BLASTX nr result

ID: Glycyrrhiza23_contig00009256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009256
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like ...    59   3e-07
ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glyc...    59   3e-07
gb|AFK38454.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_003556111.1| PREDICTED: 60S ribosomal protein L36-3-like ...    57   1e-06
gb|AFK47188.1| unknown [Medicago truncatula]                           55   8e-06

>ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
          Length = 110

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 3   LGTHKRAKKKREEMSNVLRKMRAGGAGD 86
           LGTHKRAKKKREEMSNVLRKMRAGGAGD
Sbjct: 80  LGTHKRAKKKREEMSNVLRKMRAGGAGD 107


>ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glycine max]
          Length = 110

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 3   LGTHKRAKKKREEMSNVLRKMRAGGAGD 86
           LGTHKRAKKKREEMSNVLRKMRAGGAGD
Sbjct: 80  LGTHKRAKKKREEMSNVLRKMRAGGAGD 107


>gb|AFK38454.1| unknown [Lotus japonicus]
          Length = 110

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 3   LGTHKRAKKKREEMSNVLRKMRAGGAGD 86
           LGTHKRAK+KREEMSNVLRKMRAGGAGD
Sbjct: 80  LGTHKRAKRKREEMSNVLRKMRAGGAGD 107


>ref|XP_003556111.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
           gi|356575978|ref|XP_003556112.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform 1 [Glycine max]
           gi|356575980|ref|XP_003556113.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform 2 [Glycine max]
           gi|255645551|gb|ACU23270.1| unknown [Glycine max]
          Length = 110

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 3   LGTHKRAKKKREEMSNVLRKMRAGGAGD 86
           LGTHKRAKKKREEMS+VLRKMRAGGAGD
Sbjct: 80  LGTHKRAKKKREEMSSVLRKMRAGGAGD 107


>gb|AFK47188.1| unknown [Medicago truncatula]
          Length = 111

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/29 (96%), Positives = 28/29 (96%), Gaps = 1/29 (3%)
 Frame = +3

Query: 3   LGTHKRAKKKREEMSNVLRKMRA-GGAGD 86
           LGTHKRAKKKREEMSNVLRKMRA GGAGD
Sbjct: 80  LGTHKRAKKKREEMSNVLRKMRAGGGAGD 108


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