BLASTX nr result

ID: Glycyrrhiza23_contig00009225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009225
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   414   e-113
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   409   e-112
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   333   5e-89
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              333   5e-89
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]   333   5e-89

>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  414 bits (1064), Expect = e-113
 Identities = 211/250 (84%), Positives = 219/250 (87%)
 Frame = -2

Query: 969  AIKNVDKQLREKCIHLLAFISRGTQRHGELSSRNPPLLCPPTVKEDFEICSKPSYINSRN 790
            AIKNVD QLREKCIHLLAFISRGTQR G+ S RNPPLLCPPT+KEDFEI SKPS INSRN
Sbjct: 1718 AIKNVDTQLREKCIHLLAFISRGTQRLGDSSIRNPPLLCPPTLKEDFEIWSKPSCINSRN 1777

Query: 789  GWFALSPLGCVPKPKISSFSTALSIYGQVAESTDPVPKTCYSDTVAVQVYRITFLLLKFL 610
            GWFALSP GCVPKPKISSFSTALSIYGQ  E+T PV KTC+SDTVAVQVYRITFLLLKFL
Sbjct: 1778 GWFALSPPGCVPKPKISSFSTALSIYGQADETTGPVSKTCFSDTVAVQVYRITFLLLKFL 1837

Query: 609  CLQAEGAAKRAKEVGFVDLAHFPELPMPEILHGLQDQAFAIIKELCQANKLRESPETQNV 430
            CLQAEGAAKRA+EVGF+DLAHFPELPMPEILHGLQDQA AII ELCQANKL +S E +NV
Sbjct: 1838 CLQAEGAAKRAEEVGFIDLAHFPELPMPEILHGLQDQAIAIIAELCQANKLTDSLEIKNV 1897

Query: 429  CNXXXXXXXXXXXXXLCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHTFLKASSKSLKQ 250
            CN             LCVLQICGIRPVLGRVEDFSKEAKSLFSALEGH FLKASS SLKQ
Sbjct: 1898 CNLLSQILEMALQLELCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHAFLKASSNSLKQ 1957

Query: 249  MISYIYPGLL 220
            MISYIYPGLL
Sbjct: 1958 MISYIYPGLL 1967


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  409 bits (1052), Expect = e-112
 Identities = 205/256 (80%), Positives = 220/256 (85%)
 Frame = -2

Query: 969  AIKNVDKQLREKCIHLLAFISRGTQRHGELSSRNPPLLCPPTVKEDFEICSKPSYINSRN 790
            AI+NVD+QLREKCIHLLAFISRG+QR  ELSSRN PLLCPPTVKE+FEIC KPSY+NS+N
Sbjct: 1714 AIRNVDRQLREKCIHLLAFISRGSQRLSELSSRNAPLLCPPTVKEEFEICLKPSYVNSKN 1773

Query: 789  GWFALSPLGCVPKPKISSFSTALSIYGQVAESTDPVPKTCYSDTVAVQVYRITFLLLKFL 610
            GWFALSPLGCVPKPKISSFSTALS YGQ  ES +P  KT +SDTVA+QVYRI FLLLKFL
Sbjct: 1774 GWFALSPLGCVPKPKISSFSTALSTYGQATESRNPASKTGFSDTVALQVYRIAFLLLKFL 1833

Query: 609  CLQAEGAAKRAKEVGFVDLAHFPELPMPEILHGLQDQAFAIIKELCQANKLRESPETQNV 430
            CLQ EGAAKRA+EVGFVDLAHFPELPMPEILHGLQDQA AI  ELC+ANKL+ SPETQ+V
Sbjct: 1834 CLQTEGAAKRAEEVGFVDLAHFPELPMPEILHGLQDQAIAITTELCEANKLKVSPETQDV 1893

Query: 429  CNXXXXXXXXXXXXXLCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHTFLKASSKSLKQ 250
            CN             LCVLQICGIRPVLGRVEDFSKEAKSLFSALEGH FLKAS  SLKQ
Sbjct: 1894 CNLLLQILEMALHLELCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHAFLKASCNSLKQ 1953

Query: 249  MISYIYPGLLQAESLI 202
            MIS +YPGLLQ E+ I
Sbjct: 1954 MISCVYPGLLQGENFI 1969


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  333 bits (853), Expect = 5e-89
 Identities = 171/260 (65%), Positives = 201/260 (77%), Gaps = 4/260 (1%)
 Frame = -2

Query: 969  AIKNVDKQLREKCIHLLAFISRGTQRHGELSSRNPPLLCPPTVKEDFEICSKPSYINSRN 790
            A+K +D +LRE+ IHLLAFISRGTQRHGE  SR PPLLCPP +KEDF+   KP+++NS+N
Sbjct: 1725 AVKEMDTELRERSIHLLAFISRGTQRHGESPSRIPPLLCPPMLKEDFDFYKKPAFVNSQN 1784

Query: 789  GWFALSPLGCVPKPKISSFS---TALSIYGQVAESTDPVPKTCYSDTVAVQVYRITFLLL 619
            GWFALSP GC+ K K SS S   TAL +  Q +E+ D V +T +SD VA+Q+YRITFLLL
Sbjct: 1785 GWFALSPRGCLSKSKFSSVSIKSTALVVKDQSSENLD-VSQTHFSDIVALQIYRITFLLL 1843

Query: 618  KFLCLQAEGAAKRAKEVGFVDLAHFPELPMPEILHGLQDQAFAIIKELCQANKLRE-SPE 442
            KFLCLQAEGAA+RA+EVGFVDLAHFPELPMPEILHGLQDQA AI+ ELC+ANKL++  PE
Sbjct: 1844 KFLCLQAEGAARRAEEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCEANKLKKIEPE 1903

Query: 441  TQNVCNXXXXXXXXXXXXXLCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHTFLKASSK 262
             Q+ C               CV QICGIRPVLGRVEDFSKE   L  A EGH+FLKA+ K
Sbjct: 1904 VQSTCLLLLQIMEMALYLEQCVSQICGIRPVLGRVEDFSKEVVLLIRATEGHSFLKAAVK 1963

Query: 261  SLKQMISYIYPGLLQAESLI 202
            SLKQ+IS +YPGLLQ E L+
Sbjct: 1964 SLKQIISLVYPGLLQTEGLL 1983


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  333 bits (853), Expect = 5e-89
 Identities = 171/260 (65%), Positives = 201/260 (77%), Gaps = 4/260 (1%)
 Frame = -2

Query: 969  AIKNVDKQLREKCIHLLAFISRGTQRHGELSSRNPPLLCPPTVKEDFEICSKPSYINSRN 790
            A+K +D +LRE+ IHLLAFISRGTQRHGE  SR PPLLCPP +KEDF+   KP+++NS+N
Sbjct: 1700 AVKEMDTELRERSIHLLAFISRGTQRHGESPSRIPPLLCPPMLKEDFDFYKKPAFVNSQN 1759

Query: 789  GWFALSPLGCVPKPKISSFS---TALSIYGQVAESTDPVPKTCYSDTVAVQVYRITFLLL 619
            GWFALSP GC+ K K SS S   TAL +  Q +E+ D V +T +SD VA+Q+YRITFLLL
Sbjct: 1760 GWFALSPRGCLSKSKFSSVSIKSTALVVKDQSSENLD-VSQTHFSDIVALQIYRITFLLL 1818

Query: 618  KFLCLQAEGAAKRAKEVGFVDLAHFPELPMPEILHGLQDQAFAIIKELCQANKLRE-SPE 442
            KFLCLQAEGAA+RA+EVGFVDLAHFPELPMPEILHGLQDQA AI+ ELC+ANKL++  PE
Sbjct: 1819 KFLCLQAEGAARRAEEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCEANKLKKIEPE 1878

Query: 441  TQNVCNXXXXXXXXXXXXXLCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHTFLKASSK 262
             Q+ C               CV QICGIRPVLGRVEDFSKE   L  A EGH+FLKA+ K
Sbjct: 1879 VQSTCLLLLQIMEMALYLEQCVSQICGIRPVLGRVEDFSKEVVLLIRATEGHSFLKAAVK 1938

Query: 261  SLKQMISYIYPGLLQAESLI 202
            SLKQ+IS +YPGLLQ E L+
Sbjct: 1939 SLKQIISLVYPGLLQTEGLL 1958


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score =  333 bits (853), Expect = 5e-89
 Identities = 171/260 (65%), Positives = 201/260 (77%), Gaps = 4/260 (1%)
 Frame = -2

Query: 969  AIKNVDKQLREKCIHLLAFISRGTQRHGELSSRNPPLLCPPTVKEDFEICSKPSYINSRN 790
            A+K +D +LRE+ IHLLAFISRGTQRHGE  SR PPLLCPP +KEDF+   KP+++NS+N
Sbjct: 1133 AVKEMDTELRERSIHLLAFISRGTQRHGESPSRIPPLLCPPMLKEDFDFYKKPAFVNSQN 1192

Query: 789  GWFALSPLGCVPKPKISSFS---TALSIYGQVAESTDPVPKTCYSDTVAVQVYRITFLLL 619
            GWFALSP GC+ K K SS S   TAL +  Q +E+ D V +T +SD VA+Q+YRITFLLL
Sbjct: 1193 GWFALSPRGCLSKSKFSSVSIKSTALVVKDQSSENLD-VSQTHFSDIVALQIYRITFLLL 1251

Query: 618  KFLCLQAEGAAKRAKEVGFVDLAHFPELPMPEILHGLQDQAFAIIKELCQANKLRE-SPE 442
            KFLCLQAEGAA+RA+EVGFVDLAHFPELPMPEILHGLQDQA AI+ ELC+ANKL++  PE
Sbjct: 1252 KFLCLQAEGAARRAEEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCEANKLKKIEPE 1311

Query: 441  TQNVCNXXXXXXXXXXXXXLCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHTFLKASSK 262
             Q+ C               CV QICGIRPVLGRVEDFSKE   L  A EGH+FLKA+ K
Sbjct: 1312 VQSTCLLLLQIMEMALYLEQCVSQICGIRPVLGRVEDFSKEVVLLIRATEGHSFLKAAVK 1371

Query: 261  SLKQMISYIYPGLLQAESLI 202
            SLKQ+IS +YPGLLQ E L+
Sbjct: 1372 SLKQIISLVYPGLLQTEGLL 1391


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