BLASTX nr result

ID: Glycyrrhiza23_contig00009238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009238
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL36992.1| class IV chitinase [Medicago sativa]                   481   e-133
gb|AFK40619.1| unknown [Medicago truncatula]                          478   e-132
gb|AAR87869.1| class IV chitinase precursor [Medicago truncatula]     475   e-131
ref|XP_003597548.1| Endochitinase PR4 [Medicago truncatula] gi|3...   474   e-131
emb|CAA40474.1| chitinase [Phaseolus vulgaris]                        461   e-127

>gb|ACL36992.1| class IV chitinase [Medicago sativa]
          Length = 282

 Score =  481 bits (1239), Expect = e-133
 Identities = 223/282 (79%), Positives = 243/282 (86%), Gaps = 8/282 (2%)
 Frame = -1

Query: 1069 MMRTGNKLLSI----LLVAGALFCVVIENVSGQNCGCASGLCCSQYGYCGEGDAYCGTGC 902
            M   GNK LSI    L +A  +  +V +NVS QNCGCA G+CCSQYGYCG GDAYCGTGC
Sbjct: 1    MTMMGNKSLSICMATLAIAFFIMIMVPKNVSAQNCGCAEGVCCSQYGYCGNGDAYCGTGC 60

Query: 901  REGPCYTQSPPP----NDVNVADIVTPEFFNGIIDQADSGCAGKSFYTRAAFLDALNSYN 734
            ++GPCY    PP    ND NVADI+T +FFN IIDQADS CAGK+FYTRAAFLDALNSYN
Sbjct: 61   KQGPCYAGQTPPSLPNNDANVADILTQDFFNSIIDQADSSCAGKNFYTRAAFLDALNSYN 120

Query: 733  EFGRIGSVDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCEEDNTEYPCAPNKGYYG 554
            +FGR GS+DDSKRE+AAAFAHFTHETGHFCY EEIDG SKDYC+E+NTE+PCAPNKGYYG
Sbjct: 121  QFGRSGSLDDSKREVAAAFAHFTHETGHFCYTEEIDGPSKDYCDENNTEWPCAPNKGYYG 180

Query: 553  RGPIQLSWNFNYGPAGRDNGFDGLNSPETVANDVVVSFKTALWYWMRNVRPVISQGFGAT 374
            RGPIQLSWN+NYGPAGRDNGFDGLNSPETVAND VVSFKTALWYWM NV  VI+QGFGAT
Sbjct: 181  RGPIQLSWNYNYGPAGRDNGFDGLNSPETVANDAVVSFKTALWYWMNNVHGVINQGFGAT 240

Query: 373  IRAINGALECDGANPNTVQARVNYYTQYCSQLGVAPGDNLTC 248
            IRAING LECDGANP+TVQ RV YYTQYCS+LGVAPGDNLTC
Sbjct: 241  IRAINGRLECDGANPSTVQTRVGYYTQYCSELGVAPGDNLTC 282


>gb|AFK40619.1| unknown [Medicago truncatula]
          Length = 282

 Score =  478 bits (1229), Expect = e-132
 Identities = 222/282 (78%), Positives = 241/282 (85%), Gaps = 8/282 (2%)
 Frame = -1

Query: 1069 MMRTGNKLLSI----LLVAGALFCVVIENVSGQNCGCASGLCCSQYGYCGEGDAYCGTGC 902
            M   GNK LSI    L +A  +  +V +NVS QNCGCA G+CCSQYGYCG GDAYCGTGC
Sbjct: 1    MTMMGNKSLSICMATLAIAFFIMIMVPKNVSAQNCGCAEGVCCSQYGYCGNGDAYCGTGC 60

Query: 901  REGPCYTQSPPP----NDVNVADIVTPEFFNGIIDQADSGCAGKSFYTRAAFLDALNSYN 734
            ++GPCY    PP    ND NVADI+T +FFN IIDQADS CAGK+FYTRAAFLDALNSYN
Sbjct: 61   KQGPCYAGQTPPSLPNNDANVADILTQDFFNRIIDQADSSCAGKNFYTRAAFLDALNSYN 120

Query: 733  EFGRIGSVDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCEEDNTEYPCAPNKGYYG 554
            +FGR GS+DDSKRE+AAAFAHFTHETGHFCY EEIDG SKDYC+E NTE+PCAPNKGYYG
Sbjct: 121  QFGRSGSLDDSKREVAAAFAHFTHETGHFCYTEEIDGPSKDYCDEGNTEWPCAPNKGYYG 180

Query: 553  RGPIQLSWNFNYGPAGRDNGFDGLNSPETVANDVVVSFKTALWYWMRNVRPVISQGFGAT 374
            RGPIQLSWN+NYGPAGRDNGFDGLNSPETVAND  VSFKTALWYWM NV  VI+QGFGAT
Sbjct: 181  RGPIQLSWNYNYGPAGRDNGFDGLNSPETVANDPTVSFKTALWYWMNNVHGVINQGFGAT 240

Query: 373  IRAINGALECDGANPNTVQARVNYYTQYCSQLGVAPGDNLTC 248
            IRAING LECDGANP+TVQ RV YYTQYCS+LGVAPGDNLTC
Sbjct: 241  IRAINGRLECDGANPSTVQTRVGYYTQYCSELGVAPGDNLTC 282


>gb|AAR87869.1| class IV chitinase precursor [Medicago truncatula]
          Length = 282

 Score =  475 bits (1222), Expect = e-131
 Identities = 221/282 (78%), Positives = 240/282 (85%), Gaps = 8/282 (2%)
 Frame = -1

Query: 1069 MMRTGNKLLSI----LLVAGALFCVVIENVSGQNCGCASGLCCSQYGYCGEGDAYCGTGC 902
            M   GNK LSI    L +A  +  +V +NVS QNCGCA G+CCSQYGYCG GDAYCGTGC
Sbjct: 1    MTMMGNKSLSICMATLAIAFFIMIMVPKNVSAQNCGCAEGVCCSQYGYCGNGDAYCGTGC 60

Query: 901  REGPCYTQSPPP----NDVNVADIVTPEFFNGIIDQADSGCAGKSFYTRAAFLDALNSYN 734
            ++GPCY    PP    ND NVADI+T +FFN IIDQADS CAGK+FYTRAAFLDALNSYN
Sbjct: 61   KQGPCYAGQTPPSLPNNDANVADILTQDFFNRIIDQADSSCAGKNFYTRAAFLDALNSYN 120

Query: 733  EFGRIGSVDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCEEDNTEYPCAPNKGYYG 554
            +FGR GS+D SKRE+AAAFAHFTHETGHFCY EEIDG SKDYC+E NTE+PCAPNKGYYG
Sbjct: 121  QFGRSGSLDGSKREVAAAFAHFTHETGHFCYTEEIDGPSKDYCDEGNTEWPCAPNKGYYG 180

Query: 553  RGPIQLSWNFNYGPAGRDNGFDGLNSPETVANDVVVSFKTALWYWMRNVRPVISQGFGAT 374
            RGPIQLSWN+NYGPAGRDNGFDGLNSPETVAND  VSFKTALWYWM NV  VI+QGFGAT
Sbjct: 181  RGPIQLSWNYNYGPAGRDNGFDGLNSPETVANDPTVSFKTALWYWMNNVHGVINQGFGAT 240

Query: 373  IRAINGALECDGANPNTVQARVNYYTQYCSQLGVAPGDNLTC 248
            IRAING LECDGANP+TVQ RV YYTQYCS+LGVAPGDNLTC
Sbjct: 241  IRAINGRLECDGANPSTVQTRVGYYTQYCSELGVAPGDNLTC 282


>ref|XP_003597548.1| Endochitinase PR4 [Medicago truncatula] gi|355486596|gb|AES67799.1|
            Endochitinase PR4 [Medicago truncatula]
          Length = 553

 Score =  474 bits (1220), Expect = e-131
 Identities = 221/281 (78%), Positives = 240/281 (85%), Gaps = 8/281 (2%)
 Frame = -1

Query: 1069 MMRTGNKLLSI----LLVAGALFCVVIENVSGQNCGCASGLCCSQYGYCGEGDAYCGTGC 902
            M   GNK LSI    L +A  +  +V +NVS QNCGCA G+CCSQYGYCG GDAYCGTGC
Sbjct: 1    MTMMGNKSLSICMATLAIAFFIMIMVPKNVSAQNCGCAEGVCCSQYGYCGNGDAYCGTGC 60

Query: 901  REGPCYTQSPPP----NDVNVADIVTPEFFNGIIDQADSGCAGKSFYTRAAFLDALNSYN 734
            ++GPCY    PP    ND NVADI+T +FFN IIDQADS CAGK+FYTRAAFLDALNSYN
Sbjct: 61   KQGPCYAGQTPPSLPNNDANVADILTQDFFNRIIDQADSSCAGKNFYTRAAFLDALNSYN 120

Query: 733  EFGRIGSVDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCEEDNTEYPCAPNKGYYG 554
            +FGR GS+DDSKRE+AAAFAHFTHETGHFCY EEIDG SKDYC+E NTE+PCAPNKGYYG
Sbjct: 121  QFGRSGSLDDSKREVAAAFAHFTHETGHFCYTEEIDGPSKDYCDEGNTEWPCAPNKGYYG 180

Query: 553  RGPIQLSWNFNYGPAGRDNGFDGLNSPETVANDVVVSFKTALWYWMRNVRPVISQGFGAT 374
            RGPIQLSWN+NYGPAGRDNGFDGLNSPETVAND  VSFKTALWYWM NV  VI+QGFGAT
Sbjct: 181  RGPIQLSWNYNYGPAGRDNGFDGLNSPETVANDPTVSFKTALWYWMNNVHGVINQGFGAT 240

Query: 373  IRAINGALECDGANPNTVQARVNYYTQYCSQLGVAPGDNLT 251
            IRAING LECDGANP+TVQ RV YYTQYCS+LGVAPGDNLT
Sbjct: 241  IRAINGRLECDGANPSTVQTRVGYYTQYCSELGVAPGDNLT 281



 Score =  444 bits (1143), Expect = e-122
 Identities = 205/258 (79%), Positives = 225/258 (87%), Gaps = 7/258 (2%)
 Frame = -1

Query: 1000 ENVSGQNCGCASGLCCSQYGYCGEGDAYCGTGCREGPCYTQ--SP----PPNDVNVADIV 839
            +N S QNCGC  GLCCS++GYCG  D YCGTGC++GPCY    SP    P NDVNVADIV
Sbjct: 296  KNTSAQNCGCEEGLCCSEHGYCGNTDPYCGTGCKQGPCYAGQISPSTPGPSNDVNVADIV 355

Query: 838  TPEFFNGIIDQADSGCAGKSFYTRAAFLDALNSYNEFGRIGSVDDSKREIAAAFAHFTHE 659
            T EFFN IIDQADS CAGK+FY+RA FLDAL SYN+FGR+GSVDDSKREIAAAFAHFTHE
Sbjct: 356  TQEFFNSIIDQADSSCAGKNFYSRAVFLDALGSYNQFGRVGSVDDSKREIAAAFAHFTHE 415

Query: 658  TGHFCYIEEIDGASKDYCEEDNTEYPCAPNKGYYGRGPIQLSWNFNYGPAGRDNGFDGLN 479
            TGHFCYIEE DGASKDYC+E NTEYPCAPNKGYYGRGPIQLSWNFNYGPAG+D+GFD LN
Sbjct: 416  TGHFCYIEEKDGASKDYCDESNTEYPCAPNKGYYGRGPIQLSWNFNYGPAGKDSGFDELN 475

Query: 478  SPETVANDVVVSFKTALWYWMRNVRPVIS-QGFGATIRAINGALECDGANPNTVQARVNY 302
            SPETVAND +VSFKTALWYWM +V  V++ QGFGAT+RAING LECDG +PNTV+ARV+Y
Sbjct: 476  SPETVANDPLVSFKTALWYWMNHVHNVMNQQGFGATVRAINGRLECDGVDPNTVKARVDY 535

Query: 301  YTQYCSQLGVAPGDNLTC 248
            YTQYCSQLGVAPGD L C
Sbjct: 536  YTQYCSQLGVAPGDKLNC 553


>emb|CAA40474.1| chitinase [Phaseolus vulgaris]
          Length = 271

 Score =  461 bits (1187), Expect = e-127
 Identities = 218/272 (80%), Positives = 244/272 (89%), Gaps = 2/272 (0%)
 Frame = -1

Query: 1057 GNKLLSILLVAGALFCVVIENVSGQNCGCASGLCCSQYGYCGEGDAYCGTGCREGPCYTQ 878
            GNKL+ ++LVA AL  +  +NVS QNCGCA GLCCSQYGYCG G+ YCGTGC++GPC T 
Sbjct: 2    GNKLV-LVLVAVALV-MGPKNVSAQNCGCAEGLCCSQYGYCGTGEDYCGTGCQQGPCTTA 59

Query: 877  SPPP-NDVNVADIVTPEFFNGIIDQADSGCAGKSFYTRAAFLDALNSYNEFGRIGSVDDS 701
            SPPP N+VNVADIVT +FFNGIIDQADSGCAGK+FYTR AFL ALNSY +FGR+GS DDS
Sbjct: 60   SPPPSNNVNVADIVTADFFNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDS 119

Query: 700  KREIAAAFAHFTHETGHFCYIEEIDGASKDYCEEDN-TEYPCAPNKGYYGRGPIQLSWNF 524
            KREIAAAFAHFTHETGHFCYIEEIDGASKDYC+E++  +YPC+ +KGY+GRGPIQLSWNF
Sbjct: 120  KREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNF 179

Query: 523  NYGPAGRDNGFDGLNSPETVANDVVVSFKTALWYWMRNVRPVISQGFGATIRAINGALEC 344
            NYGPAG  N FDGL +PETV+NDVVVSFKTALWYWM++VRPVI+QGFGATIRAINGALEC
Sbjct: 180  NYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALEC 239

Query: 343  DGANPNTVQARVNYYTQYCSQLGVAPGDNLTC 248
            DGANP TVQARVNYYT+YC QLGVA GDNLTC
Sbjct: 240  DGANPTTVQARVNYYTEYCRQLGVATGDNLTC 271


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