BLASTX nr result

ID: Glycyrrhiza23_contig00009086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009086
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239826.1| uncharacterized protein LOC100803110 [Glycin...   439   e-120
gb|AFK43933.1| unknown [Lotus japonicus]                              438   e-120
ref|NP_001242503.1| uncharacterized protein LOC100779162 [Glycin...   411   e-112
ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotei...   388   e-105
ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotei...   387   e-105

>ref|NP_001239826.1| uncharacterized protein LOC100803110 [Glycine max]
            gi|255635750|gb|ACU18224.1| unknown [Glycine max]
          Length = 287

 Score =  439 bits (1128), Expect = e-120
 Identities = 232/287 (80%), Positives = 243/287 (84%), Gaps = 7/287 (2%)
 Frame = +2

Query: 203  MVRLTADLIWKSPHFFNAIKDRELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 382
            MVRLTADLIWKSPHFFN IK+RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN+
Sbjct: 1    MVRLTADLIWKSPHFFNTIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60

Query: 383  PYLNRLGXXXXXXXXXXXXXXXXGEFLPKLHTLVLTNNRIVNLVEIDPLASLTKLQFLSL 562
            PYLNRLG                GEFLP LHTLVLTNNRIVNLVEIDPLASL KL FLSL
Sbjct: 61   PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120

Query: 563  LDNNITKKANYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFASEEVIEEVQRTSVNTIS 742
            LDNNITKK NYRLYVIN LKSLRVLDFKKVKNKERLEAKNLFAS+EVIEE+QRT   T S
Sbjct: 121  LDNNITKKPNYRLYVINNLKSLRVLDFKKVKNKERLEAKNLFASKEVIEEIQRTPAKTFS 180

Query: 743  PGETANVSEAAEELQTPKVAAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 922
             GET NVSEA EE QTPKV APTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADL 
Sbjct: 181  TGETPNVSEAIEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLI 240

Query: 923  SMNDNITLDNVNEKHEDMVH-------GESNDTRDQINNDSTLMEQD 1042
            S++DNI LDNV+EKHEDM+H       G+SNDT++Q N DS  MEQD
Sbjct: 241  SLSDNIMLDNVDEKHEDMIHDDRSQADGKSNDTQEQRNTDSASMEQD 287


>gb|AFK43933.1| unknown [Lotus japonicus]
          Length = 280

 Score =  438 bits (1126), Expect = e-120
 Identities = 229/280 (81%), Positives = 239/280 (85%)
 Frame = +2

Query: 203  MVRLTADLIWKSPHFFNAIKDRELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 382
            MVRLTADLIWKSPHFFNAIK+RELDLRGNKIAVIENLGATEDQFDT+DLSDNEIVKLEN+
Sbjct: 1    MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTLDLSDNEIVKLENI 60

Query: 383  PYLNRLGXXXXXXXXXXXXXXXXGEFLPKLHTLVLTNNRIVNLVEIDPLASLTKLQFLSL 562
            PY NRLG                GEFLP LHTLVLTNNRIVNLVEIDPLASL KLQFLSL
Sbjct: 61   PYRNRLGTLLINNNRVTRINPNIGEFLPSLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL 120

Query: 563  LDNNITKKANYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFASEEVIEEVQRTSVNTIS 742
            LDNNITKK NYRLYVI+KL SLRVLDFKKVKNKERLEAKNLF SEE IE  Q+T V TIS
Sbjct: 121  LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNKERLEAKNLFGSEEAIENAQKTPVKTIS 180

Query: 743  PGETANVSEAAEELQTPKVAAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 922
            P ET +VSEA EE QTPKV APTPEQIIAIKAAIVNSQTLEEVARLEKALKSG LP DLK
Sbjct: 181  PAETPDVSEATEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGLLPEDLK 240

Query: 923  SMNDNITLDNVNEKHEDMVHGESNDTRDQINNDSTLMEQD 1042
            S+N N+TLDNVNEK ED+VH ESNDTR+Q N DS  MEQD
Sbjct: 241  SLNGNVTLDNVNEKGEDVVHDESNDTREQKNTDSAAMEQD 280


>ref|NP_001242503.1| uncharacterized protein LOC100779162 [Glycine max]
            gi|255647036|gb|ACU23986.1| unknown [Glycine max]
          Length = 276

 Score =  411 bits (1056), Expect = e-112
 Identities = 224/287 (78%), Positives = 234/287 (81%), Gaps = 7/287 (2%)
 Frame = +2

Query: 203  MVRLTADLIWKSPHFFNAIKDRELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 382
            MVRLTADLIWKSPHFFNAIK+RELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLEN+
Sbjct: 1    MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV 60

Query: 383  PYLNRLGXXXXXXXXXXXXXXXXGEFLPKLHTLVLTNNRIVNLVEIDPLASLTKLQFLSL 562
            PYLNRLG                GEFLP LHTLVLTNNRIVNLVEIDPLASL KL FLSL
Sbjct: 61   PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL 120

Query: 563  LDNNITKKANYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFASEEVIEEVQRTSVNTIS 742
            LDNNITKK NYRLYVINKLKSLRVLDFKKVKNKERLEAKNLF+S+EVIEE+QRT   +  
Sbjct: 121  LDNNITKKPNYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFSSKEVIEEIQRTPTKS-- 178

Query: 743  PGETANVSEAAEELQTPKVAAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 922
              ET NVSE  EE Q PKV APTPEQIIAIKAAIVN QTLEEVARLEKALKSGQLPADL 
Sbjct: 179  --ETPNVSEVIEEQQMPKVVAPTPEQIIAIKAAIVNFQTLEEVARLEKALKSGQLPADL- 235

Query: 923  SMNDNITLDNVNEKHEDMVH-------GESNDTRDQINNDSTLMEQD 1042
                   LDNV+EKHEDM+H       GESNDT++Q N DS  MEQD
Sbjct: 236  ------LLDNVDEKHEDMIHDDRGQADGESNDTQEQRNTDSASMEQD 276


>ref|XP_002275396.1| PREDICTED: U2 small nuclear ribonucleoprotein A' [Vitis vinifera]
            gi|296085571|emb|CBI29303.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  388 bits (996), Expect = e-105
 Identities = 205/287 (71%), Positives = 229/287 (79%), Gaps = 7/287 (2%)
 Frame = +2

Query: 203  MVRLTADLIWKSPHFFNAIKDRELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 382
            MVRLTADLIWKSPHFFNAI++RELDLRGNK+AVIENLGATEDQFDTIDLSDNEIVKLENL
Sbjct: 1    MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL 60

Query: 383  PYLNRLGXXXXXXXXXXXXXXXXGEFLPKLHTLVLTNNRIVNLVEIDPLASLTKLQFLSL 562
            PYLNRLG                GE+LPKLHTLVLTNNR+VNL EIDPL+S  KLQFLSL
Sbjct: 61   PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL 120

Query: 563  LDNNITKKANYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFASEEVIEEVQRTSVNTIS 742
            LDNNITKK NYRLYVI++LKSLR+LDFKKVKNKERLEA+NLFAS+EV EE ++  + T +
Sbjct: 121  LDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNKERLEAENLFASKEVEEEAKQEPLKTFT 180

Query: 743  PGETANVSEAAEELQTPKVAAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 922
            PGE  N  E AEE Q PKV  P+PE++IAIKAAIVNSQTLEEVARLEKALKSGQLPADLK
Sbjct: 181  PGEMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 240

Query: 923  SMNDNITLDNVNEKHEDMVHGESNDTRD-------QINNDSTLMEQD 1042
            S+ +N   D VNEK + MV    N +RD       Q N+D   MEQ+
Sbjct: 241  SLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVEEQKNDDVAPMEQE 287


>ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Cucumis
            sativus]
          Length = 279

 Score =  387 bits (995), Expect = e-105
 Identities = 203/280 (72%), Positives = 226/280 (80%)
 Frame = +2

Query: 203  MVRLTADLIWKSPHFFNAIKDRELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENL 382
            MVRLT DLIWKSPHFFNAIK+RELDLRGNKIAVIENLGATEDQFD IDLSDNEIVKLEN+
Sbjct: 1    MVRLTVDLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDAIDLSDNEIVKLENM 60

Query: 383  PYLNRLGXXXXXXXXXXXXXXXXGEFLPKLHTLVLTNNRIVNLVEIDPLASLTKLQFLSL 562
            PYLNRLG                GEFLP LHTLVLTNNR+VNLVEIDPLASL+KLQFLSL
Sbjct: 61   PYLNRLGTLLINNNRITRINPNIGEFLPNLHTLVLTNNRLVNLVEIDPLASLSKLQFLSL 120

Query: 563  LDNNITKKANYRLYVINKLKSLRVLDFKKVKNKERLEAKNLFASEEVIEEVQRTSVNTIS 742
            LDNNITKK NYRLYVI+KLKS+RVLDFKKV+NKERLEA+NLF+S+EV EE ++ SV T  
Sbjct: 121  LDNNITKKPNYRLYVIHKLKSVRVLDFKKVRNKERLEARNLFSSKEVEEEAKKESVKTFV 180

Query: 743  PGETANVSEAAEELQTPKVAAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLK 922
            PGE    S+  EE QTP V+APTPEQIIAIKAAIVNSQTLEEVARLE+ALKSGQLPADL 
Sbjct: 181  PGEVEKASKPVEEKQTPNVSAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLN 240

Query: 923  SMNDNITLDNVNEKHEDMVHGESNDTRDQINNDSTLMEQD 1042
             + DN T  N+ +  +D    +S D     N++ST MEQ+
Sbjct: 241  LLEDN-TAQNITKDKDDKTMSDSGDEEHVTNDESTPMEQE 279


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