BLASTX nr result

ID: Glycyrrhiza23_contig00009573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009573
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46219.1| unknown [Medicago truncatula]                          285   1e-74
ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycin...   285   1e-74
dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]                       276   8e-72
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...   270   6e-70
ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|2...   261   3e-67

>gb|AFK46219.1| unknown [Medicago truncatula]
          Length = 168

 Score =  285 bits (730), Expect = 1e-74
 Identities = 145/167 (86%), Positives = 151/167 (90%)
 Frame = +2

Query: 242 MATATXXXXXXXXRLYKDYLQDPKSAXXXXXXIEGTYICFGGNYTTSDILPSLEEQGVRQ 421
           MATAT        RLYKDY+QDP+SA      IEGTYICFGG+YTTSD+LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYVQDPESAPEPPPPIEGTYICFGGSYTTSDVLPSLEEQGVRQ 60

Query: 422 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 601
           LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL
Sbjct: 61  LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 602 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 742
           RPHQARATLIHILELQIERRKQA EDI RRREEAR++LNESLATLDG
Sbjct: 121 RPHQARATLIHILELQIERRKQAAEDINRRREEARRILNESLATLDG 167


>ref|NP_001241256.1| uncharacterized protein LOC100792250 [Glycine max]
           gi|255645739|gb|ACU23363.1| unknown [Glycine max]
          Length = 168

 Score =  285 bits (729), Expect = 1e-74
 Identities = 143/167 (85%), Positives = 151/167 (90%)
 Frame = +2

Query: 242 MATATXXXXXXXXRLYKDYLQDPKSAXXXXXXIEGTYICFGGNYTTSDILPSLEEQGVRQ 421
           MATAT        RLYKDYLQDP SA      IEGTY+CFG NYTTSD+LP+LEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYLQDPNSAPDPPPPIEGTYLCFGANYTTSDVLPTLEEQGVRQ 60

Query: 422 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 601
           LYSKGPN+DFKKELRSLNGELQLH+LELADILIERPSQYARRVEEISTVFKNLHHLLNSL
Sbjct: 61  LYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 602 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 742
           RPHQARATLIHILELQI+RRKQAVEDIK+RREEAR+LLNESLATLDG
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKKRREEARRLLNESLATLDG 167


>dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]
          Length = 168

 Score =  276 bits (705), Expect = 8e-72
 Identities = 141/167 (84%), Positives = 146/167 (87%)
 Frame = +2

Query: 242 MATATXXXXXXXXRLYKDYLQDPKSAXXXXXXIEGTYICFGGNYTTSDILPSLEEQGVRQ 421
           MATAT        RLYKDYLQ+P SA      IEGTY+CFG NYTTSD+LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYLQNPDSAPEPPPPIEGTYVCFGANYTTSDVLPSLEEQGVRQ 60

Query: 422 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 601
           LYSKGPNIDFKKELRSLN ELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL
Sbjct: 61  LYSKGPNIDFKKELRSLNAELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 602 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 742
           RPHQARATLIHILELQI+RRKQAVEDIKRRREEAR LL E+L  LDG
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRRREEARSLLKEALTILDG 167


>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score =  270 bits (689), Expect = 6e-70
 Identities = 135/167 (80%), Positives = 146/167 (87%)
 Frame = +2

Query: 242 MATATXXXXXXXXRLYKDYLQDPKSAXXXXXXIEGTYICFGGNYTTSDILPSLEEQGVRQ 421
           MATAT        +LYKDYLQDPKSA      IEGTY+CFG NYTT D+LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 422 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 601
           LY +GPN+D+KKELRSLN ELQLHILELADIL+ERPSQYARRVEEIS +FKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 602 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 742
           RPHQARATLIHILELQIERR+QAVEDIKRRREEA++LL ESL TLDG
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQRLLMESLETLDG 167


>ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|222867982|gb|EEF05113.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  261 bits (666), Expect = 3e-67
 Identities = 129/167 (77%), Positives = 144/167 (86%)
 Frame = +2

Query: 242 MATATXXXXXXXXRLYKDYLQDPKSAXXXXXXIEGTYICFGGNYTTSDILPSLEEQGVRQ 421
           MATAT        RLYKDY+++PKSA      IEGTY+CF  +YTT D+LPSLEEQGVRQ
Sbjct: 1   MATATFPPPPPFYRLYKDYIENPKSAPEPPPPIEGTYVCFASSYTTDDVLPSLEEQGVRQ 60

Query: 422 LYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 601
           LY KGPN+DFKKELRSLN ELQLHILELAD+L+ERPSQYARRVE+IS +FKNLHHLLNSL
Sbjct: 61  LYPKGPNVDFKKELRSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 602 RPHQARATLIHILELQIERRKQAVEDIKRRREEARKLLNESLATLDG 742
           RPHQARATLIHILELQI+RRKQAVEDIKR+REEA+KLL E+L TL G
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRQREEAQKLLKEALGTLAG 167


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