BLASTX nr result

ID: Glycyrrhiza23_contig00009268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009268
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]     105   5e-21
ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatu...   105   5e-21
ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [G...    89   5e-16
ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [G...    69   5e-10
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...    59   3e-07

>gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 689

 Score =  105 bits (261), Expect = 5e-21
 Identities = 58/93 (62%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
 Frame = +1

Query: 1   GESLVNPSAVGLNPSGTAGHAENAEPASAPSLKDPIP-----MPNVNSQAMQNTNGCSNT 165
           GE ++N SAV LN SGTAG  E  E ASA  LKD +P     MPNVNSQ M N  GCS+T
Sbjct: 585 GEPVMNSSAVELNASGTAGLMETVESASASKLKDQMPKLKDPMPNVNSQVMLNNKGCSST 644

Query: 166 TNQMPTQCEATTGGFEQSTLVLDSGHASLPNDR 264
            NQM  QCEATTGG EQS +VLDS HA L ND+
Sbjct: 645 -NQMSIQCEATTGGLEQSNVVLDSAHALLENDK 676


>ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
           gi|355501144|gb|AES82347.1| Transcription factor PIF3
           [Medicago truncatula]
          Length = 682

 Score =  105 bits (261), Expect = 5e-21
 Identities = 58/93 (62%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
 Frame = +1

Query: 1   GESLVNPSAVGLNPSGTAGHAENAEPASAPSLKDPIP-----MPNVNSQAMQNTNGCSNT 165
           GE ++N SAV LN SGTAG  E  E ASA  LKD +P     MPNVNSQ M N  GCS+T
Sbjct: 578 GEPVMNSSAVELNASGTAGLMETVESASASKLKDQMPKLKDPMPNVNSQVMLNNKGCSST 637

Query: 166 TNQMPTQCEATTGGFEQSTLVLDSGHASLPNDR 264
            NQM  QCEATTGG EQS +VLDS HA L ND+
Sbjct: 638 -NQMSIQCEATTGGLEQSNVVLDSAHALLENDK 669


>ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
          Length = 633

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +1

Query: 1   GESLVNPSAVGLNPSGTAGHAENAEPASAPSLKDPIPMPNVNSQAMQNTNGCSNTTNQMP 180
           G  L+N  A GL+  G++G  E  + ASA  LKD   M NV+ Q  Q+T GC ++T+QMP
Sbjct: 540 GGPLMNSPAQGLHARGSSGLVETVDSASASGLKDQ--MQNVDPQVKQSTGGC-DSTSQMP 596

Query: 181 TQCEATTGGFEQSTLVLDSGHASLPNDRGAVNP 279
           TQCEA   GFEQS L    GHAS  ND GAVNP
Sbjct: 597 TQCEAAAVGFEQSALAHSRGHASKANDNGAVNP 629


>ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
          Length = 665

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/56 (58%), Positives = 42/56 (75%)
 Frame = +1

Query: 112 MPNVNSQAMQNTNGCSNTTNQMPTQCEATTGGFEQSTLVLDSGHASLPNDRGAVNP 279
           MPNV+ Q  Q+T G  ++T+QMPTQCEA   GFEQSTL  ++GHA+  ND G+VNP
Sbjct: 607 MPNVDPQVKQSTGG-RDSTSQMPTQCEAAAVGFEQSTLAHNNGHATKANDNGSVNP 661


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
           gi|223548548|gb|EEF50039.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 758

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/95 (37%), Positives = 50/95 (52%)
 Frame = +1

Query: 22  SAVGLNPSGTAGHAENAEPASAPSLKDPIPMPNVNSQAMQNTNGCSNTTNQMPTQCEATT 201
           + +GLN  G AG  +N + A   S KD I   NVNS ++QN  G +++ NQ  TQC+ T 
Sbjct: 634 TTLGLNAGGVAGPTDNLDSAPGSSSKDSIR--NVNSHSIQN-GGANSSMNQTSTQCQVTN 690

Query: 202 GGFEQSTLVLDSGHASLPNDRGAVNPSKEDNLVSD 306
             FEQ  LV  S  AS  +     +  + DN  S+
Sbjct: 691 ERFEQPALVQSSAQASEVDSGALKSADENDNAPSE 725


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