BLASTX nr result
ID: Glycyrrhiza23_contig00009090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00009090
(251 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631155.1| Pentatricopeptide repeat-containing protein ... 132 4e-29
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi... 115 5e-24
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera] 115 5e-24
ref|XP_002526448.1| pentatricopeptide repeat-containing protein,... 105 3e-21
gb|ABR17838.1| unknown [Picea sitchensis] 98 6e-19
>ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 785
Score = 132 bits (331), Expect = 4e-29
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
VAWNAMIA FSFHAL ++T+ V QMQQAG++PNSST+VS+LPTIGQANAL QGKAIHAY
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY 235
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
+R FF DNVV+ T LLDMYAKC
Sbjct: 236 YIRNFFFDNVVLQTALLDMYAKC 258
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/83 (31%), Positives = 50/83 (60%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
V+++A+I+G + + + + QMQ +GI+P T++++LP AL+ G H Y
Sbjct: 379 VSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGY 438
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
+V + FT++ + ++DMY+KC
Sbjct: 439 TVVRGFTNDTSICNAIIDMYSKC 461
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQA-GISPNSSTVVSVLPTIGQANALRQGKAIHA 177
V W+AMI G+ H S+ + L M G++P +T+ ++L Q L++GK +H
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 178 YSVRKFFTDNVVVGTGLLDMYAKC 249
+ ++ + VG L+ MYAKC
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKC 360
>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 115 bits (287), Expect = 5e-24
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
VAWNAMIAG S + L + +QL++QMQ+ GI PNSST+V VLPT+G+A AL GKA+H Y
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
VR+ F + VVVGTGLLDMYAKC
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKC 258
>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 115 bits (287), Expect = 5e-24
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
VAWNAMIAG S + L + +QL++QMQ+ GI PNSST+V VLPT+G+A AL GKA+H Y
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
VR+ F + VVVGTGLLDMYAKC
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKC 258
>ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534228|gb|EEF35943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 557
Score = 105 bits (263), Expect = 3e-21
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALP-SETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHA 177
VAWN+MIAGFS H + +ET+QL+ QMQ+ + PNSST+V+VLP + QANAL GKA+H
Sbjct: 185 VAWNSMIAGFSLHRVCYNETIQLLAQMQKDLVRPNSSTIVAVLPAVAQANALSHGKALHG 244
Query: 178 YSVRKFFTDNVVVGTGLLDMYAKC 249
+ VR+ + D+VVV TGLLDMY KC
Sbjct: 245 FCVRRGYIDDVVVATGLLDMYGKC 268
Score = 60.8 bits (146), Expect = 1e-07
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
V+++A+I+G + E + + +M+ +G+ P +T+V +LP AL+ G H+Y
Sbjct: 393 VSYSAIISGCMQNGNAKEALSMFHRMRLSGMDPELATMVGILPACAHLAALQHGSCCHSY 452
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
++ K FT + + L+DMYAKC
Sbjct: 453 ALIKGFTSEITICNALIDMYAKC 475
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
V WN +I ++++ +E + L +M + GI P+ T VL A+ +GK IH +
Sbjct: 84 VIWNMLIRAYAWNGPFTEAINLYYKMLELGIQPSKYTYPFVLKACSALQAIEEGKEIHIH 143
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
+ R +V V T ++DMYAKC
Sbjct: 144 AKRLDLDSDVYVSTAVVDMYAKC 166
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 98.2 bits (243), Expect = 6e-19
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
VAWNA+I+G+S H P E + L ++MQ GI P+S +VSVLP AL QGK IH Y
Sbjct: 389 VAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGY 448
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
++R F NVVVGTGL+D+YAKC
Sbjct: 449 TIRSGFESNVVVGTGLVDIYAKC 471
Score = 86.7 bits (213), Expect = 2e-15
Identities = 42/83 (50%), Positives = 56/83 (67%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
V+WNA+IAG+S + P E + L +MQ GI PNSST+VSV+P AL QGK IH Y
Sbjct: 187 VSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCY 246
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
++R +V+V GL++MYAKC
Sbjct: 247 AIRSGIESDVLVVNGLVNMYAKC 269
Score = 80.9 bits (198), Expect = 1e-13
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +1
Query: 4 AWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAYS 183
+WNA+I G+S ++ E + +MQ GI PNS T+VSVLP AL QG+ IH Y+
Sbjct: 289 SWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYA 348
Query: 184 VRKFFTDNVVVGTGLLDMYAKC 249
+R F N VVG L++MYAKC
Sbjct: 349 IRSGFESNDVVGNALVNMYAKC 370
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1
Query: 1 VAWNAMIAGFSFHALPSETMQLVVQMQQAGISPNSSTVVSVLPTIGQANALRQGKAIHAY 180
V W I G+ + ++ ++L QMQ+ GI+P+ +SV+ G + L+ G+ +H
Sbjct: 86 VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHED 145
Query: 181 SVRKFFTDNVVVGTGLLDMYAKC 249
+ + F +V+VGT L MY KC
Sbjct: 146 IIARGFESDVIVGTALASMYTKC 168