BLASTX nr result

ID: Glycyrrhiza23_contig00009736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009736
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073...   157   1e-36
ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp....   157   1e-36
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   157   1e-36
ref|NP_188898.1| RNA pol II accessory factor CDC73-like protein ...   157   1e-36
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        156   3e-36

>ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073460|gb|ACJ85089.1|
           unknown [Medicago truncatula]
           gi|355512117|gb|AES93740.1| Parafibromin [Medicago
           truncatula] gi|388521181|gb|AFK48652.1| unknown
           [Medicago truncatula]
          Length = 398

 Score =  157 bits (398), Expect = 1e-36
 Identities = 73/77 (94%), Positives = 76/77 (98%)
 Frame = +1

Query: 1   KPEDWDRVVAVFVLGKEWQFKEWPFKDHVDIFNKIIGFFMRFEDDSIESAKTVKQWNVKI 180
           KPEDWDRVVAVFVLGK+WQFK+WPFKDHV+IFNKI GFFMRFEDDSIESAKTVKQWNVKI
Sbjct: 307 KPEDWDRVVAVFVLGKDWQFKDWPFKDHVEIFNKITGFFMRFEDDSIESAKTVKQWNVKI 366

Query: 181 ISISKNKRHQDRAAALE 231
           ISISKNKRHQDRAAALE
Sbjct: 367 ISISKNKRHQDRAAALE 383


>ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329212|gb|EFH59631.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  157 bits (397), Expect = 1e-36
 Identities = 72/77 (93%), Positives = 77/77 (100%)
 Frame = +1

Query: 1   KPEDWDRVVAVFVLGKEWQFKEWPFKDHVDIFNKIIGFFMRFEDDSIESAKTVKQWNVKI 180
           KP+DWDRVVAVFVLGK+WQFK+WPFKDHV+IFNKIIGFF+RFEDDSIESAKTVKQWNVKI
Sbjct: 323 KPDDWDRVVAVFVLGKDWQFKDWPFKDHVEIFNKIIGFFLRFEDDSIESAKTVKQWNVKI 382

Query: 181 ISISKNKRHQDRAAALE 231
           ISISKNKRHQDRAAALE
Sbjct: 383 ISISKNKRHQDRAAALE 399


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
           gi|223543744|gb|EEF45272.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  157 bits (397), Expect = 1e-36
 Identities = 73/77 (94%), Positives = 76/77 (98%)
 Frame = +1

Query: 1   KPEDWDRVVAVFVLGKEWQFKEWPFKDHVDIFNKIIGFFMRFEDDSIESAKTVKQWNVKI 180
           K EDWDRVVAVFVLGKEWQFK+WPFKDHV+IFNKIIGFFMRFEDDS+ESAKTVKQWNVKI
Sbjct: 318 KAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKTVKQWNVKI 377

Query: 181 ISISKNKRHQDRAAALE 231
           ISISKNKRHQDRAAALE
Sbjct: 378 ISISKNKRHQDRAAALE 394


>ref|NP_188898.1| RNA pol II accessory factor CDC73-like protein [Arabidopsis
           thaliana] gi|11994291|dbj|BAB01474.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|17529302|gb|AAL38878.1| unknown protein [Arabidopsis
           thaliana] gi|23296828|gb|AAN13180.1| unknown protein
           [Arabidopsis thaliana] gi|332643135|gb|AEE76656.1| RNA
           pol II accessory factor CDC73-like protein [Arabidopsis
           thaliana]
          Length = 415

 Score =  157 bits (397), Expect = 1e-36
 Identities = 72/77 (93%), Positives = 77/77 (100%)
 Frame = +1

Query: 1   KPEDWDRVVAVFVLGKEWQFKEWPFKDHVDIFNKIIGFFMRFEDDSIESAKTVKQWNVKI 180
           KP+DWDRVVAVFVLGK+WQFK+WPFKDHV+IFNKIIGFF+RFEDDSIESAKTVKQWNVKI
Sbjct: 324 KPDDWDRVVAVFVLGKDWQFKDWPFKDHVEIFNKIIGFFLRFEDDSIESAKTVKQWNVKI 383

Query: 181 ISISKNKRHQDRAAALE 231
           ISISKNKRHQDRAAALE
Sbjct: 384 ISISKNKRHQDRAAALE 400


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  156 bits (394), Expect = 3e-36
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +1

Query: 1   KPEDWDRVVAVFVLGKEWQFKEWPFKDHVDIFNKIIGFFMRFEDDSIESAKTVKQWNVKI 180
           KP+DWDRVVAVFVLGKEWQFK+WPFKDHV+IFNKIIGFFMRFEDDS+ES KTVKQWNVKI
Sbjct: 298 KPDDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSLESCKTVKQWNVKI 357

Query: 181 ISISKNKRHQDRAAALE 231
           ISISKNKRHQDRAAAL+
Sbjct: 358 ISISKNKRHQDRAAALD 374


Top