BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009054
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   238   3e-61
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   225   3e-57
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   223   1e-56
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              201   5e-50
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   201   5e-50

>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/137 (88%), Positives = 128/137 (93%)
 Frame = -3

Query: 413  LTFLWLDCDGNDLDKTTIFLADMICPVLLDTIIQGDPRISSANIIWVTPDTNTWVRNPSK 234
            +TFLW D  G DLD+TT  LADMICPVLL+TIIQGDPRISSA+IIWV P TNTWVRNPSK
Sbjct: 1082 VTFLWPD--GVDLDQTTKVLADMICPVLLETIIQGDPRISSASIIWVNPGTNTWVRNPSK 1139

Query: 233  SSNGELALDIILEKAAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT 54
            SSNGELALD+ILEK AVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGI+CT
Sbjct: 1140 SSNGELALDVILEKEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGIACT 1199

Query: 53   FDQAIQRLAASVKMVAK 3
            FDQAIQRLAASV+MVAK
Sbjct: 1200 FDQAIQRLAASVRMVAK 1216


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score =  225 bits (573), Expect = 3e-57
 Identities = 115/137 (83%), Positives = 122/137 (89%)
 Frame = -3

Query: 413  LTFLWLDCDGNDLDKTTIFLADMICPVLLDTIIQGDPRISSANIIWVTPDTNTWVRNPSK 234
            LTF WL    +DLD     LA+ ICPVL  TIIQGDPRISSA+IIWV+PDTNTWVRNP K
Sbjct: 1022 LTF-WLKNYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYK 1080

Query: 233  SSNGELALDIILEKAAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT 54
            SSNGELALDIILEK AVKQSGDAWR+VLD+CLPVLHLIDTRRSIPYAIKQIQELLGISCT
Sbjct: 1081 SSNGELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCT 1140

Query: 53   FDQAIQRLAASVKMVAK 3
            FDQAIQR+AASVKMVAK
Sbjct: 1141 FDQAIQRVAASVKMVAK 1157


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  223 bits (569), Expect = 1e-56
 Identities = 113/137 (82%), Positives = 123/137 (89%)
 Frame = -3

Query: 413  LTFLWLDCDGNDLDKTTIFLADMICPVLLDTIIQGDPRISSANIIWVTPDTNTWVRNPSK 234
            LTF WL    +DLD     L++ ICPVL +TII+GDPRISSA+IIWV+PDTNTWVRNP K
Sbjct: 1006 LTF-WLKNHDSDLDNAVKVLSENICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYK 1064

Query: 233  SSNGELALDIILEKAAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT 54
            SSNGELALDI+LE+ AVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT
Sbjct: 1065 SSNGELALDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT 1124

Query: 53   FDQAIQRLAASVKMVAK 3
            FDQAIQR+AASVKMVAK
Sbjct: 1125 FDQAIQRVAASVKMVAK 1141


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  201 bits (511), Expect = 5e-50
 Identities = 97/137 (70%), Positives = 112/137 (81%)
 Frame = -3

Query: 413  LTFLWLDCDGNDLDKTTIFLADMICPVLLDTIIQGDPRISSANIIWVTPDTNTWVRNPSK 234
            L F W     ++L++    LA  ICPVLL TII+GD R+ + NIIW++PDT TW+RNP K
Sbjct: 1068 LLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCK 1127

Query: 233  SSNGELALDIILEKAAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT 54
            S  GELALDI+LEKAAVKQ GDAWRIVLD+CLPVLHLIDTRRSIPYAIKQ+QELLGISC 
Sbjct: 1128 SRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCA 1187

Query: 53   FDQAIQRLAASVKMVAK 3
            FDQA+QRL+ SV MVAK
Sbjct: 1188 FDQAVQRLSKSVTMVAK 1204


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  201 bits (511), Expect = 5e-50
 Identities = 97/137 (70%), Positives = 112/137 (81%)
 Frame = -3

Query: 413  LTFLWLDCDGNDLDKTTIFLADMICPVLLDTIIQGDPRISSANIIWVTPDTNTWVRNPSK 234
            L F W     ++L++    LA  ICPVLL TII+GD R+ + NIIW++PDT TW+RNP K
Sbjct: 1008 LLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCK 1067

Query: 233  SSNGELALDIILEKAAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCT 54
            S  GELALDI+LEKAAVKQ GDAWRIVLD+CLPVLHLIDTRRSIPYAIKQ+QELLGISC 
Sbjct: 1068 SRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCA 1127

Query: 53   FDQAIQRLAASVKMVAK 3
            FDQA+QRL+ SV MVAK
Sbjct: 1128 FDQAVQRLSKSVTMVAK 1144