BLASTX nr result

ID: Glycyrrhiza23_contig00009211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009211
         (1921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237872.1| DEAD-box RNA helicase [Glycine max] gi|22989...   830   0.0  
ref|XP_003534303.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   829   0.0  
ref|XP_003612690.1| DEAD-box ATP-dependent RNA helicase [Medicag...   778   0.0  
emb|CBI23263.3| unnamed protein product [Vitis vinifera]              754   0.0  
ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   754   0.0  

>ref|NP_001237872.1| DEAD-box RNA helicase [Glycine max] gi|229893773|gb|ACQ90244.1|
            DEAD-box RNA helicase [Glycine max]
          Length = 537

 Score =  830 bits (2145), Expect = 0.0
 Identities = 428/537 (79%), Positives = 447/537 (83%), Gaps = 1/537 (0%)
 Frame = +3

Query: 66   MGRKHDAVLXXXXXXXXXXXXXXXXSEXXXXXXXXXXXXXLPNEQNSPKRKLDELDHQND 245
            MGRKHDAVL                SE                 ++SPKRKLDE D QN 
Sbjct: 1    MGRKHDAVLASEPVAEEAPCSPELDSEKKKKKKKKNKNKDKHQTESSPKRKLDEHDPQNG 60

Query: 246  XXXXXXXXXXXXXXXXXXXXXXXXXXDAAEG-NGDETVAGGSVAVTGKNAGDAKYAAVKT 422
                                      +   G N +ET   GSV VTG NAG+AKYAAVK+
Sbjct: 61   TESKKKKKKHHESKGNAEETNGDSNNNNGNGANREETATDGSVVVTGNNAGEAKYAAVKS 120

Query: 423  FGDSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAVMHVL 602
            F DSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAVMHVL
Sbjct: 121  FADSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAVMHVL 180

Query: 603  KKRKSKASKGRNPLCLVLSPTRELAQQISDVMCDAGKSCGVESICLYGGTSKGPQISSLK 782
             KRK K+SKGRNPL LVLSPTRELAQQISDVMCDAG+SCGV+SICLYGGTSKGPQISSLK
Sbjct: 181  GKRKGKSSKGRNPLGLVLSPTRELAQQISDVMCDAGRSCGVQSICLYGGTSKGPQISSLK 240

Query: 783  SGIDIVIGTPGRIQDLIEMGFCCLKEVSFVVLDEADRMLDMGFEQVVRSILGQTCSVRQM 962
            SGIDIVIGTPGRIQDLIEMG CCLKEVSFVVLDEADRMLDMGFEQ+VRSILGQTCS RQM
Sbjct: 241  SGIDIVIGTPGRIQDLIEMGICCLKEVSFVVLDEADRMLDMGFEQIVRSILGQTCSDRQM 300

Query: 963  VMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRLVTLLE 1142
            VMFSATWPLPVH LAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRLV LLE
Sbjct: 301  VMFSATWPLPVHYLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRLVALLE 360

Query: 1143 KYHKSQRNRVLVFVLYKMEATRVEKMLQQGGWKVVSIHGDKSQNDRTKSLSLFKKGSCPL 1322
            KYHKSQRNRVLVFVLYK+EA RVE MLQ+GGWKVVSIHGDK+Q+DRTK+LSLFK  SCPL
Sbjct: 361  KYHKSQRNRVLVFVLYKLEAKRVENMLQEGGWKVVSIHGDKAQHDRTKALSLFKNASCPL 420

Query: 1323 MVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGLAG 1502
            M+ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFF QQNKGLAG
Sbjct: 421  MIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAG 480

Query: 1503 ELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEISADAPKSHKITFDDSEDE 1673
            ELVNVLREAGQ VPDALLKFGTHVKKKESKLYGAHFKEI  DAPKS K TFDDS+++
Sbjct: 481  ELVNVLREAGQTVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKKTFDDSDED 537


>ref|XP_003534303.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Glycine max]
          Length = 537

 Score =  829 bits (2142), Expect = 0.0
 Identities = 431/538 (80%), Positives = 451/538 (83%), Gaps = 2/538 (0%)
 Frame = +3

Query: 66   MGRKHDAVLXXXXXXXXXXXXXXXXSEXXXXXXXXXXXXXLPNE-QNSPKRKLDE-LDHQ 239
            MGRKHDAVL                SE               ++  +S KRKLDE LD Q
Sbjct: 1    MGRKHDAVLVSEPVAEEVPYSPELDSEKKKKKKKKKNKNKDKHQTDSSTKRKLDEQLDPQ 60

Query: 240  NDXXXXXXXXXXXXXXXXXXXXXXXXXXDAAEGNGDETVAGGSVAVTGKNAGDAKYAAVK 419
            N                           D    N DETVA GSV VTGKNAGDAKYAAVK
Sbjct: 61   NGIESNKKKKKHHESKQNAEETNGNNNSDNG-ANRDETVADGSVVVTGKNAGDAKYAAVK 119

Query: 420  TFGDSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAVMHV 599
            +F DSGLPENVLECCKGF+KPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFG+PAVMHV
Sbjct: 120  SFADSGLPENVLECCKGFQKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGLPAVMHV 179

Query: 600  LKKRKSKASKGRNPLCLVLSPTRELAQQISDVMCDAGKSCGVESICLYGGTSKGPQISSL 779
            L KRK K+SKGRNPL LVLSPTRELAQQISDVMCDAG+SCGV+SICLYGGTSKGPQISSL
Sbjct: 180  LGKRKGKSSKGRNPLGLVLSPTRELAQQISDVMCDAGRSCGVQSICLYGGTSKGPQISSL 239

Query: 780  KSGIDIVIGTPGRIQDLIEMGFCCLKEVSFVVLDEADRMLDMGFEQVVRSILGQTCSVRQ 959
            KSGIDI+IGTPGRIQDLIEMG CCLKEVSFVVLDEADRMLDMGFEQ+VRSILGQTCS RQ
Sbjct: 240  KSGIDIIIGTPGRIQDLIEMGICCLKEVSFVVLDEADRMLDMGFEQIVRSILGQTCSDRQ 299

Query: 960  MVMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRLVTLL 1139
            MVMFSATWPLPVH LAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRL  LL
Sbjct: 300  MVMFSATWPLPVHYLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDKRLAALL 359

Query: 1140 EKYHKSQRNRVLVFVLYKMEATRVEKMLQQGGWKVVSIHGDKSQNDRTKSLSLFKKGSCP 1319
            EKYHKSQRNRVLVFVLYK+EA RVE MLQ+GGWKVVSIHGDK+Q+DRTK+LSLFK GSCP
Sbjct: 360  EKYHKSQRNRVLVFVLYKLEAKRVENMLQEGGWKVVSIHGDKAQHDRTKALSLFKNGSCP 419

Query: 1320 LMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFTQQNKGLA 1499
            LM+ATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFF QQNKGLA
Sbjct: 420  LMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLA 479

Query: 1500 GELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEISADAPKSHKITFDDSEDE 1673
            GELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEI  DAPKS K TFDDS+++
Sbjct: 480  GELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPKSQKKTFDDSDED 537


>ref|XP_003612690.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355514025|gb|AES95648.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 523

 Score =  778 bits (2010), Expect = 0.0
 Identities = 401/505 (79%), Positives = 430/505 (85%), Gaps = 10/505 (1%)
 Frame = +3

Query: 192  NEQNSPKRK-LDELDHQNDXXXXXXXXXXXXXXXXXXXXXXXXXXDAAEGNGDETVAGG- 365
            +E+ +PKRK  DE + QND                          + +E N D   AGG 
Sbjct: 35   HEETTPKRKHQDETNLQNDTESEKKSKKKKKH-------------NKSEENND---AGGV 78

Query: 366  -------SVAVTGKNAGDAKYAAVKTFGDSGLPENVLECCKGFEKPSPIQSRAWPFLLDG 524
                    + VTGKNAGD KY  VK F DSGLPENVLECCKGFEKPSPIQSRAWPFLLDG
Sbjct: 79   SVSASDEPIVVTGKNAGDEKYTPVKRFEDSGLPENVLECCKGFEKPSPIQSRAWPFLLDG 138

Query: 525  RDLIGIAATGSGKTLAFGIPAVMHVLKKRKSK-ASKGRNPLCLVLSPTRELAQQISDVMC 701
            RDLIGIAATGSGKTLAFGIPA+MHV+ KRKSK +SKGRNPLCL+LSPTRELAQQISDV+C
Sbjct: 139  RDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDVLC 198

Query: 702  DAGKSCGVESICLYGGTSKGPQISSLKSGIDIVIGTPGRIQDLIEMGFCCLKEVSFVVLD 881
            DAGKSCGVES+CLYGGT KG QIS+LKSGIDIVIGTPGRIQDL+EMG C L+EVSFVVLD
Sbjct: 199  DAGKSCGVESVCLYGGTPKGAQISALKSGIDIVIGTPGRIQDLVEMGICRLQEVSFVVLD 258

Query: 882  EADRMLDMGFEQVVRSILGQTCSVRQMVMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDL 1061
            EADRMLDMGFEQ+VRSILGQTCS RQMVMFSATWPL VH LAQEFMDPNPVKVVVGSEDL
Sbjct: 259  EADRMLDMGFEQIVRSILGQTCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDL 318

Query: 1062 AANHDVMQIVEVLDDRSRDKRLVTLLEKYHKSQRNRVLVFVLYKMEATRVEKMLQQGGWK 1241
            +ANHDVMQIVEVLD+R RDKRL+ LLEKYHKSQ+NRVLVFVLYK E TRVEKMLQQGGWK
Sbjct: 319  SANHDVMQIVEVLDERLRDKRLLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWK 378

Query: 1242 VVSIHGDKSQNDRTKSLSLFKKGSCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVH 1421
             VSI GDKSQ++RTK+LSLFK GSCPLM+ATDVAARGLDIPDVEVVIN+SFPLT EDYVH
Sbjct: 379  AVSISGDKSQHERTKALSLFKNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVH 438

Query: 1422 RIGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYG 1601
            RIGRTGRAGKKGVAHTFFT  NKGLAGELVNVLREAGQ+VPD LLKFGTHVKKKESKLYG
Sbjct: 439  RIGRTGRAGKKGVAHTFFTHLNKGLAGELVNVLREAGQVVPDDLLKFGTHVKKKESKLYG 498

Query: 1602 AHFKEISADAPKSHKITFDDSEDED 1676
            AHFKEI  DAPKS KITFD+S+DED
Sbjct: 499  AHFKEIPVDAPKSKKITFDNSDDED 523


>emb|CBI23263.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  754 bits (1948), Expect = 0.0
 Identities = 372/443 (83%), Positives = 405/443 (91%)
 Frame = +3

Query: 345  DETVAGGSVAVTGKNAGDAKYAAVKTFGDSGLPENVLECCKGFEKPSPIQSRAWPFLLDG 524
            D+   G  VAVTGK+A ++KYAA K+F +S LP++VLECC+ F +PSPIQS AWPFLLD 
Sbjct: 186  DKESRGACVAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFLLDH 245

Query: 525  RDLIGIAATGSGKTLAFGIPAVMHVLKKRKSKASKGRNPLCLVLSPTRELAQQISDVMCD 704
            RD IGIAATGSGKTLAFG+PA+MHVL KRKSK SKG NPLCLVLSPTRELAQQISDV+C+
Sbjct: 246  RDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDVLCE 305

Query: 705  AGKSCGVESICLYGGTSKGPQISSLKSGIDIVIGTPGRIQDLIEMGFCCLKEVSFVVLDE 884
            AGK CGV+S+CLYGGTSKGPQISSLKSG+DIVIGTPGR++DLIEMG CCL EVSFVVLDE
Sbjct: 306  AGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVVLDE 365

Query: 885  ADRMLDMGFEQVVRSILGQTCSVRQMVMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDLA 1064
            ADRMLDMGFE  VRSIL QTC  RQMVMFSATWPLPVHQLAQEFMDPNPVKVV+GSEDLA
Sbjct: 366  ADRMLDMGFEPEVRSILSQTCPARQMVMFSATWPLPVHQLAQEFMDPNPVKVVIGSEDLA 425

Query: 1065 ANHDVMQIVEVLDDRSRDKRLVTLLEKYHKSQRNRVLVFVLYKMEATRVEKMLQQGGWKV 1244
            ANHDVMQIVEVLDDRSRD+RL+TLL KYHKSQRNRVLVFVLYK EA RVE MLQ+ GW V
Sbjct: 426  ANHDVMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKEAARVENMLQRRGWNV 485

Query: 1245 VSIHGDKSQNDRTKSLSLFKKGSCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHR 1424
            VSIHGDK+Q  RT +LSLFKKGSCPLM+ATDVAARGLDIPDVEVVINYSFPLTTEDYVHR
Sbjct: 486  VSIHGDKAQQARTAALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHR 545

Query: 1425 IGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYGA 1604
            IGRTGRAGKKGVAHTFF Q+NKGLAGELVNVL+EAGQIVP  LLKFGTHVKKKESKLYGA
Sbjct: 546  IGRTGRAGKKGVAHTFFMQENKGLAGELVNVLKEAGQIVPADLLKFGTHVKKKESKLYGA 605

Query: 1605 HFKEISADAPKSHKITFDDSEDE 1673
            HF+EI+ADAPKS KITFDDS+++
Sbjct: 606  HFREIAADAPKSKKITFDDSDED 628


>ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Vitis vinifera]
          Length = 549

 Score =  754 bits (1948), Expect = 0.0
 Identities = 372/443 (83%), Positives = 405/443 (91%)
 Frame = +3

Query: 345  DETVAGGSVAVTGKNAGDAKYAAVKTFGDSGLPENVLECCKGFEKPSPIQSRAWPFLLDG 524
            D+   G  VAVTGK+A ++KYAA K+F +S LP++VLECC+ F +PSPIQS AWPFLLD 
Sbjct: 107  DKESRGACVAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFLLDH 166

Query: 525  RDLIGIAATGSGKTLAFGIPAVMHVLKKRKSKASKGRNPLCLVLSPTRELAQQISDVMCD 704
            RD IGIAATGSGKTLAFG+PA+MHVL KRKSK SKG NPLCLVLSPTRELAQQISDV+C+
Sbjct: 167  RDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDVLCE 226

Query: 705  AGKSCGVESICLYGGTSKGPQISSLKSGIDIVIGTPGRIQDLIEMGFCCLKEVSFVVLDE 884
            AGK CGV+S+CLYGGTSKGPQISSLKSG+DIVIGTPGR++DLIEMG CCL EVSFVVLDE
Sbjct: 227  AGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVVLDE 286

Query: 885  ADRMLDMGFEQVVRSILGQTCSVRQMVMFSATWPLPVHQLAQEFMDPNPVKVVVGSEDLA 1064
            ADRMLDMGFE  VRSIL QTC  RQMVMFSATWPLPVHQLAQEFMDPNPVKVV+GSEDLA
Sbjct: 287  ADRMLDMGFEPEVRSILSQTCPARQMVMFSATWPLPVHQLAQEFMDPNPVKVVIGSEDLA 346

Query: 1065 ANHDVMQIVEVLDDRSRDKRLVTLLEKYHKSQRNRVLVFVLYKMEATRVEKMLQQGGWKV 1244
            ANHDVMQIVEVLDDRSRD+RL+TLL KYHKSQRNRVLVFVLYK EA RVE MLQ+ GW V
Sbjct: 347  ANHDVMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKEAARVENMLQRRGWNV 406

Query: 1245 VSIHGDKSQNDRTKSLSLFKKGSCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHR 1424
            VSIHGDK+Q  RT +LSLFKKGSCPLM+ATDVAARGLDIPDVEVVINYSFPLTTEDYVHR
Sbjct: 407  VSIHGDKAQQARTAALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDYVHR 466

Query: 1425 IGRTGRAGKKGVAHTFFTQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYGA 1604
            IGRTGRAGKKGVAHTFF Q+NKGLAGELVNVL+EAGQIVP  LLKFGTHVKKKESKLYGA
Sbjct: 467  IGRTGRAGKKGVAHTFFMQENKGLAGELVNVLKEAGQIVPADLLKFGTHVKKKESKLYGA 526

Query: 1605 HFKEISADAPKSHKITFDDSEDE 1673
            HF+EI+ADAPKS KITFDDS+++
Sbjct: 527  HFREIAADAPKSKKITFDDSDED 549


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