BLASTX nr result

ID: Glycyrrhiza23_contig00009375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009375
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|2...   171   5e-41
ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|2...   171   5e-41
ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261...   171   9e-41
ref|XP_004152108.1| PREDICTED: uncharacterized protein LOC101213...   169   3e-40
gb|AFK42919.1| unknown [Lotus japonicus]                              167   8e-40

>ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|222852719|gb|EEE90266.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  171 bits (434), Expect = 5e-41
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 6/125 (4%)
 Frame = +3

Query: 3   EGYVE------EEDLARTKSLTDDDLDELKGCLDLGFGFSYDDIPELCNTLPALELCYSM 164
           EGYVE      E++L RTKSLTDDDLDELKGCLDLGFGFSYD+IPELCNTLPALELCYSM
Sbjct: 77  EGYVEGSSSGSEDELKRTKSLTDDDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSM 136

Query: 165 SQKFIDNXXXXXXXXXXXXXXXXXXXXXXXIANWRISSPGDHPEDVKARLKFWAQAVACT 344
           SQKF+D                        IANW+ISSPGDHPEDVKARLK+WAQAVACT
Sbjct: 137 SQKFLDE---HQKSPEGSSPAVAEAANSSPIANWKISSPGDHPEDVKARLKYWAQAVACT 193

Query: 345 VKLCS 359
           V+LCS
Sbjct: 194 VRLCS 198


>ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|222837368|gb|EEE75747.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  171 bits (434), Expect = 5e-41
 Identities = 87/124 (70%), Positives = 93/124 (75%), Gaps = 5/124 (4%)
 Frame = +3

Query: 3   EGYVE-----EEDLARTKSLTDDDLDELKGCLDLGFGFSYDDIPELCNTLPALELCYSMS 167
           EGYVE     E++L RTKSLTDDDLDELKGCLDLGFGFSYD+IPELCNTLPALELCYSMS
Sbjct: 29  EGYVEGRSNSEDELKRTKSLTDDDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMS 88

Query: 168 QKFIDNXXXXXXXXXXXXXXXXXXXXXXXIANWRISSPGDHPEDVKARLKFWAQAVACTV 347
           QKF+D                        IANW+ISSPGDHPEDVKARLKFWAQ VACTV
Sbjct: 89  QKFLDE-HQKPPESSSPAEAEAEAASSSPIANWKISSPGDHPEDVKARLKFWAQTVACTV 147

Query: 348 KLCS 359
           +LCS
Sbjct: 148 RLCS 151


>ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261066 isoform 1 [Vitis
           vinifera] gi|359478114|ref|XP_003632071.1| PREDICTED:
           uncharacterized protein LOC100261066 isoform 2 [Vitis
           vinifera]
          Length = 185

 Score =  171 bits (432), Expect = 9e-41
 Identities = 86/122 (70%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
 Frame = +3

Query: 3   EGYVE---EEDLARTKSLTDDDLDELKGCLDLGFGFSYDDIPELCNTLPALELCYSMSQK 173
           EGYVE   E+DL RTKSLTD+DLDELKGCLDLGFGFSY++IPELCNTLPALELCYSMSQK
Sbjct: 70  EGYVETADEDDLMRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLPALELCYSMSQK 129

Query: 174 FIDNXXXXXXXXXXXXXXXXXXXXXXXIANWRISSPGDHPEDVKARLKFWAQAVACTVKL 353
           F+D+                       IANW+ISSPGDHPE+VKARLKFWAQAVACTV+L
Sbjct: 130 FMDD------QQKAPESSPAASESPGPIANWKISSPGDHPEEVKARLKFWAQAVACTVRL 183

Query: 354 CS 359
           CS
Sbjct: 184 CS 185


>ref|XP_004152108.1| PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus]
           gi|449484637|ref|XP_004156937.1| PREDICTED:
           uncharacterized LOC101213317 [Cucumis sativus]
          Length = 183

 Score =  169 bits (428), Expect = 3e-40
 Identities = 84/121 (69%), Positives = 95/121 (78%), Gaps = 2/121 (1%)
 Frame = +3

Query: 3   EGYVEEED-LARTKSLTDDDLDELKGCLDLGFGFSYDDIPELCNTLPALELCYSMSQKFI 179
           EG+VE+ED L RTKSLTD+DLDELKGC+DLGFGFSYD+IPELCNTLPALELCYSMSQK++
Sbjct: 63  EGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYM 122

Query: 180 -DNXXXXXXXXXXXXXXXXXXXXXXXIANWRISSPGDHPEDVKARLKFWAQAVACTVKLC 356
            D+                       IANW+ISSPGDHPEDVKARLKFWAQAVACTV+LC
Sbjct: 123 DDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRLC 182

Query: 357 S 359
           +
Sbjct: 183 N 183


>gb|AFK42919.1| unknown [Lotus japonicus]
          Length = 129

 Score =  167 bits (424), Expect = 8e-40
 Identities = 85/119 (71%), Positives = 90/119 (75%)
 Frame = +3

Query: 3   EGYVEEEDLARTKSLTDDDLDELKGCLDLGFGFSYDDIPELCNTLPALELCYSMSQKFID 182
           EGYVEE DLAR+KSLTDDDL+ELKGC+DLGFGFSYD+IPEL NTLPALELCYSMS KF  
Sbjct: 22  EGYVEEADLARSKSLTDDDLEELKGCVDLGFGFSYDEIPELRNTLPALELCYSMSHKF-- 79

Query: 183 NXXXXXXXXXXXXXXXXXXXXXXXIANWRISSPGDHPEDVKARLKFWAQAVACTVKLCS 359
                                   IANW+ISSPGDHPEDVKARLKFWAQAVACTVKLCS
Sbjct: 80  ---------SSAADSSSDPPPADSIANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 129


Top