BLASTX nr result

ID: Glycyrrhiza23_contig00009349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009349
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531499.1| PREDICTED: uncharacterized protein LOC100804...   211   1e-52
ref|XP_003546787.1| PREDICTED: uncharacterized protein LOC100783...   208   8e-52
ref|XP_003596202.1| RNA-binding protein with serine-rich domain-...   203   3e-50
ref|XP_002513413.1| ribonucleic acid binding protein S1, putativ...   202   5e-50
ref|XP_002317618.1| predicted protein [Populus trichocarpa] gi|2...   198   9e-49

>ref|XP_003531499.1| PREDICTED: uncharacterized protein LOC100804778 [Glycine max]
          Length = 422

 Score =  211 bits (537), Expect = 1e-52
 Identities = 107/143 (74%), Positives = 113/143 (79%)
 Frame = +3

Query: 216 AEPARRGRSPPPQAXXXXXXXXXXXXVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSV 395
           A+ ARRGRSPPPQ+            VRESLVLHVEKLSRNVNEGHLKEIFSNFGEV+SV
Sbjct: 74  ADAARRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVISV 133

Query: 396 ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVVKARFTLPPRQXXXXXXXX 575
           ELAMDRTVNLPKGYGYVQFKTRG+AEKALLYMDGAQIDGNV+KARFTLPPRQ        
Sbjct: 134 ELAMDRTVNLPKGYGYVQFKTRGEAEKALLYMDGAQIDGNVIKARFTLPPRQKVSPPPKT 193

Query: 576 XXXXXXREAPRTDNAGVDVEKDG 644
                 RE PRTDNA  DV+KDG
Sbjct: 194 SAVAPKREIPRTDNASADVDKDG 216


>ref|XP_003546787.1| PREDICTED: uncharacterized protein LOC100783566 [Glycine max]
          Length = 422

 Score =  208 bits (530), Expect = 8e-52
 Identities = 105/143 (73%), Positives = 111/143 (77%)
 Frame = +3

Query: 216 AEPARRGRSPPPQAXXXXXXXXXXXXVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSV 395
           A+  RRGRSPPPQ+            VRESLVLHVEKLSRNVNEGHLKEIFSNFGEV+SV
Sbjct: 74  ADATRRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVISV 133

Query: 396 ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVVKARFTLPPRQXXXXXXXX 575
           ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNV+KARFTLPPRQ        
Sbjct: 134 ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVIKARFTLPPRQKVSPPPKA 193

Query: 576 XXXXXXREAPRTDNAGVDVEKDG 644
                 R+ PR DNA  DV+KDG
Sbjct: 194 SAVAPKRDTPRADNASADVDKDG 216


>ref|XP_003596202.1| RNA-binding protein with serine-rich domain-containing protein
           [Medicago truncatula] gi|355485250|gb|AES66453.1|
           RNA-binding protein with serine-rich domain-containing
           protein [Medicago truncatula]
          Length = 415

 Score =  203 bits (517), Expect = 3e-50
 Identities = 109/147 (74%), Positives = 113/147 (76%), Gaps = 4/147 (2%)
 Frame = +3

Query: 216 AEPARRGRSPP----PQAXXXXXXXXXXXXVRESLVLHVEKLSRNVNEGHLKEIFSNFGE 383
           AEPARRGRSPP    PQ+            VRESLVLHVEKLSRNVNEGHLKEIFSNFGE
Sbjct: 66  AEPARRGRSPPLPPPPQSKRPSPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGE 125

Query: 384 VVSVELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVVKARFTLPPRQXXXX 563
           VVSVEL MDR VNLPKGYGYV FKTRG+AEKALLYMDGAQIDGNVVKARFTLPPRQ    
Sbjct: 126 VVSVELVMDRAVNLPKGYGYVHFKTRGEAEKALLYMDGAQIDGNVVKARFTLPPRQ--KA 183

Query: 564 XXXXXXXXXXREAPRTDNAGVDVEKDG 644
                     R+APRTDNAG +VEKDG
Sbjct: 184 SPPPKAVAPKRDAPRTDNAGAEVEKDG 210


>ref|XP_002513413.1| ribonucleic acid binding protein S1, putative [Ricinus communis]
           gi|223547321|gb|EEF48816.1| ribonucleic acid binding
           protein S1, putative [Ricinus communis]
          Length = 423

 Score =  202 bits (515), Expect = 5e-50
 Identities = 101/143 (70%), Positives = 111/143 (77%)
 Frame = +3

Query: 216 AEPARRGRSPPPQAXXXXXXXXXXXXVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSV 395
           AE ARRGRSPPPQ+             RESLVLH++ LSRNVNEGHLKEIFSNFGE++ V
Sbjct: 80  AEVARRGRSPPPQSRKASPPPRKASPTRESLVLHIDSLSRNVNEGHLKEIFSNFGEIIHV 139

Query: 396 ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVVKARFTLPPRQXXXXXXXX 575
           ELAMDR+VNLPKGYGYV+FKTR DAEKALLYMDGAQIDGNVV+ARFTLPPRQ        
Sbjct: 140 ELAMDRSVNLPKGYGYVEFKTRTDAEKALLYMDGAQIDGNVVRARFTLPPRQKVSPPPKP 199

Query: 576 XXXXXXREAPRTDNAGVDVEKDG 644
                 R+AP+TDNAG DVEKDG
Sbjct: 200 IAAAPKRDAPKTDNAGADVEKDG 222


>ref|XP_002317618.1| predicted protein [Populus trichocarpa] gi|222860683|gb|EEE98230.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  198 bits (504), Expect = 9e-49
 Identities = 99/143 (69%), Positives = 110/143 (76%)
 Frame = +3

Query: 216 AEPARRGRSPPPQAXXXXXXXXXXXXVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSV 395
           AE ARRGRSPPPQ+            +RESLVLHV+ L+RNVNEGHL+EIFSNFGEVV V
Sbjct: 76  AEGARRGRSPPPQSKKVSPPPRKASPIRESLVLHVDSLTRNVNEGHLREIFSNFGEVVHV 135

Query: 396 ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQIDGNVVKARFTLPPRQXXXXXXXX 575
           ELAMDRTVNLPKG+GYV+FKTR DAEKALLYMDGAQIDGNVV+A+FTLPPRQ        
Sbjct: 136 ELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNVVRAKFTLPPRQKLSPPPKP 195

Query: 576 XXXXXXREAPRTDNAGVDVEKDG 644
                 R+AP+TDNA  D EKDG
Sbjct: 196 IAAAPKRDAPKTDNASADAEKDG 218


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