLGY 149
Query: 545 TVPEGDWFCHDCAISRETNAIANEESDQ 628
TVPEGDWFCHDCAISR+ N E+SDQ
Sbjct: 150 TVPEGDWFCHDCAISRKIN--IKEDSDQ 175
>ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|195646974|gb|ACG42955.1|
PHD-finger family protein [Zea mays]
gi|413953705|gb|AFW86354.1| PHD-finger family protein
[Zea mays]
Length = 733
Score = 193 bits (491), Expect = 1e-46
Identities = 185/672 (27%), Positives = 280/672 (41%), Gaps = 120/672 (17%)
Frame = +2
Query: 185 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPKHGVFSSSRD 364
ICY + +I GE+DCC H+FCFVCIM W + ESRCP CR RF + RPP G F R
Sbjct: 41 ICYLDGRRAIRGELDCCAHFFCFVCIMAWGRVESRCPFCRARFHTIRRPPVAGRFPDERI 100
Query: 365 VKVPLRDQVYHPYGNMTSGPVGS-YAEVKCSICQVGTDENXXXXXXXXXTASHTYCVGLG 541
V + R+QV+HP GN +S G Y C++C +D+ +A+HTYCVGLG
Sbjct: 101 VSIQERNQVHHPQGNGSSIVGGDPYVNTICTVCSSSSDDELLLLCELCDSAAHTYCVGLG 160
Query: 542 YTVPEGDWFCHDCAISRE-----------------------------TNAIANEESDQQN 634
TVPEGDWFC DC R+ + + +E+ D +
Sbjct: 161 TTVPEGDWFCKDCGTIRDDQLRWQAENQGEFEISMDVPGAEPVPAPSISGVVDEDHDLER 220
Query: 635 VV------PTAEPGATILSIVR---GTSSQVVRRPRASPLRQNHSSSSVNPSLDTVSRFK 787
T +P +I IV TS+ + RR A + +S+ T R
Sbjct: 221 PYARSGGGSTDDPVPSIYEIVGDDFATSAGIFRRRIAEDIGSQGTSAGSQCPRSTQGRDN 280
Query: 788 G----KNHVS-GVQRAQ---------RNVQVLRENWTALRSGSLKFHCNXXXXXXXXXXX 925
G H+ V+RA+ + ++ LRENW ALR+GS+ F +
Sbjct: 281 GLAAYHAHIRLEVERARTLRNSRNLDKRIRELRENWAALRAGSVGFAPHMPVRRRKDMAG 340
Query: 926 XXXXXLPCGK------LDVSHSRASTGL-------QQSTVLGGHSSNMSNDKGLKDVDKA 1066
+ L + A+ + +++ GHS + K +D KA
Sbjct: 341 SASVATEHQRYAEPVTLSSRNGAAAASVPLPMPFSEETNTSLGHSKKVL-QKDTRDARKA 399
Query: 1067 WKMMDRAKMMQRTHRTGKIPQGVD--DPSSSGATEISFAHCN------NPELKN---QQP 1213
WK ++ AK +T K P ++ P S G S++ + N L++ QQ
Sbjct: 400 WKRLEMAK-SSGGRKTSKTPASINCCPPFSMGNRSTSYSPIDTIVGHKNGNLRSKSCQQN 458
Query: 1214 RTLDLRYTRME--------KQCDYSSLNKSLENHRSPMLGQKRQSRFTCEMVQHLRDHTS 1369
++ T++E + C N +H + Q R ++ + H
Sbjct: 459 YSICGHVTKVEHTLPTNNSRGCHSLPENSRALDHERMVSSQNRINQESFSGKVASSTHIQ 518
Query: 1370 HSE-----GYSGHPLPRKIHSHGAPCHEDGERNVVKEQRRSACLVTSVGS---------- 1504
H + ++ H P K+ S + G + S L +SVGS
Sbjct: 519 HVDQALVSTFNTH-RPEKLVSDMLHPLKYGSSSGQSAVTSSLQLGSSVGSGSQSTMPVNP 577
Query: 1505 -DPS----RDKLGSVFSNKDVDIFNEE---KRLAKRFGNAITKNTED----SKTEIRSLV 1648
+PS D ++ K + E K ++R + +K + +K+EI SL
Sbjct: 578 EEPSAVCAEDIAATIEVTKSSSLDQHERKRKHSSERCSDQRSKRSRSTCKIAKSEISSLA 637
Query: 1649 KLNLKCLTRDKQLGADTFKLVARQATHTILAACTSKQQSS--------ICSHTDHILQFH 1804
LK L DK G+D FK VAR ATH+ILAAC + S +C H+ + Q +
Sbjct: 638 IRELKLLKIDKTHGSDRFKEVARTATHSILAACRFEHSPSQSLALSRPVCKHSPKVKQLN 697
Query: 1805 KSNLMPDCCRQC 1840
S+ + D CR+C
Sbjct: 698 -SSAITDFCREC 708
>ref|XP_003563953.1| PREDICTED: uncharacterized protein LOC100828773 [Brachypodium
distachyon]
Length = 726
Score = 181 bits (460), Expect = 5e-43
Identities = 176/653 (26%), Positives = 252/653 (38%), Gaps = 124/653 (18%)
Frame = +2
Query: 185 ICYAERGVSIAGEIDCCNHYFCFVCIMEWAKHESRCPICRQRFSNVCRPPKHGVFSSSRD 364
IC + +I GE+DCC H+FCFVCIM WA+ ESRCP C+ RF + RPP G F S R
Sbjct: 37 ICLTDSRRAIRGELDCCAHHFCFVCIMAWARVESRCPFCKARFRTIRRPPVPGRFPSERL 96
Query: 365 VKVPLRDQVYHPYGNMTS-GPVGSYAEVKCSICQVGTDENXXXXXXXXXTASHTYCVGLG 541
V V R+QVYHP GN +S Y CS+C DE A+HTYCVGLG
Sbjct: 97 VTVAERNQVYHPRGNESSLVNTDPYVNSSCSMCNCSRDEELLLLCELCDAAAHTYCVGLG 156
Query: 542 YTVPEGDWFCHDCAISRETNAIANEE----SDQ-----QNVVPTAEPGA---TILSIVRG 685
TVPEGDWFC DCA S+E ++ + SDQ VP+AEP A ++
Sbjct: 157 TTVPEGDWFCKDCATSKEEHSRCEIDDAGSSDQGEFEITTEVPSAEPVADPTIFYTVDEA 216
Query: 686 TSSQVVRRPRASP-------------------------LRQNHSSSSVNPSLD------- 769
S VRR AS R N S+ ++ D
Sbjct: 217 YSLSSVRRANASSSGHFLVDSVPSIYDIVDEDYATNRVCRSNVRSTRLDRKADDFRPSTS 276
Query: 770 --------------------TVSRFKGK--NHVSGVQRAQRNVQVLRENWTALRSGSLKF 883
+++RF+ + + + + LRENW ALR+GS+ F
Sbjct: 277 SDESYCHETPQERTSGRTFHSLARFRVEKARTLPNSRNLSNRIMALRENWPALRAGSVGF 336
Query: 884 HCNXXXXXXXXXXXXXXXXLPCGKLDVSHSRASTGLQQSTVLGGHSSNMSNDKGLKDVDK 1063
+ L S + + ++T + H++ +S K V K
Sbjct: 337 ATH----------------LHNNSATSSVNEHQHSIGETTTMSEHANKIS-PKETSHVRK 379
Query: 1064 AWKMMDRAKMMQRTHRTGKIPQGVD--------DPSSSGATEISFAHCNNPELKNQQPRT 1219
AWKM++ AK + K P D + SSS + N L N+ +
Sbjct: 380 AWKMLEMAKSAGERKKCNK-PSSPDCTPRFSMGNRSSSCCPIDTILGQMNQTLSNEVAQR 438
Query: 1220 LDLRYTRMEKQCDYSSLNKSLENHRSPM---------LGQKR------------------ 1318
++Y R K+ + + N + P+ +G R
Sbjct: 439 NTVKYGRGSKKDNTLPKKDNEGNCKLPVSYHVLAHERMGSSRDRMVNLEGPNDRVASSSH 498
Query: 1319 ------QSRFTCEMVQHLRDHTSHSEGYSGHPLPRKIHSHGAPCHEDGERNVVKEQRRSA 1480
S +C + H+ H + HPL S + +S+
Sbjct: 499 SEHVDQMSEASCGVKVASSSHSQHIDQTLLHPLANNSLSSARSTVTSALQFASNAGSQSS 558
Query: 1481 CLVTSVGSDPSRDKLGS---------VFSNKDVDIFNEEKRLAKRFGNAITKNTEDSKT- 1630
+V G+ D S V + K + F + ++ S+T
Sbjct: 559 TMVKPEGTSAVCDATTSNEIGIAGATVQARKGSGPDCHGSKRKHCFETCDGQGSKKSRTS 618
Query: 1631 ------EIRSLVKLNLKCLTRDKQLGADTFKLVARQATHTILAACTSKQQSSI 1771
EI S+ LK L DK G+D FK VAR ATHT+LA+C + S+
Sbjct: 619 CKIAKAEISSMAMRELKLLKIDKTHGSDRFKEVARAATHTVLASCGLEHSPSL 671