BLASTX nr result

ID: Glycyrrhiza23_contig00009227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009227
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780...   484   e-134
ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799...   470   e-130
ref|XP_003611682.1| RNA-binding protein with multiple splicing [...   470   e-130
emb|CBI21383.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   404   e-110

>ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
          Length = 338

 Score =  484 bits (1246), Expect = e-134
 Identities = 249/327 (76%), Positives = 263/327 (80%), Gaps = 2/327 (0%)
 Frame = +3

Query: 3   QTQPSGLLTYQYYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FGSYA 176
           Q QPSGLL YQYYQ                                         FGSY 
Sbjct: 10  QPQPSGLLPYQYYQQPPPPPPPPMMAVVPPPPGAVVPPAHHLHPPYVAQHQQQAVFGSYG 69

Query: 177 PSQSSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQPFAFAVFANQQ 356
             QSS++EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSP+NSSQPFAFAVFA+Q+
Sbjct: 70  APQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPSNSSQPFAFAVFASQK 129

Query: 357 SAIMAMHALNGLVFDLEKGSTLYIDLAKSNSRAKRTRIDDERAGSDKKARGSAPSWATPD 536
           SAI+AMHALNGLVFDLEKGSTLYIDLAKSNSR+KRTRIDDER G+DKKARG  PSW+TPD
Sbjct: 130 SAILAMHALNGLVFDLEKGSTLYIDLAKSNSRSKRTRIDDERVGADKKARGLTPSWSTPD 189

Query: 537 SGVSSIHMPGMGNPAFNTNTIGYPSAQSDGNADGNALHDSLFPNLKKCSTPYIPQNPIPC 716
           SGV SIHMPGMGNPAFNTNT GYPSAQS GNADG+A+ DSLF NLKK STPYIPQN  PC
Sbjct: 190 SGVGSIHMPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFANLKKSSTPYIPQNSTPC 249

Query: 717 ATLFVANLGPSCNEPELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDVSGSTDALNILQG 896
           ATLFVANLGPSCNE ELIQVFSR PGFLKLKMQSTYGAPVAFVDFQDV  STDALN LQG
Sbjct: 250 ATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQG 309

Query: 897 TILRSSPAGEGMRIEYAKSRMGMRKKP 977
           TIL SS +GEGMR+EYAKSRMGMR+KP
Sbjct: 310 TILHSSQSGEGMRLEYAKSRMGMRRKP 336


>ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
          Length = 332

 Score =  470 bits (1210), Expect = e-130
 Identities = 244/325 (75%), Positives = 256/325 (78%)
 Frame = +3

Query: 3   QTQPSGLLTYQYYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGSYAPS 182
           Q QPS LL+YQYYQ                                       F SY  S
Sbjct: 7   QPQPSDLLSYQYYQPPPPPLPPLMAVVPPPPGAVVQPAHHVHPSYMAQHQAV-FASYGVS 65

Query: 183 QSSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQPFAFAVFANQQSA 362
           QSS++EVRTLFVAGLPEDVKPREIYNLFREFP YESSHLRSP+NSSQPFAFAVFA+QQSA
Sbjct: 66  QSSTHEVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSA 125

Query: 363 IMAMHALNGLVFDLEKGSTLYIDLAKSNSRAKRTRIDDERAGSDKKARGSAPSWATPDSG 542
           IMA HALNGLVFDLEKGS LYIDLAKSNSR+KRTRIDDERAG+DKKARG  PSWATPDSG
Sbjct: 126 IMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWATPDSG 185

Query: 543 VSSIHMPGMGNPAFNTNTIGYPSAQSDGNADGNALHDSLFPNLKKCSTPYIPQNPIPCAT 722
           V SIHMPGMGNPAFNTN  GYPSAQS GNADG+ +   LF NLKK STPY+PQN  PCAT
Sbjct: 186 VGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNSTPCAT 245

Query: 723 LFVANLGPSCNEPELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDVSGSTDALNILQGTI 902
           LFVANLG SCNE ELIQVFSR PGFLKLKMQSTYGAPVAFVDFQDV  STDALN LQGTI
Sbjct: 246 LFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSLQGTI 305

Query: 903 LRSSPAGEGMRIEYAKSRMGMRKKP 977
           L SS +GEGMR+EYAKSRMGMRKKP
Sbjct: 306 LHSSQSGEGMRVEYAKSRMGMRKKP 330


>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
            gi|355513017|gb|AES94640.1| RNA-binding protein with
            multiple splicing [Medicago truncatula]
          Length = 340

 Score =  470 bits (1209), Expect = e-130
 Identities = 242/331 (73%), Positives = 259/331 (78%), Gaps = 5/331 (1%)
 Frame = +3

Query: 3    QTQPSGLLTYQYYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----FGS 170
            QTQP  LLTYQYY                                            + S
Sbjct: 10   QTQPPNLLTYQYYPPQQPPPPPQYQPIPVIPPPPGAPLPPPHHPHPHPQYIPQQQQVYDS 69

Query: 171  YAPSQ-SSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQPFAFAVFA 347
            Y PS  +S+N+VRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQ FAFAVF+
Sbjct: 70   YVPSPLASTNDVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQAFAFAVFS 129

Query: 348  NQQSAIMAMHALNGLVFDLEKGSTLYIDLAKSNSRAKRTRIDDERAGSDKKARGSAPSWA 527
            NQQSAIMA+HALNG++FDLEKGSTLYIDLAKSNSRAKR RIDD+RA SDKKARGSA SW 
Sbjct: 130  NQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDDDRASSDKKARGSASSWP 189

Query: 528  TPDSGVSSIHMPGMGNPAFNTNTIGYPSAQSDGNADGNALHDSLFPNLKKCSTPYIPQNP 707
            TPDSGVSSIHMPGMGNPAFNTN IGYP AQS G ADGNA+HD LF NLKKCS PYIP N 
Sbjct: 190  TPDSGVSSIHMPGMGNPAFNTNMIGYPPAQSHGIADGNAMHDGLFLNLKKCSNPYIPTNT 249

Query: 708  IPCATLFVANLGPSCNEPELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDVSGSTDALNI 887
             PCATLFVANLGPSCNE ELIQVFSR PGFLKLKMQSTYGAPV+FVDF+D+  +T ALN 
Sbjct: 250  TPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAPVSFVDFKDIPSATVALNS 309

Query: 888  LQGTILRSSPAGEGMRIEYAKSRMGMRKKPK 980
            LQGTIL SSPAGEGMR+EYAKSRMGMR+KPK
Sbjct: 310  LQGTILYSSPAGEGMRLEYAKSRMGMRRKPK 340


>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  404 bits (1037), Expect = e-110
 Identities = 206/276 (74%), Positives = 228/276 (82%), Gaps = 3/276 (1%)
 Frame = +3

Query: 162 FGSYAPS---QSSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQPFA 332
           F SYAP    Q+S +EVRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRSP+ +SQPFA
Sbjct: 61  FASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFA 120

Query: 333 FAVFANQQSAIMAMHALNGLVFDLEKGSTLYIDLAKSNSRAKRTRIDDERAGSDKKARGS 512
           FAVF +QQSAI AMHALNG+VFDLEKGSTLYIDLAKSNSR+KR+R DDER G DKK +GS
Sbjct: 121 FAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGS 180

Query: 513 APSWATPDSGVSSIHMPGMGNPAFNTNTIGYPSAQSDGNADGNALHDSLFPNLKKCSTPY 692
           A     PDSGV S+HMPGMGN A+  + IGYPS QS GN DG AL+++    L   S PY
Sbjct: 181 AGFSRPPDSGVGSVHMPGMGNSAY--SMIGYPSTQSHGNFDGRALNETP-AKLNNSSAPY 237

Query: 693 IPQNPIPCATLFVANLGPSCNEPELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDVSGST 872
            PQN  PC TLFVANLGP+C+E ELI +FSRCPGFLKLKMQSTYG PVAFVDFQD   ST
Sbjct: 238 FPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCST 297

Query: 873 DALNILQGTILRSSPAGEGMRIEYAKSRMGMRKKPK 980
            ALN LQGT+L SSPAGEGMRIEYAKSRMG+R+KPK
Sbjct: 298 GALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRKPK 333


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  404 bits (1037), Expect = e-110
 Identities = 206/276 (74%), Positives = 228/276 (82%), Gaps = 3/276 (1%)
 Frame = +3

Query: 162 FGSYAPS---QSSSNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQPFA 332
           F SYAP    Q+S +EVRTLF+AGLPEDVKPREIYNLFREFPGYESSHLRSP+ +SQPFA
Sbjct: 64  FASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFA 123

Query: 333 FAVFANQQSAIMAMHALNGLVFDLEKGSTLYIDLAKSNSRAKRTRIDDERAGSDKKARGS 512
           FAVF +QQSAI AMHALNG+VFDLEKGSTLYIDLAKSNSR+KR+R DDER G DKK +GS
Sbjct: 124 FAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGS 183

Query: 513 APSWATPDSGVSSIHMPGMGNPAFNTNTIGYPSAQSDGNADGNALHDSLFPNLKKCSTPY 692
           A     PDSGV S+HMPGMGN A+  + IGYPS QS GN DG AL+++    L   S PY
Sbjct: 184 AGFSRPPDSGVGSVHMPGMGNSAY--SMIGYPSTQSHGNFDGRALNETP-AKLNNSSAPY 240

Query: 693 IPQNPIPCATLFVANLGPSCNEPELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDVSGST 872
            PQN  PC TLFVANLGP+C+E ELI +FSRCPGFLKLKMQSTYG PVAFVDFQD   ST
Sbjct: 241 FPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCST 300

Query: 873 DALNILQGTILRSSPAGEGMRIEYAKSRMGMRKKPK 980
            ALN LQGT+L SSPAGEGMRIEYAKSRMG+R+KPK
Sbjct: 301 GALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRKPK 336


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