BLASTX nr result

ID: Glycyrrhiza23_contig00009567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009567
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606484.1| RNA ligase isoform [Medicago truncatula] gi|...   274   3e-71
emb|CAN61817.1| hypothetical protein VITISV_015154 [Vitis vinifera]   239   5e-61
ref|XP_003606478.1| RNA ligase isoform [Medicago truncatula] gi|...   220   3e-55
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        217   3e-54
ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, par...   216   5e-54

>ref|XP_003606484.1| RNA ligase isoform [Medicago truncatula]
           gi|355507539|gb|AES88681.1| RNA ligase isoform [Medicago
           truncatula]
          Length = 276

 Score =  274 bits (700), Expect = 3e-71
 Identities = 154/227 (67%), Positives = 173/227 (76%), Gaps = 4/227 (1%)
 Frame = +1

Query: 271 MPRNQRNGG-HREQRWKQKPKTEGQLSAAIRDGAEVAEETVITNRLGGMHIGEHSGQTSG 447
           MPRNQR+ G H EQRWK+KPKTE Q+SA       + +   +TN+L  +HIGE+S QT  
Sbjct: 1   MPRNQRSSGLHGEQRWKEKPKTEPQVSA-------IGDAETVTNKLSALHIGENSAQTK- 52

Query: 448 VQHANKGSGGSAQGPMAIWKPKSYXXXXXXXXXXEVENTPVGK--VTGVGA-DVASTQKN 618
           VQ+ NK    ++QG  AIWKPKSY          EVE+TPV K  V G+G   VASTQK 
Sbjct: 53  VQNVNKVV--NSQGSTAIWKPKSYGTVSGGANVTEVESTPVSKAKVDGLGGVAVASTQK- 109

Query: 619 NSSNSSAGLSKLFRSSVLENFTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSK 798
             S+ S  LSKLF  ++LENFTVD+STYA ARIRATFYPKFENEKSDQETR+RMIELVSK
Sbjct: 110 -ISSGSVALSKLFSGNLLENFTVDSSTYAQARIRATFYPKFENEKSDQETRSRMIELVSK 168

Query: 799 GLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF 939
           GL TLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF
Sbjct: 169 GLLTLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF 215


>emb|CAN61817.1| hypothetical protein VITISV_015154 [Vitis vinifera]
          Length = 2186

 Score =  239 bits (611), Expect = 5e-61
 Identities = 141/255 (55%), Positives = 170/255 (66%), Gaps = 11/255 (4%)
 Frame = +1

Query: 208  KSRTFLFLPFAHPYLTLPPSPMPRNQRNGGHREQRWKQKPKTEGQLSAAIRDGAEVAEET 387
            K R F+F    +   ++  S M  N+R G +R+Q+WKQK K   + S +++  +  AE  
Sbjct: 887  KLRAFIFSRSLNLRRSISDSVMSSNERRGTNRKQKWKQKSKPNKK-SPSMQSASXAAE-- 943

Query: 388  VITNRLGGMHIGEHSGQTSGVQHANKGSGG-------SAQGPMAIWKPKSYXXXXXXXXX 546
             +TNR GG+ + E SGQT  V   +   G          QG  AIWKPKS+         
Sbjct: 944  AVTNRFGGLAVDESSGQTYQVPDPSVQFGSVLPADLAPVQGQEAIWKPKSFGTVSGARSV 1003

Query: 547  XEVENTPVGK----VTGVGADVASTQKNNSSNSSAGLSKLFRSSVLENFTVDNSTYAHAR 714
             EVE TP+ K    + G GA++A  +K     S AGLSKLF S+ L +FTVDNSTY+ A+
Sbjct: 1004 -EVEKTPIDKTGVEILGNGAEMAVAEK-----SCAGLSKLFSSNALADFTVDNSTYSLAQ 1057

Query: 715  IRATFYPKFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFG 894
            IRATFYPKFENEKSDQE RTRMIE+VSKGLATLEVSLKHSGSLFMYAG EGGAYAKNS+G
Sbjct: 1058 IRATFYPKFENEKSDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGPEGGAYAKNSYG 1117

Query: 895  NIYTAVGVFVLGRMF 939
            NIYTAVGVFVLGRMF
Sbjct: 1118 NIYTAVGVFVLGRMF 1132


>ref|XP_003606478.1| RNA ligase isoform [Medicago truncatula]
           gi|355507533|gb|AES88675.1| RNA ligase isoform [Medicago
           truncatula]
          Length = 1237

 Score =  220 bits (561), Expect = 3e-55
 Identities = 123/167 (73%), Positives = 133/167 (79%), Gaps = 3/167 (1%)
 Frame = +1

Query: 448 VQHANKGSGGSAQGPMAIWKPKSYXXXXXXXXXXEVENTPVGK--VTGVGA-DVASTQKN 618
           VQ+ NK    ++QG  AIWKPKSY          EVE+TPV K  V G+G   VASTQK 
Sbjct: 14  VQNVNKVV--NSQGSTAIWKPKSYGTVSGGANVTEVESTPVSKAKVDGLGGVAVASTQK- 70

Query: 619 NSSNSSAGLSKLFRSSVLENFTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSK 798
             S+ S  LSKLF  ++LENFTVD+STYA ARIRATFYPKFENEKSDQETR+RMIELVSK
Sbjct: 71  -ISSGSVALSKLFSGNLLENFTVDSSTYAQARIRATFYPKFENEKSDQETRSRMIELVSK 129

Query: 799 GLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF 939
           GL TLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF
Sbjct: 130 GLLTLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF 176


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  217 bits (553), Expect = 3e-54
 Identities = 132/248 (53%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
 Frame = +1

Query: 223 LFLPFAHPYLTLPPSPMPRNQRNGGHREQRWKQKPKTE---GQLSAAIRDGAEVAEETVI 393
           +F PF  P      S MP NQ  GG+  ++W+ +P +    G  S      A  AE   I
Sbjct: 30  IFFPFQSPSFHTFSSLMPNNQERGGYEGKKWQVRPSSNRVPGSSSNVEPVSAATAE--AI 87

Query: 394 TNRLGGMHIGEHSGQTS-GVQHANKGSGGSA-QGPM----AIWKPKSYXXXXXXXXXXEV 555
           T+RL  + I E   Q+S  V     GS G A Q P+     IWKPKSY            
Sbjct: 88  TDRLKSVDITESGAQSSVPVTSLQFGSVGLAPQSPVQHQKVIWKPKSYG----------- 136

Query: 556 ENTPVGKVTGVGADVASTQKNNSSNSSAGLSKLFRSSVLENFTVDNSTYAHARIRATFYP 735
                   T  GA V    K      SA LSKLF+ ++LENFTVDNST++ A++RATFYP
Sbjct: 137 --------TVSGAPVVEAGKTPVEQKSALLSKLFKGNLLENFTVDNSTFSRAQVRATFYP 188

Query: 736 KFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVG 915
           KFENEKSDQE RTRMIE+VSKGLA +EV+LKHSGSLFMYAGHEGGAYAKNSFGNIYTAVG
Sbjct: 189 KFENEKSDQEIRTRMIEMVSKGLAIVEVTLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVG 248

Query: 916 VFVLGRMF 939
           VFVLGRMF
Sbjct: 249 VFVLGRMF 256


>ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, partial [Cucumis sativus]
          Length = 240

 Score =  216 bits (551), Expect = 5e-54
 Identities = 129/235 (54%), Positives = 150/235 (63%), Gaps = 12/235 (5%)
 Frame = +1

Query: 271 MPRNQRNGGHREQRWKQKPKTEGQLSAAIRDGAEVAEETVITNRLGGMHIGEH------- 429
           MP NQR G   EQ+WK+K K +   + +     E A E V+TN LG + + E        
Sbjct: 1   MPYNQRRGSRGEQKWKEKAKADRNSTES-----EAAAE-VVTNALGKLRVTESDQPHVLT 54

Query: 430 -SGQTSGVQHANKGSGGSAQGPMAIWKPKSYXXXXXXXXXXEVENTPVGKVT----GVGA 594
            S Q    Q  N+ + G A    AIWKPK+Y          E E  P  + +    G  A
Sbjct: 55  SSAQFGNAQLTNQATPGLAH--RAIWKPKAYGTTSGAAVI-EGEKAPTNETSTENKGSNA 111

Query: 595 DVASTQKNNSSNSSAGLSKLFRSSVLENFTVDNSTYAHARIRATFYPKFENEKSDQETRT 774
            VA+       +    LS+LF+S+ +E FTVDNSTY  A+IRATFYPKFENEKSDQE RT
Sbjct: 112 GVAA------QDGVVSLSQLFKSNQIEKFTVDNSTYTQAQIRATFYPKFENEKSDQEIRT 165

Query: 775 RMIELVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF 939
           RMIE+VSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF
Sbjct: 166 RMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMF 220


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