BLASTX nr result

ID: Glycyrrhiza23_contig00009042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009042
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus ...   469   e-130
ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus ...   466   e-129
ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   463   e-128
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   462   e-128
ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [...   462   e-128

>ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
            gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4,
            putative [Ricinus communis]
          Length = 263

 Score =  469 bits (1206), Expect = e-130
 Identities = 232/256 (90%), Positives = 237/256 (92%)
 Frame = -2

Query: 1080 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 901
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 900  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 721
            VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK
Sbjct: 61   VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 720  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXX 541
            FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFD    
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 540  XXXXXXXXXXXXXVLKNREKHKGSFETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPK 361
                         V+KNREKHKGSFET+H+QDATGHEFATR+ NVFTIGKGTKPWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPK 240

Query: 360  GRGIKLSIIEEARKRL 313
            G+GIKLSIIEEARKRL
Sbjct: 241  GKGIKLSIIEEARKRL 256


>ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus communis]
            gi|223548678|gb|EEF50169.1| 40S ribosomal protein S4,
            putative [Ricinus communis]
          Length = 263

 Score =  466 bits (1200), Expect = e-129
 Identities = 231/256 (90%), Positives = 237/256 (92%)
 Frame = -2

Query: 1080 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 901
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 900  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 721
            VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK
Sbjct: 61   VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 720  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXX 541
            FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE NKIT+FIKFD    
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITEFIKFDVGNV 180

Query: 540  XXXXXXXXXXXXXVLKNREKHKGSFETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPK 361
                         V+KNREKHKGSFET+HIQD+TGHEFATR+ NVFTIGKGTKPWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRMGNVFTIGKGTKPWVSLPK 240

Query: 360  GRGIKLSIIEEARKRL 313
            G+GIKLSIIEEARKRL
Sbjct: 241  GKGIKLSIIEEARKRL 256


>ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  463 bits (1192), Expect = e-128
 Identities = 230/256 (89%), Positives = 236/256 (92%)
 Frame = -2

Query: 1080 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 901
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 900  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 721
            VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSIRD+EAK
Sbjct: 61   VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 720  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXX 541
            FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE NKI DFIKFD    
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 540  XXXXXXXXXXXXXVLKNREKHKGSFETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPK 361
                         V+KNREKHKGSFET+HIQDATGHEFATRL NVFTIGKGTKPWVSLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 360  GRGIKLSIIEEARKRL 313
            G+GIKL+IIEEARKRL
Sbjct: 241  GKGIKLTIIEEARKRL 256


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  462 bits (1189), Expect = e-128
 Identities = 226/256 (88%), Positives = 235/256 (91%)
 Frame = -2

Query: 1080 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 901
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 900  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 721
            VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDDEAK
Sbjct: 61   VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 720  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXX 541
            FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI+ANDTIKLDLE NKI DFIKFD    
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 540  XXXXXXXXXXXXXVLKNREKHKGSFETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPK 361
                         V+KNREKHKGSFET+H+QDATGHEFATR+ NVFTIGKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 360  GRGIKLSIIEEARKRL 313
            G+GIKLSIIEEARKR+
Sbjct: 241  GKGIKLSIIEEARKRI 256


>ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  462 bits (1189), Expect = e-128
 Identities = 226/256 (88%), Positives = 235/256 (91%)
 Frame = -2

Query: 1080 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 901
            MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 900  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 721
            VIAILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK
Sbjct: 61   VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 720  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXX 541
            FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI+ANDT+KLDLE NKI DFIKFD    
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNV 180

Query: 540  XXXXXXXXXXXXXVLKNREKHKGSFETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPK 361
                         V+KNREKHKGSFET+H+QDATGHEFATR+ NVFTIGKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 360  GRGIKLSIIEEARKRL 313
            G+GIKLSIIEEARKR+
Sbjct: 241  GKGIKLSIIEEARKRI 256


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