BLASTX nr result

ID: Glycyrrhiza23_contig00009248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009248
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Me...   132   1e-28
ref|XP_003517103.1| PREDICTED: upstream activation factor subuni...   124   2e-26
ref|XP_003537709.1| PREDICTED: upstream activation factor subuni...   124   3e-26
gb|ACU20642.1| unknown [Glycine max]                                  112   1e-22
ref|XP_003537710.1| PREDICTED: uncharacterized protein LOC100795...   104   2e-20

>ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
           gi|355513817|gb|AES95440.1| Upstream activation factor
           subunit UAF30 [Medicago truncatula]
           gi|388497934|gb|AFK37033.1| unknown [Medicago
           truncatula]
          Length = 134

 Score =  132 bits (331), Expect = 1e-28
 Identities = 66/93 (70%), Positives = 75/93 (80%)
 Frame = +2

Query: 227 TTVKKTVSNRGSGGIQKVVPVSSELGKFIGAPEVSRTDAVKRVWEYIXXXXXXXXXXXXE 406
           T VKKTV+++ +GGIQKVV V+SELG FIGAPEVSRT+AVK+VWEYI            E
Sbjct: 41  TAVKKTVTSKSTGGIQKVVQVTSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQNPNNKKE 100

Query: 407 IFCDEKLKTIFDGKDKVGFTEIARLLANHFVKS 505
           IFCD+KLKTIFDGKDKV FTEIA+LLA HFVKS
Sbjct: 101 IFCDDKLKTIFDGKDKVVFTEIAKLLATHFVKS 133


>ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  124 bits (312), Expect = 2e-26
 Identities = 64/92 (69%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
 Frame = +2

Query: 233 VKKTVSNRGSG-GIQKVVPVSSELGKFIGAPEVSRTDAVKRVWEYIXXXXXXXXXXXXEI 409
           VKKT + R +  GIQKVVPVSSELG F+GAP+VSRT+AVK+VW YI            EI
Sbjct: 40  VKKTAAPRTTNSGIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEI 99

Query: 410 FCDEKLKTIFDGKDKVGFTEIARLLANHFVKS 505
           FCDEKLKTIF+GKDKVGFTEIA+LL+NHFVKS
Sbjct: 100 FCDEKLKTIFEGKDKVGFTEIAKLLSNHFVKS 131


>ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  124 bits (311), Expect = 3e-26
 Identities = 64/93 (68%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
 Frame = +2

Query: 233 VKKTVSNRGSG-GIQKVVPVSSELGKFIGAPEVSRTDAVKRVWEYIXXXXXXXXXXXXEI 409
           VKK  + R +  GIQKVVPVSSELG F+GAP+VSRTDAVK+VW YI            EI
Sbjct: 40  VKKPAAPRTTNSGIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEI 99

Query: 410 FCDEKLKTIFDGKDKVGFTEIARLLANHFVKSG 508
           FCDEKLKTIF+GKDKVGFTEIA+LL++HFVKSG
Sbjct: 100 FCDEKLKTIFEGKDKVGFTEIAKLLSSHFVKSG 132


>gb|ACU20642.1| unknown [Glycine max]
          Length = 137

 Score =  112 bits (279), Expect = 1e-22
 Identities = 68/137 (49%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
 Frame = -2

Query: 493 MVSQQSGNLCEPYFIFPIKNGLQLFITKDLLLIVRILKILQLDVFPDSFDGVGSGDLRCA 314
           M  QQ  NLCEP  IFP+KNGLQLFITKDLLLI  ILKILQLDV PD  DGVGS  LR A
Sbjct: 1   MARQQFSNLCEPNLIFPLKNGLQLFITKDLLLICWILKILQLDVGPDFLDGVGSRHLRSA 60

Query: 313 DELAELGRHRNHLLNAPAAPV---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGTCS 143
           +E++ELGRHRNHLL A                                      S G  S
Sbjct: 61  EEVSELGRHRNHLLYAGVGGPRRGRLFHGGFCSGSAGRNGFLLGRTLRRRGHERSPGDRS 120

Query: 142 ENPNCCHDRFARTHYSF 92
           ENP+ CHDR  +  + F
Sbjct: 121 ENPSRCHDRSLKPSFVF 137


>ref|XP_003537710.1| PREDICTED: uncharacterized protein LOC100795839 [Glycine max]
          Length = 141

 Score =  104 bits (260), Expect = 2e-20
 Identities = 67/141 (47%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
 Frame = -2

Query: 493 MVSQQSGNLCEPYFIFPIKNGLQLFITKDLLLIVRILK----ILQLDVFPDSFDGVGSGD 326
           M  QQ  NLCEP  IFP+KNGLQLFITKDLLLI  IL+    ILQLDV PD  DGVGS  
Sbjct: 1   MARQQFSNLCEPNLIFPLKNGLQLFITKDLLLICWILQKNSSILQLDVGPDFLDGVGSRH 60

Query: 325 LRCADELAELGRHRNHLLNAPAAPV---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA 155
           LR A+E++ELGRHRNHLL A                                      S 
Sbjct: 61  LRSAEEVSELGRHRNHLLYAGVGGPRRGRLFHGGFCSGSAGRNGFLLGRTLRRRGHERSP 120

Query: 154 GTCSENPNCCHDRFARTHYSF 92
           G  SENP+ CHDR  +  + F
Sbjct: 121 GDRSENPSRCHDRSLKPSFVF 141


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