BLASTX nr result

ID: Glycyrrhiza23_contig00009615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009615
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max] gi|73...   327   5e-87
ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Gl...   324   3e-86
gb|AFK35675.1| unknown [Lotus japonicus]                              314   3e-83
ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycin...   297   3e-78
ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycin...   295   2e-77

>ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max]
           gi|73919939|sp|Q8LJS2.1|HDT1_SOYBN RecName: Full=Histone
           deacetylase HDT1; AltName: Full=Histone deacetylase 2a;
           Short=HD2a; AltName: Full=Nucleolar histone deacetylase
           HD2-p39 gi|22597156|gb|AAN03465.1| nucleolar histone
           deacetylase HD2-P39 [Glycine max]
          Length = 295

 Score =  327 bits (837), Expect = 5e-87
 Identities = 180/299 (60%), Positives = 199/299 (66%), Gaps = 10/299 (3%)
 Frame = +2

Query: 104 MEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKLVLGT 283
           MEFWGVEVKV QTV VDP DP+D YIH+SQVALGEAKKDK +EPVVLYLKV  QK+VLGT
Sbjct: 1   MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 284 LSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVI---HXXXXXXXXXXXXXXLALM 454
           LSRD  PHLSLD+VLD +SELSH SK+ASV+FCGYKV+                  LAL 
Sbjct: 61  LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEELALE 120

Query: 455 DQENGKPETKAEVAKVSKSGK--PVTGASAKQVKIVDPKKXXXXXXXXXXXXXXXXXXXX 628
            Q+NGKPE KAE AKV+K  K  P  GA A   K  DPKK                    
Sbjct: 121 GQDNGKPELKAEGAKVTKPSKSIPKIGAPA---KAADPKKDEDDDSDDESDDDLAGEDES 177

Query: 629 A-----XXXXXXXXXXXXXXXXTPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKTDGK 793
                                 TPAKKV+QGKKRPNESA+KTP+  KKAK ATPEKTDGK
Sbjct: 178 GSSDEMDDDSNSEEESDGDDEETPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGK 237

Query: 794 KGVHTATPHPMKKGGKTPNSVAKDKTPNSGGQLSCQSCNKSFTSESGFQQHKQAKHGGK 970
           K VH ATPHP KKGGKTPNS  K +TPNS GQLSC SC KSFT+E+G QQHK+AKHGG+
Sbjct: 238 KSVHVATPHPSKKGGKTPNS-TKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHGGQ 295


>ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Glycine max]
          Length = 295

 Score =  324 bits (830), Expect = 3e-86
 Identities = 176/297 (59%), Positives = 200/297 (67%), Gaps = 4/297 (1%)
 Frame = +2

Query: 92  MEAPMEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKL 271
           M+APMEFWGVEVKV QTV VDP DP+D YIH+SQVALGEAKK+K +E VVLYLKV  QK+
Sbjct: 1   MDAPMEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKEKPNESVVLYLKVGEQKI 60

Query: 272 VLGTLSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVI--HXXXXXXXXXXXXXXL 445
           VLGTLSRD  PHLSLD+VLD +SELSH SK+ASV+FCGY+V+                 L
Sbjct: 61  VLGTLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYRVLTGGNNASDFSDSEEDEEL 120

Query: 446 ALMDQENGKPETKAEVAKVSKSGKPVTGASAKQVKIVDPKK--XXXXXXXXXXXXXXXXX 619
           AL  Q+NGKPE K E AKV+K  KPV    A   K  DPKK                   
Sbjct: 121 ALEGQDNGKPEIKDEGAKVTKPSKPVPKIGA-PAKTADPKKDEGDDSDDESDDDLAGEDE 179

Query: 620 XXXAXXXXXXXXXXXXXXXXTPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKTDGKKG 799
              +                TPAKKV+QGKKRPNESA+KTPV  KKAK ATPEKT+GKK 
Sbjct: 180 FGSSDEMDDDSDSDEESDEETPAKKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKN 239

Query: 800 VHTATPHPMKKGGKTPNSVAKDKTPNSGGQLSCQSCNKSFTSESGFQQHKQAKHGGK 970
           VH ATPHP KKGGKTPNS  K ++P+S GQLSC SC KSFT+E G QQHK+AKHGG+
Sbjct: 240 VHVATPHPSKKGGKTPNS-TKGQSPSSAGQLSCASCKKSFTNEVGLQQHKKAKHGGQ 295


>gb|AFK35675.1| unknown [Lotus japonicus]
          Length = 297

 Score =  314 bits (804), Expect = 3e-83
 Identities = 176/297 (59%), Positives = 200/297 (67%), Gaps = 11/297 (3%)
 Frame = +2

Query: 92  MEAPMEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEA-KKDKASEPVVLYLKVDGQK 268
           MEAPMEFWGVEVKV QTVKV+P++P  GYIH+SQ ALGEA KKDKA+EPV+LYLKV+ +K
Sbjct: 1   MEAPMEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKK 60

Query: 269 LVLGTLSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVI-HXXXXXXXXXXXXXXL 445
            VLGTL+RDD PHLS+D+VLD +SELSHNSK ASVYFCGYKV+                 
Sbjct: 61  YVLGTLNRDDVPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTDDGDASDFSESDEEEE 120

Query: 446 ALMDQENGKPETKAEVAKVSKSGKP--VTGASAKQVKIVDPKKXXXXXXXXXXXXXXXXX 619
            LM+QENGKPETK E AKV+K+ KP    G SAKQVKIVDPKK                 
Sbjct: 121 ELMEQENGKPETKTEDAKVAKTAKPAAAAGPSAKQVKIVDPKKDEEEADLDVSSPDVSGY 180

Query: 620 XXXA------XXXXXXXXXXXXXXXXTPAKKVNQGKKRPNESASKTPVPTKKAKNATPEK 781
                                     TPAKKV+QGKKRPNESASKTPV  KKAKNATPEK
Sbjct: 181 EDDLISADEDSDDESDDESDDEEETPTPAKKVDQGKKRPNESASKTPVSGKKAKNATPEK 240

Query: 782 TDGKKGVHTATPHPMKKGGKTPNSVAKDKTPNSGGQLSCQS-CNKSFTSESGFQQHK 949
            DGKK VHTATPHP K+ GKTPNS  K+K+PNSGG+ S +S  +K F S  G +Q K
Sbjct: 241 PDGKKNVHTATPHPKKQDGKTPNSFGKNKSPNSGGKFSNKSGGSKPFNSNKGGRQKK 297


>ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycine max]
           gi|255641453|gb|ACU21002.1| unknown [Glycine max]
          Length = 306

 Score =  297 bits (761), Expect = 3e-78
 Identities = 171/308 (55%), Positives = 200/308 (64%), Gaps = 19/308 (6%)
 Frame = +2

Query: 104 MEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKLVLGT 283
           MEFWG EVKV ++VKVDPA+  +  IH+SQ ALGEAKKDK  EPVVLY+KV  QK VLGT
Sbjct: 1   MEFWGAEVKVGESVKVDPAE-FEACIHLSQAALGEAKKDKP-EPVVLYMKVGEQKFVLGT 58

Query: 284 LSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVIH-----XXXXXXXXXXXXXXLA 448
           LSR+  P +SL++VL+KE ELSH+SK+ASV+FCGYK  +                   + 
Sbjct: 59  LSREKIPQISLELVLEKEFELSHSSKSASVHFCGYKAYYDADNSDEDEFTDSDEDDEDVP 118

Query: 449 LMDQENGKPETKAEVAKVSKSGKPVTGA--SAKQVKIVDPKK----XXXXXXXXXXXXXX 610
           L++ ENGKPETKAE  KV +S K V  A  SAKQVK+V+PKK                  
Sbjct: 119 LINTENGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKKDNEEDSDDDSDDDDFGSS 178

Query: 611 XXXXXXAXXXXXXXXXXXXXXXXTPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKTDG 790
                 A                TP KKV+ GKKRPNESASKTPV +KKAKNATPEKTDG
Sbjct: 179 DEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESASKTPVSSKKAKNATPEKTDG 238

Query: 791 KKGVHTATPHPMKKGGKTPNSVAKDKTPNS--------GGQLSCQSCNKSFTSESGFQQH 946
           KKG HTATPHP KKGGKTPN  AK KTPNS         G LSC++C+KSFT+ESG QQH
Sbjct: 239 KKGGHTATPHPAKKGGKTPNREAKAKTPNSEAKAKTPKSGGLSCKTCSKSFTNESGLQQH 298

Query: 947 KQAKHGGK 970
            +AKHGG+
Sbjct: 299 NKAKHGGQ 306


>ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycine max]
           gi|255644846|gb|ACU22923.1| unknown [Glycine max]
          Length = 307

 Score =  295 bits (755), Expect = 2e-77
 Identities = 169/308 (54%), Positives = 195/308 (63%), Gaps = 19/308 (6%)
 Frame = +2

Query: 104 MEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKLVLGT 283
           MEFWG EVKV ++VKVDPA+  +  IH+SQ ALGEAKKDK++EPVVLYLKV  QK VLGT
Sbjct: 1   MEFWGAEVKVGESVKVDPAE-FEACIHLSQAALGEAKKDKSNEPVVLYLKVGQQKFVLGT 59

Query: 284 LSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVIH---XXXXXXXXXXXXXXLALM 454
           LSR+  P + L++VL+KE ELSHNSK ASV+FCGYK  +                 + L+
Sbjct: 60  LSREKIPQIPLELVLEKEFELSHNSKNASVHFCGYKAFYDTGDDSEEDEFTDSEEDVPLL 119

Query: 455 DQENGKPETKAEVAKVSKSGKPV--TGASAKQVKIVDPKKXXXXXXXXXXXXXXXXXXXX 628
             ENGKPETKAE  KV +S K V    ASAKQVKIV+PKK                    
Sbjct: 120 KAENGKPETKAEELKVPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDEDDDFGSSD 179

Query: 629 A--------XXXXXXXXXXXXXXXXTPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKT 784
                                       KK + GKKRPNESASKTPV +KKAKNATPEKT
Sbjct: 180 EEMEDADSDSDDESDDKEDDDEETHPKNKKADLGKKRPNESASKTPVSSKKAKNATPEKT 239

Query: 785 DGKKGVHTATPHPMKKGGKTPNSVAKDKTPNS------GGQLSCQSCNKSFTSESGFQQH 946
           DGKKG HTATPHP KKGGKTP+S AK KTPN+       G LSC+SC+KSF SESG QQH
Sbjct: 240 DGKKGGHTATPHPAKKGGKTPSSEAKAKTPNNEAKTPMSGGLSCKSCSKSFNSESGLQQH 299

Query: 947 KQAKHGGK 970
            +AKHGG+
Sbjct: 300 NKAKHGGQ 307


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