BLASTX nr result

ID: Glycyrrhiza23_contig00009348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009348
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520597.1| PREDICTED: RING-H2 finger protein ATL1-like ...   383   e-104
ref|XP_002532367.1| ring finger protein, putative [Ricinus commu...   381   e-103
ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ...   350   5e-94
gb|ACU18217.1| unknown [Glycine max]                                  344   3e-92

>ref|XP_003520597.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 335

 Score =  383 bits (984), Expect = e-104
 Identities = 213/368 (57%), Positives = 252/368 (68%), Gaps = 17/368 (4%)
 Frame = +2

Query: 44   MALNYKNSQFYKLGYQALPPIIAQASTL-HHPPQPVSDYAFPIFAIVVVSILATVLLLLS 220
            MALNY  S  Y L +QA       A+T+ +H  QP SD   PI AI+V SI  T  +L++
Sbjct: 1    MALNYNPS--YNLVHQA-----PHANTIIYHTTQPASD--LPILAIIVPSIFVTAFILIT 51

Query: 221  YFTFLTKCCSNWHQFNPLRWISILRARHDE-----DPFIALS--PSTWNRGLDESVIREI 379
            Y T +TKCCSNWHQ NPLRWIS L+A   E     DPFIALS  P  WN GLDES I+EI
Sbjct: 52   YLTLVTKCCSNWHQLNPLRWISTLQASQHEHQDHQDPFIALSLSPMMWNHGLDESAIKEI 111

Query: 380  PTFQFIRGEGGGD-QSVYGCVVCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQSNANCPL 556
            PT +  + E   + QSV GCVVCLTEFQE D+LKVLPNC+HAFHL CIDIWLQ+NANCPL
Sbjct: 112  PTLECTKAEAEKNIQSVCGCVVCLTEFQEHDMLKVLPNCSHAFHLHCIDIWLQTNANCPL 171

Query: 557  CRSSISGNTHSAFDHIIAXXXXXXXXXXXXTNMGSDEDFVVIELGGEHGGLLP---QQER 727
            CRSSI+          +             + MGSDEDFVVIELGG+H   LP   Q+ER
Sbjct: 172  CRSSITS---------VIAPSSSPQDSQLLSYMGSDEDFVVIELGGQHVATLPQMMQRER 222

Query: 728  NDSRGS----LAQSRNHYTTRKVEQQKQLGHLKPRKCHHVSIIGDECIDIRKKDDQFSIQ 895
            +D+R      +  SR+H T               RKCHHVSI+GDECID+RKKD+QFSIQ
Sbjct: 223  SDTRERNQRIVGYSRSHST---------------RKCHHVSIMGDECIDVRKKDEQFSIQ 267

Query: 896  PLRRSFSMDSANDRQVYLDVRTIIQQ-NRHQNEASASEDCNSRSKRAFFPFCYGKGSKNA 1072
            P+RRSFSMDSAND+Q+YLD +T+IQQ NRHQN+ASASEDCNSRS+R+FFPF Y +GSK  
Sbjct: 268  PIRRSFSMDSANDKQLYLDFQTMIQQNNRHQNQASASEDCNSRSRRSFFPFRYARGSKTL 327

Query: 1073 VLPLENDV 1096
            V+PLEN V
Sbjct: 328  VVPLENKV 335


>ref|XP_002532367.1| ring finger protein, putative [Ricinus communis]
            gi|223527923|gb|EEF30010.1| ring finger protein, putative
            [Ricinus communis]
          Length = 345

 Score =  381 bits (979), Expect = e-103
 Identities = 197/346 (56%), Positives = 244/346 (70%), Gaps = 4/346 (1%)
 Frame = +2

Query: 59   KNSQFYKLGYQALPPIIAQASTLHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLT 238
            K++++Y L   ALP    Q    +  P P SD+AFPI AI ++SI+AT +LL  Y+ F+ 
Sbjct: 4    KHTKYYNLELHALPFKTQQNPIYNQSPSPTSDHAFPILAIALLSIMATAILLFGYYVFVN 63

Query: 239  KCCSNWHQFNPLRWISILRARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGGGD 418
            KCC NW Q N LRW+S    R +ED FIALSP+ WNRGLDESVIR IP FQ+ RGE    
Sbjct: 64   KCCFNWQQVNLLRWVSTWLVRRNEDSFIALSPTMWNRGLDESVIRGIPAFQYRRGEAQ-Q 122

Query: 419  QSVYGCVVCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQSNANCPLCRSSISGNTHSAFD 598
            +S+YGCVVCL EFQE+D+L+VLPNCNH+FHLDCIDIWLQSNANCPLCR+ ISG T    D
Sbjct: 123  RSIYGCVVCLNEFQEEDMLRVLPNCNHSFHLDCIDIWLQSNANCPLCRTGISGITRYPID 182

Query: 599  HIIAXXXXXXXXXXXXTN-MGSDEDFVVIELGGEHGGLL---PQQERNDSRGSLAQSRNH 766
             IIA             + MG DEDFVVIELGGE  G+L    QQER+ SR +  Q R+ 
Sbjct: 183  QIIAPSSSPQGSQPYTDSLMGGDEDFVVIELGGEEEGILLPHRQQERDASRETQMQLRSQ 242

Query: 767  YTTRKVEQQKQLGHLKPRKCHHVSIIGDECIDIRKKDDQFSIQPLRRSFSMDSANDRQVY 946
             +  K+EQ+   G LKPRK HH+SI+GDECID+R+KDDQFSIQP+RRSFS+DSA DRQ+Y
Sbjct: 243  -SPAKMEQKP--GKLKPRKRHHLSIMGDECIDVREKDDQFSIQPIRRSFSLDSAVDRQLY 299

Query: 947  LDVRTIIQQNRHQNEASASEDCNSRSKRAFFPFCYGKGSKNAVLPL 1084
            L V+ IIQQN HQ     SE+ ++R + +FF F +  GS+ A LP+
Sbjct: 300  LSVQNIIQQNTHQRGIYTSEESSNRVQTSFFHFGHSVGSRKAFLPI 345


>ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|222842507|gb|EEE80054.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  377 bits (968), Expect = e-102
 Identities = 198/333 (59%), Positives = 244/333 (73%), Gaps = 5/333 (1%)
 Frame = +2

Query: 113  QASTLHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLTKCCSNWHQFNPLRWISIL 292
            Q + ++  P P SD+AFP+ AI V+SI+ T  LL+ Y+ F+ KCCSNW+QFN LRW ++ 
Sbjct: 16   QQNLIYQQPSPTSDHAFPLLAIAVLSIMGTAFLLVGYYVFVNKCCSNWNQFNLLRWFTVW 75

Query: 293  RARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGGGDQSVYGCVVCLTEFQEQDV 472
            RAR +ED FIALSP+ WNRGLDESVIREIPTFQ+ R E G ++S  GCVVCL EFQEQD+
Sbjct: 76   RARRNEDSFIALSPTMWNRGLDESVIREIPTFQY-RREEGRERSSCGCVVCLNEFQEQDM 134

Query: 473  LKVLPNCNHAFHLDCIDIWLQSNANCPLCRSSISGN-THSAFDHIIAXXXXXXXXXXXXT 649
            L+VLPNC+HAFHLDCIDIW QSNANCPLCR+SISG+ T    D IIA             
Sbjct: 135  LRVLPNCSHAFHLDCIDIWFQSNANCPLCRTSISGSGTKYPVDRIIAPSSSPQGSQPYTD 194

Query: 650  N-MGSDEDFVVIELGGEH-GGLLP--QQERNDSRGSLAQSRNHYTTRKVEQQKQLGHLKP 817
            + MGSDED+VVIELGGE  G LLP  Q ERN SR    + R+  +  K+EQ+  LG LK 
Sbjct: 195  SLMGSDEDYVVIELGGEDDGALLPPRQHERNTSREVQMRLRSR-SPMKMEQK--LGKLKT 251

Query: 818  RKCHHVSIIGDECIDIRKKDDQFSIQPLRRSFSMDSANDRQVYLDVRTIIQQNRHQNEAS 997
            RK HHVSI+GDECID+R KDDQFSIQPLRRSFS+DSA DRQ+Y  V+ II QN H  E S
Sbjct: 252  RKQHHVSIMGDECIDVRGKDDQFSIQPLRRSFSLDSAVDRQLYSSVQAIIHQNIHHREIS 311

Query: 998  ASEDCNSRSKRAFFPFCYGKGSKNAVLPLENDV 1096
             +E+ ++R  R+ FPF + +GS+ AV P+E ++
Sbjct: 312  NTEESSNRVLRSVFPFVHVRGSRKAVRPVEFEI 344


>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
          Length = 351

 Score =  350 bits (898), Expect = 5e-94
 Identities = 189/345 (54%), Positives = 239/345 (69%), Gaps = 6/345 (1%)
 Frame = +2

Query: 71   FYKLGYQALPPIIAQASTLHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLTKCCS 250
            F   G +AL  I    + ++ P  P SD AFPI AI V+SI+AT  LL+SY+ F+ KCC 
Sbjct: 8    FSNHGSEALVYIKTHENPIYQPSSPASDTAFPILAIAVLSIMATAFLLVSYYIFVIKCCL 67

Query: 251  NWHQFNPLRWISILRARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGGGDQSVY 430
            +WH    LR  S  ++R  EDP +  SP+  NRGLDES+I +IPTF F RG+   + S +
Sbjct: 68   SWHHIELLRRFSTSQSRQQEDPLMDYSPTFLNRGLDESLIHQIPTFLFRRGQSE-EGSFH 126

Query: 431  GCVVCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQSNANCPLCRSSISGNTHSAFDHIIA 610
            GCVVCL EFQE D+++VLPNC+HAFHLDCIDIWLQSNANCPLCRSSISG T    D IIA
Sbjct: 127  GCVVCLNEFQEHDMIRVLPNCSHAFHLDCIDIWLQSNANCPLCRSSISGTTRYRNDPIIA 186

Query: 611  -XXXXXXXXXXXXTNMGSDEDFVVIELGG--EHGGLLP--QQERNDSRGSLAQSRNHYTT 775
                           MG D+DFVVIELGG  + G +LP  QQER DSR  L QSR    T
Sbjct: 187  PSSSPQDPRPFSEALMGGDDDFVVIELGGGDDRGVILPPRQQERADSRELLVQSRGPSPT 246

Query: 776  RKVEQQKQLGHLKPRKCHHVSIIGDECIDIRKKDDQFSIQPLRRSFSMDSANDRQVYLDV 955
            +    Q++L + K RK H+VS +GDECID+R+KDDQF IQP+RRSFSMDSA D Q+Y+ V
Sbjct: 247  K---LQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLYMTV 303

Query: 956  RTIIQ-QNRHQNEASASEDCNSRSKRAFFPFCYGKGSKNAVLPLE 1087
            + II+ +NR  +E S S++C+SR +R+FF F +G+GS+NAVLP+E
Sbjct: 304  QEIIRNKNRPLSEVSTSQECDSRVRRSFFSFGHGRGSRNAVLPIE 348


>gb|ACU18217.1| unknown [Glycine max]
          Length = 264

 Score =  344 bits (882), Expect = 3e-92
 Identities = 175/247 (70%), Positives = 189/247 (76%), Gaps = 4/247 (1%)
 Frame = +2

Query: 44  MALNYKNSQFYKLGYQALPPIIAQASTLHHPPQPVS-DYAFPIFAIVVVSILATVLLLLS 220
           MAL   +S   KLGY+A PPI  QA TL HPPQP S DYAFPI  IVV+SILATVLLLLS
Sbjct: 1   MALRKNHSYNNKLGYEAFPPIKTQAGTLQHPPQPASSDYAFPILVIVVLSILATVLLLLS 60

Query: 221 YFTFLTKCCSNWHQFNPLRWISILRARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIR 400
           YFTFLTK CSNW Q NP+RWISILRARHDEDPFIA SP+ WNRGLD+S+IREIPTF+FI+
Sbjct: 61  YFTFLTKYCSNWRQVNPMRWISILRARHDEDPFIAFSPTMWNRGLDDSIIREIPTFKFIK 120

Query: 401 GEGGGDQSVYGCVVCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQSNANCPLCRSSISGN 580
            EG      YGCVVCLTEF+E DVLKVLPNCNHAFHLDCIDIWLQ+N+NCPLCRS ISG 
Sbjct: 121 EEGEDQSVYYGCVVCLTEFKEHDVLKVLPNCNHAFHLDCIDIWLQTNSNCPLCRSGISGT 180

Query: 581 THSAFDHIIAXXXXXXXXXXXXTNMGSDEDFVVIELGGEHGGLLPQ---QERNDSRGSLA 751
           TH   DHIIA            +NMGSDEDFVVIELGGEHG  LPQ   +     RGSLA
Sbjct: 181 THCPLDHIIA-PSSSPQDSQLLSNMGSDEDFVVIELGGEHGAALPQCNNKRGMTQRGSLA 239

Query: 752 QSRNHYT 772
             RNH T
Sbjct: 240 H-RNHST 245


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