BLASTX nr result

ID: Glycyrrhiza23_contig00009392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009392
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase...   372   e-101
ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase...   118   2e-24
ref|XP_002315970.1| predicted protein [Populus trichocarpa] gi|2...   116   8e-24
ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-23
emb|CBI27108.3| unnamed protein product [Vitis vinifera]               92   2e-16

>ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
            [Glycine max]
          Length = 1329

 Score =  372 bits (955), Expect = e-101
 Identities = 212/383 (55%), Positives = 251/383 (65%), Gaps = 42/383 (10%)
 Frame = -2

Query: 1025 QKGRENFPXXXXXXXXXXXXXXXXEADKDATGIKWKNVSSSKRMEAEKKRKNASRERHLS 846
            QKGRE                   EADKDA   K KN SSSKR+E +K RKN SRE+HLS
Sbjct: 134  QKGREFSHSFGSDGAEAVLSLLSEEADKDAICSKCKNASSSKRVEVDK-RKNVSREKHLS 192

Query: 845  LSDKIKTEKKGNLKQHETSSMDLRRDYEKPENKREALTKSENHKKRRDVXXXXXXXXXXS 666
             S+K++TEKKG LK+ E+SS+DLRR+Y K   +REA  KSE+H+KRRD           S
Sbjct: 193  SSEKVETEKKGILKRRESSSVDLRREYGKANQEREAFVKSESHRKRRDASSCSSYYSLSS 252

Query: 665  GDFENDLEVQHETGSEEFSLGYEKDEANHMEGKGKEEFNRQRDEPEKVQDVSNKERIAFG 486
            GDF ++LEVQ E G EE SL YEKDEAN +E + KEEFNRQ D+ +K+Q VSNK RIAFG
Sbjct: 253  GDFGSELEVQDEIGLEELSLEYEKDEANCLE-EVKEEFNRQGDDSKKLQAVSNKGRIAFG 311

Query: 485  ADIDWSIRKKSEKKLTEGTMQETASTREQQDRHSRASMIHESSYGKASISHKRVHSEEDN 306
             DIDW++R KSEKKL EGT+Q T S REQQD HSR    H+S + K+SIS KRV+SEED 
Sbjct: 312  VDIDWNLRNKSEKKLIEGTLQNTESIREQQDMHSREFRTHDSGHKKSSISQKRVNSEEDK 371

Query: 305  SSYVENLDKKTNKAYIQTGNRRKQQSTDIQESSCDEVETTLLSGKTFSGKEGNLKISETL 126
            SS+++NLDKK NKAYIQT NRRK QS D+QES CDEVETTLLS K FSG+EG L+ISET+
Sbjct: 372  SSFIDNLDKKANKAYIQTVNRRKHQSIDVQESGCDEVETTLLSQKKFSGREGKLEISETM 431

Query: 125  LQETSEEHKNFIGSTSTATK---------------------------------------- 66
            L+ET++E+K F+GSTST  K                                        
Sbjct: 432  LKETTDEYKKFVGSTSTTGKETLTSKKAFSGREGNLAISETLSQETNDKHKKIVGSTSTS 491

Query: 65   --DVTDRSLQKYIGNSKIEDTER 3
              DV DRS QKY GN KIEDTER
Sbjct: 492  GRDVIDRSSQKYSGNLKIEDTER 514


>ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
            [Vitis vinifera]
          Length = 1342

 Score =  118 bits (296), Expect = 2e-24
 Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 50/346 (14%)
 Frame = -2

Query: 893  EAEKKRKNASRERHLSLSDKIKTEKKGNL----------------------KQHETSSMD 780
            E   +R   +RE H S  ++++ EK+G+L                      ++ ++  + 
Sbjct: 134  EEVSERCYGARETHGSSYERVRAEKRGDLGNECYRRKKKNVGLGSLECSSKRESQSIIVG 193

Query: 779  LRRDYEKPENKREALTKSENHKKRRD--------VXXXXXXXXXXSGDFENDLE--VQHE 630
             R +  +   ++EA  + EN   R++                   +GD E + E  V+H 
Sbjct: 194  SREEGHRRREEKEASVRIENRGLRKEGSSCSSYYSLSSLGDSESNTGDIEGNQEAPVKHR 253

Query: 629  TGSEEFSLGYEKD----EANHMEGKGKEEFNRQRDEPEKVQDVSNKERIAFGA-----DI 477
                E S GY+KD    E  +++ +  E+F +QRDE E   +V+     + G+      +
Sbjct: 254  GIVRESSSGYKKDSWKTEEGNVDSEVVEKFEKQRDEAEGYGEVAKWGNTSVGSYVVGSGV 313

Query: 476  DWSIRKKSEKKLTEGTMQETASTREQQDRHSRASMIHESSYGKASISHKRVHSEEDNSSY 297
            +W  RKKSEKKL E +++ T S  E  +  S+ S IHES +GK+S   K+ H   +  + 
Sbjct: 314  EWERRKKSEKKLAEVSIERTESMEETSEMDSKVSQIHESGFGKSSGYRKQFHGRGEKLTV 373

Query: 296  VENLDKKTNKAYIQTG---------NRRKQQSTDIQESSCDEVETTLLSGKTFSGKEGNL 144
              NLD++T K Y Q G          R+ Q+ T+  E    +VE T  S K FSG E N+
Sbjct: 374  AGNLDEETRKQYGQKGKLVIGQSESGRKYQRLTESSEVQGSDVERTSGSQKQFSGSEENV 433

Query: 143  KISETLLQETSEEHKNFIGSTSTATKDVTDRSLQKYIGNSKIEDTE 6
              ++ L+Q   EEH           +D   R+ Q++   S+ ++ +
Sbjct: 434  TTAKNLVQGRGEEHGK--KDAHITVQDKLKRNSQQFSETSRTQEVD 477


>ref|XP_002315970.1| predicted protein [Populus trichocarpa] gi|222865010|gb|EEF02141.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  116 bits (291), Expect = 8e-24
 Identities = 100/301 (33%), Positives = 140/301 (46%), Gaps = 15/301 (4%)
 Frame = -2

Query: 860 ERHLSLSDKIKTEKKGNLKQHETSSMDLRRDYEKPE-NKREALTKSENHKKRRDVXXXXX 684
           ER+  LS +++  K+GN   H   +   RR  +    +  E   K E    + ++     
Sbjct: 73  ERYWGLSKRVEMVKRGN---HSGGTRKGRRRKKNVGLSSLEGDAKCEFESAKVELRKEEM 129

Query: 683 XXXXXSGDFENDLEVQHETGSEEFSLGYEKDEAN---HMEGKGKEEFNRQRDEPEKVQDV 513
                 G  E+  +     G E+ S GY K+  +     EG+  EEF R RD  E   +V
Sbjct: 130 EDQERKGRKESGFKRGESQGKEKSSSGYRKELRSGEGRSEGQVVEEFRRHRDGTEWKGEV 189

Query: 512 SNKERIAFGADIDWSIRKKSEKKLTEGTMQETASTREQQDRHSRASMIHESSYGKASISH 333
                 A    ++W  RKKSEKKLTE  ++ET S RE     SR +  HES Y K S SH
Sbjct: 190 LEARTSARRTGVEWDPRKKSEKKLTE--IEETQSERESSQMQSRMARNHESDYRKVSSSH 247

Query: 332 KRVHSEEDNSSYVENLDKKTNKAYIQTGNRRKQQS---------TDIQESSCDEVETTLL 180
            ++   ED  S   NL+K+T K Y Q G++ K+QS         T+ QE S   VE    
Sbjct: 248 NQI-GNEDEKSLAVNLEKETRKRYCQMGDQVKEQSEFRRSYQEITNKQERSGINVEKASQ 306

Query: 179 SGKTFSGKEGNLKISETLLQETSEEHKNFIGSTSTATKDVTDRSLQKYIGNSKIED--TE 6
           S K FSG+E NL +   L+ E  +E    +G   TA K+   R+  + I  S  E+  TE
Sbjct: 307 SQKRFSGREENL-VDANLVWEGRDERYKRVG--ETAAKNNIRRATHQLIDTSTTENASTE 363

Query: 5   R 3
           R
Sbjct: 364 R 364


>ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1|
            predicted protein [Populus trichocarpa]
          Length = 1364

 Score =  115 bits (287), Expect = 2e-23
 Identities = 107/331 (32%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
 Frame = -2

Query: 860  ERHLSLSDKIKTEKKGNLKQHE-----------------------TSSMDLRRDY----- 765
            ER+  LS ++ TEK+GN    +                        ++++LR++      
Sbjct: 179  ERNQGLSKRVGTEKRGNYSGGDHKGRRRKNVGRRSLESDTKCKFGLANVELRKEEFTRKE 238

Query: 764  --EKPENKREALTKSENHKKRRDVXXXXXXXXXXSGDFENDLEVQ--HETGSEEFSLGYE 597
              E  E K+  L       KR             + DFE+D E Q  H    +E S GY+
Sbjct: 239  GSEDREEKKTVLEGENCRGKRGSSSVSSYYSLSSAEDFESDTEAQDEHVDCLKESSHGYK 298

Query: 596  --KDEANHMEGKGKEEFNRQRDEPEKVQDVSNKERIAFGADIDWSIRKKSEKKLTEGTMQ 423
              +     ++G+  EEF R RD  E   +V      +    ++W +RKKSEKKLTE  ++
Sbjct: 299  ELRSGEGRLKGQVVEEFKRHRDGTEWKGEVLEARTSSRRTGVEWDLRKKSEKKLTE--IE 356

Query: 422  ETASTREQQDRHSRASMIHESSYGKASISHKRVHSEEDNSSYVENLDKKTNKAYIQTGNR 243
            ET S RE     SR +   ES Y   S SHK++  EE+ S  V NL+K T K Y Q G+ 
Sbjct: 357  ETRSGRESLQMQSRMARTTESDYKNVSGSHKQIDDEEEKSLAV-NLEKGTRKQYGQMGDP 415

Query: 242  RKQQS---------TDIQESSCDEVETTLLSGKTFSGKEGNLKISETLLQETSEEHKNFI 90
             K+QS         T+ QESS   VETT  S K FSG+E NL +   L+ E  +E    +
Sbjct: 416  VKEQSEFRRNYQEITNKQESSGTNVETTSQSQKRFSGREENL-VDVNLVWEGRDERYE-V 473

Query: 89   GSTSTATKDVTDRSLQKYIGNSKIED--TER 3
            G   TA ++   R+  + I  S +E+  TER
Sbjct: 474  G--ETAAENNIKRNTHQLIDTSTLENVRTER 502


>emb|CBI27108.3| unnamed protein product [Vitis vinifera]
          Length = 1151

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 13/309 (4%)
 Frame = -2

Query: 893 EAEKKRKNASRERHLSLSDKIKTEKKGNLKQHETSSMDLRRDYEKPENKREALTKSENHK 714
           E   +R   +RE H S  ++++ EK+G          DL  +  + + K   L   E   
Sbjct: 27  EEVSERCYGARETHGSSYERVRAEKRG----------DLGNECYRRKKKNVGLGSLECSS 76

Query: 713 KRRDVXXXXXXXXXXSGDFENDLEVQHETGSEEFSLGYEKDEANHMEGKGKEEFNRQRDE 534
           KR                 ++ +    E G        EK+ +  +E +G  +       
Sbjct: 77  KRES---------------QSIIVGSREEGHRRRE---EKEASVRIENRGLRKEGSSCSS 118

Query: 533 PEKVQDVSNKER----IAFGADIDWSIRKKSEKKLTEGTMQETASTREQQDRHSRASMIH 366
              +  + + E     I    +  W  RKKSEKKL E +++ T S  E  +  S+ S IH
Sbjct: 119 YYSLSSLGDSESNTGDIEGNQEAPWERRKKSEKKLAEVSIERTESMEETSEMDSKVSQIH 178

Query: 365 ESSYGKASISHKRVHSEEDNSSYVENLDKKTNKAYIQTG---------NRRKQQSTDIQE 213
           ES +GK+S   K+ H   +  +   NLD++T K Y Q G          R+ Q+ T+  E
Sbjct: 179 ESGFGKSSGYRKQFHGRGEKLTVAGNLDEETRKQYGQKGKLVIGQSESGRKYQRLTESSE 238

Query: 212 SSCDEVETTLLSGKTFSGKEGNLKISETLLQETSEEHKNFIGSTSTATKDVTDRSLQKYI 33
               +VE T  S K FSG E N+  ++ L+Q   EEH           +D   R+ Q++ 
Sbjct: 239 VQGSDVERTSGSQKQFSGSEENVTTAKNLVQGRGEEHGK--KDAHITVQDKLKRNSQQFS 296

Query: 32  GNSKIEDTE 6
             S+ ++ +
Sbjct: 297 ETSRTQEVD 305


Top