BLASTX nr result
ID: Glycyrrhiza23_contig00009389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00009389
(1718 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision... 716 0.0
ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-... 715 0.0
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi... 649 0.0
ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|2... 625 e-177
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-... 620 e-175
>ref|XP_003525938.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-8-like [Glycine max]
Length = 466
Score = 716 bits (1847), Expect = 0.0
Identities = 358/459 (77%), Positives = 377/459 (82%), Gaps = 19/459 (4%)
Frame = +3
Query: 147 HTWKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSPHKGAINSLQIDLTEGRXX 326
H WK+IRDRE+GKL A FAN IK +R+SQLQLSNHKD+VSPHKGAINSLQID TEGR
Sbjct: 8 HVWKRIRDREAGKLHASHFANRIKWNRISQLQLSNHKDIVSPHKGAINSLQIDSTEGRYL 67
Query: 327 XXXXXXXXXXXXXXQRPSEYEGGGVISKHRCIFVVDKQHQLAHKYAVSTAIWYPIDTGLF 506
QRP+ YE GGVISKH IFVVDKQHQ AHKYAVS+AIWYPIDTGLF
Sbjct: 68 LSAASDASVAVYDVQRPTVYEAGGVISKHSSIFVVDKQHQQAHKYAVSSAIWYPIDTGLF 127
Query: 507 ITGSYDHHINVWDTNTTQVVVNFKMPGKVYRTAMSTLSSSHTLIAAGTEDVQVRLCDITS 686
+TGSYDHHINVWDTNTTQVVVNFKMPGKV+R AMS LS+SH LIAA TEDVQVRLCDI S
Sbjct: 128 VTGSYDHHINVWDTNTTQVVVNFKMPGKVHRAAMSNLSTSHMLIAAATEDVQVRLCDIAS 187
Query: 687 GAFSHTLSGHRDGVMTVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFLVLNQSETQLGRR 866
GAF+HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCF VL+QS TQLGRR
Sbjct: 188 GAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSRTQLGRR 247
Query: 867 PPILKRSMLTK-------------------ESSTKLSATQKKLANGSGSRQLPIGGVPSK 989
P IL SM+TK +SSTKLSA QKK ANGSGSRQ IG VPSK
Sbjct: 248 PTILNHSMITKVFFFIFXFSISADTFIGSQDSSTKLSAAQKKHANGSGSRQQLIGRVPSK 307
Query: 990 GPMKQRLHPGMLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCDTLVN 1169
GPMKQ+LHPGMLSTQDRATAHYGAVTGLK TEDGMYLLSAGSDSRLRLWD+ESGCDTLVN
Sbjct: 308 GPMKQKLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESGCDTLVN 367
Query: 1170 FETVRLQTNKPIQLATTQDSTLVFVPCMRVVKAFDMWSGNAHTILRGHYECVNACWFNQQ 1349
FETVRLQ NKP+QLATTQDSTLVFVPCMR VKAFDMWSGN +TILRGHYECVN+CWFNQQ
Sbjct: 368 FETVRLQVNKPLQLATTQDSTLVFVPCMRSVKAFDMWSGNTYTILRGHYECVNSCWFNQQ 427
Query: 1350 DQELYTGGNDRQILVCSPARSFXXXXXXXXXXXXXNWSS 1466
DQELYTGGNDRQILV SPARS NWSS
Sbjct: 428 DQELYTGGNDRQILVWSPARSMADEMDEGPAEDQDNWSS 466
>ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-8-like [Glycine max]
Length = 460
Score = 715 bits (1846), Expect = 0.0
Identities = 359/454 (79%), Positives = 379/454 (83%), Gaps = 14/454 (3%)
Frame = +3
Query: 147 HTWKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSPHKGAINSLQIDLTEGRXX 326
H WK+IRDRE+GKLRA FAN IKS+R+SQLQLSNHKD+VSPHKGAINSLQ+D TEGR
Sbjct: 8 HVWKRIRDREAGKLRANHFANRIKSNRISQLQLSNHKDIVSPHKGAINSLQVDSTEGRYL 67
Query: 327 XXXXXXXXXXXXXXQRPSEYE----GGGVISKHRCIFVVDKQHQLAHKYAVSTAIWYPID 494
QRP+ YE GGG ISKH IFVVDKQHQ HKYAVSTAIWYPID
Sbjct: 68 LSAASDASVAVYDVQRPTVYEAGGGGGGGISKHSSIFVVDKQHQQGHKYAVSTAIWYPID 127
Query: 495 TGLFITGSYDHHINVWDTNTTQVVVNFKMPGKVYRTAMSTLSSSHTLIAAGTEDVQVRLC 674
TGLF+TGSYDHHINVWDTNTTQVVVNFKMPGKV+R AMS LS+SH LIAA TEDVQVRLC
Sbjct: 128 TGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRAAMSNLSTSHMLIAAATEDVQVRLC 187
Query: 675 DITSGAFSHTLSGHRDGVMTVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFLVLNQSETQ 854
DI SGAF+HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCF VL+QS+TQ
Sbjct: 188 DIASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSQTQ 247
Query: 855 LGRRPPILKRSMLTK----------ESSTKLSATQKKLANGSGSRQLPIGGVPSKGPMKQ 1004
LGRRPPILKRSM+TK +SSTKL A QKK ANGSGSRQ PIG VPSKGPMKQ
Sbjct: 248 LGRRPPILKRSMITKVKSQSLYHSQDSSTKLRAAQKKHANGSGSRQQPIGRVPSKGPMKQ 307
Query: 1005 RLHPGMLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCDTLVNFETVR 1184
RLHPGMLSTQDRATAHYGAVTGLK TEDGMYLLSAGSDSRLRLWD+ES C+TLVNFETVR
Sbjct: 308 RLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESSCNTLVNFETVR 367
Query: 1185 LQTNKPIQLATTQDSTLVFVPCMRVVKAFDMWSGNAHTILRGHYECVNACWFNQQDQELY 1364
LQ NKP+QLATTQDS LVFVPCMR VKAFDMWSGN +TILRGHYECVN+CWFNQ DQELY
Sbjct: 368 LQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTILRGHYECVNSCWFNQHDQELY 427
Query: 1365 TGGNDRQILVCSPARSFXXXXXXXXXXXXXNWSS 1466
TGGNDRQILV SPARS NWSS
Sbjct: 428 TGGNDRQILVWSPARSI-ADEMEGTAEDQDNWSS 460
>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
[Ricinus communis]
Length = 479
Score = 649 bits (1673), Expect = 0.0
Identities = 313/439 (71%), Positives = 360/439 (82%), Gaps = 10/439 (2%)
Frame = +3
Query: 123 EIKDAQNMHTWKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSPHKGAINSLQI 302
E KDA M W++IRDRESGK R SF N +KS+R++ LQLSN+K++VSPH+GAINSLQ+
Sbjct: 26 EAKDASKM--WREIRDRESGKTRPNSFTNRVKSNRIANLQLSNYKEIVSPHRGAINSLQV 83
Query: 303 DLTEGRXXXXXXXXXXXXXXXXQRPSEYEGGGVISKHRCIFVVDKQHQLAHKYAVSTAIW 482
DLTEGR QR +++E GVI+KH+C+F+VDKQH+ AHKYAVS+A W
Sbjct: 84 DLTEGRYLISGASDASAAVFDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKYAVSSATW 143
Query: 483 YPIDTGLFITGSYDHHINVWDTNTTQVVVNFKMPGKVYRTAMSTLSSSHTLIAAGTEDVQ 662
YP+DTGLF+TGSYDH+I VWDTNTTQVVVNFK+PGKVYRTAMS L++SH LIAAGTEDVQ
Sbjct: 144 YPVDTGLFVTGSYDHYIKVWDTNTTQVVVNFKLPGKVYRTAMSPLATSHMLIAAGTEDVQ 203
Query: 663 VRLCDITSGAFSHTLSGHRDGVMTVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFLVLNQ 842
VRLCDI SGAF+HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCF VL+Q
Sbjct: 204 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQ 263
Query: 843 SETQLGRRPPILKRSMLTKESSTKLSATQ----------KKLANGSGSRQLPIGGVPSKG 992
S++QLGRRPP+L RS+ K SS L A Q KK A G+G +Q P+G P KG
Sbjct: 264 SQSQLGRRPPVLPRSVANKVSSRSLLAGQHLSSKSRAPLKKSATGNGKKQSPLGRTPVKG 323
Query: 993 PMKQRLHPGMLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCDTLVNF 1172
P++QRLHPGMLS QDRATAHYGAVTGLK+TEDGMYLLSAGSDSR+RLWD+ESGC+TLVNF
Sbjct: 324 PVRQRLHPGMLSIQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDLESGCNTLVNF 383
Query: 1173 ETVRLQTNKPIQLATTQDSTLVFVPCMRVVKAFDMWSGNAHTILRGHYECVNACWFNQQD 1352
ETVRLQT+K IQLATTQDS+LVFVPCM VKAFD+WSG RGHYE VN CW++ QD
Sbjct: 384 ETVRLQTSKAIQLATTQDSSLVFVPCMTAVKAFDLWSGMTSMTFRGHYEYVNCCWYSSQD 443
Query: 1353 QELYTGGNDRQILVCSPAR 1409
QE+YTGGNDRQILV P R
Sbjct: 444 QEIYTGGNDRQILVWCPPR 462
>ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|222860803|gb|EEE98345.1|
predicted protein [Populus trichocarpa]
Length = 449
Score = 625 bits (1613), Expect = e-177
Identities = 301/430 (70%), Positives = 351/430 (81%), Gaps = 11/430 (2%)
Frame = +3
Query: 153 WKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSPHKGAINSLQIDLTEGRXXXX 332
W++IRDRE+GK R SF N + SSR+S LQLSN+KDVVSPH+G+INSLQ+DLTEGR
Sbjct: 2 WREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLLS 61
Query: 333 XXXXXXXXXXXXQRPSEYEGGG---VISKHRCIFVVDKQHQLAHKYAVSTAIWYPIDTGL 503
Q +++EGGG +I+KH+ + +DKQHQ HK+A+S+AIWYPIDTGL
Sbjct: 62 GASDASASVFDIQHATDFEGGGEGALIAKHKSLITIDKQHQNGHKFAISSAIWYPIDTGL 121
Query: 504 FITGSYDHHINVWDTNTTQVVVNFKMPGKVYRTAMSTLSSSHTLIAAGTEDVQVRLCDIT 683
F+TGSYDH+I VWDTN+TQ+V+NFK+PGKVYRTAMS L++SH LIAAGTEDVQVRLCDI
Sbjct: 122 FVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIA 181
Query: 684 SGAFSHTLSGHRDGVMTVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFLVLNQSETQLGR 863
SGAF+HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCFLVL+QS++QLGR
Sbjct: 182 SGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGR 241
Query: 864 RPPILKRSMLTKESST--------KLSATQKKLANGSGSRQLPIGGVPSKGPMKQRLHPG 1019
RPP+L RS ++ + K QKK G+G + P+G VP+KG +KQRLHPG
Sbjct: 242 RPPVLARSAVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQRLHPG 301
Query: 1020 MLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCDTLVNFETVRLQTNK 1199
MLS+QDRATAHYGAVTGLK+TEDGMYLLSAGSDSR+RLWD+ESG +TLVNFET RLQT+K
Sbjct: 302 MLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQTSK 361
Query: 1200 PIQLATTQDSTLVFVPCMRVVKAFDMWSGNAHTILRGHYECVNACWFNQQDQELYTGGND 1379
PIQLAT QDS LVFVPCM VKAFD+WSG + RGHYE VN CWF+ QDQELYTGGND
Sbjct: 362 PIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQELYTGGND 421
Query: 1380 RQILVCSPAR 1409
RQILV SPAR
Sbjct: 422 RQILVWSPAR 431
>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
repair protein ERCC-8-like [Cucumis sativus]
Length = 446
Score = 620 bits (1600), Expect = e-175
Identities = 299/430 (69%), Positives = 350/430 (81%), Gaps = 10/430 (2%)
Frame = +3
Query: 153 WKQIRDRESGKLRAGSFANCIKSSRVSQLQLSNHKDVVSPHKGAINSLQIDLTEGRXXXX 332
WK IRDRE+GKLR SFAN +KS R S LQLSNHKD+VSPH+G++NSLQ+DLTEGR
Sbjct: 2 WKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLS 61
Query: 333 XXXXXXXXXXXXQRPSEYEGGGVISKHRCIFVVDKQHQLAHKYAVSTAIWYPIDTGLFIT 512
QR + EG +I+KH+CIF VDKQH+ HKYA+S+AIWYP+DTGLF+T
Sbjct: 62 GASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVT 119
Query: 513 GSYDHHINVWDTNTTQVVVNFKMPGKVYRTAMSTLSSSHTLIAAGTEDVQVRLCDITSGA 692
GS+DHHINVWDTNTTQVVVNFK+PGKVYRTAMS+L++SH LIAAGTEDVQVRLCDI+SGA
Sbjct: 120 GSFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGA 179
Query: 693 FSHTLSGHRDGVMTVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFLVLNQSETQLGRRPP 872
FSHTLSGHRDGVM+VEWSASSEWVL+TGGCDGAIRFWDIRRAGCF VL+QS++QLGRRPP
Sbjct: 180 FSHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPP 239
Query: 873 I---------LKRSMLTKE-SSTKLSATQKKLANGSGSRQLPIGGVPSKGPMKQRLHPGM 1022
I +S+L + S+ K KKL NG+ ++ G +P+KG +QRLHPG+
Sbjct: 240 ISGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPGL 299
Query: 1023 LSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCDTLVNFETVRLQTNKP 1202
LS QDRA +HYGAVTGLKVT DGMYLLSAGSDSRL+LWD+ESGC+TLVNFET+RLQTNKP
Sbjct: 300 LSGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKP 359
Query: 1203 IQLATTQDSTLVFVPCMRVVKAFDMWSGNAHTILRGHYECVNACWFNQQDQELYTGGNDR 1382
+QLAT+QDS+LVF PCM VKAFDMW+G GHYE VN CW+N DQELYTGGNDR
Sbjct: 360 LQLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDR 419
Query: 1383 QILVCSPARS 1412
QILV SP+++
Sbjct: 420 QILVWSPSQN 429