BLASTX nr result

ID: Glycyrrhiza23_contig00009010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00009010
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [G...   422   e-115
ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatu...   334   3e-89
gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]     334   3e-89
ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [G...   302   1e-79
ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [G...   294   5e-77

>ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 517

 Score =  422 bits (1084), Expect = e-115
 Identities = 248/374 (66%), Positives = 263/374 (70%), Gaps = 22/374 (5%)
 Frame = +3

Query: 465  NHCVPDFDTQMD-DQDYPI---SGLPRPKKPSIADDDIMELFWQNGQVVMQSQNHRPLRK 632
            NHCVPDFD QMD D +YPI   S LPR KKPSIADDDIMEL W NGQVV+QSQN R LRK
Sbjct: 6    NHCVPDFDIQMDHDHEYPILTPSALPRQKKPSIADDDIMELLWHNGQVVVQSQNQRSLRK 65

Query: 633  PPPARNSDDATP---SSARDTRPEEENHNQYLFMQEGEMASWLHYPIDDDVPPPLDQSFC 803
             PP  NS DA+P   S  R+ RP  EN NQ+LFM EGEMASWLHYPIDDD  P LDQSF 
Sbjct: 66   LPPVTNSHDASPAGPSMTREIRPLVENFNQHLFMHEGEMASWLHYPIDDD-EPALDQSFG 124

Query: 804  ADFLYPSPLPPTVNNNNSAMQTPARTSQLTELRHPSTSAAXXXXXXXXXXXHEQATPNFA 983
            ADFLY    PPT  NN+S MQT   TSQLTELR  S   A            EQ TPNFA
Sbjct: 125  ADFLYS---PPTTANNSSFMQTLGHTSQLTELRPMS---ANPRPPIPPPRRPEQRTPNFA 178

Query: 984  YFSRHNSVRAKPGPSSVPRTTARESTVVDSCDTPAAPPPQAVSETARSSAEPTEGAGGVA 1163
            YFSRHN+  A+P      +  ARESTVVDSCDT AA     VSET RS+AE   G  GVA
Sbjct: 179  YFSRHNTRAAEPSV----KAAARESTVVDSCDTEAAA--SRVSETVRSAAE---GGAGVA 229

Query: 1164 GPSTTF--------------DEPXXXXXXXEPVQ-KAAEEDRKRKGREAEEWDWQSEDID 1298
             PST+                 P       EPVQ  AAEEDRKRKGREAEEW+ QSED+D
Sbjct: 230  APSTSAGGGRSTMMYDLTMTSSPGGSSSCDEPVQVAAAEEDRKRKGREAEEWECQSEDVD 289

Query: 1299 FESAEARKNVCGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLD 1478
            FES EA+K VCGSTSTKRSRAAEVHNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLD
Sbjct: 290  FES-EAKKQVCGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLD 348

Query: 1479 EAIEYLKSLQLQVQ 1520
            EAI YLKSLQLQVQ
Sbjct: 349  EAISYLKSLQLQVQ 362


>ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
            gi|355500490|gb|AES81693.1| Transcription factor PIF1
            [Medicago truncatula]
          Length = 467

 Score =  334 bits (857), Expect = 3e-89
 Identities = 204/355 (57%), Positives = 229/355 (64%), Gaps = 3/355 (0%)
 Frame = +3

Query: 465  NHCVPDFDTQMDDQDYPISGLPRPKKPSIADDDIMELFWQNGQVVMQSQNHRPLRKPPPA 644
            N+CV  F +QMD Q      LPRPKKP IADD+IMEL WQNGQVV Q  NHR  +KPP  
Sbjct: 3    NYCVSYFQSQMDQQR-----LPRPKKPIIADDEIMELLWQNGQVVTQRPNHRHAKKPPSC 57

Query: 645  RNSDDATPSSARDTRPEEENHNQYLFMQEGEMASWLHYPIDDDVPPPLDQSFCADFLYPS 824
            + +     +S        EN+NQYLFMQE EMASWLHY  DD    P D++F  D+L   
Sbjct: 58   QETTRGGGASP------VENYNQYLFMQENEMASWLHY--DDS---PFDRTFSTDYLNT- 105

Query: 825  PLPPTVNNNNSAMQTPARTSQLTELRHPSTSAAXXXXXXXXXXXHEQA-TPNFAYFSRHN 1001
              PP   NNNS++QTP            S   +           H Q  TPNFA   +H 
Sbjct: 106  --PPATANNNSSIQTPT-----------SVVPSRPPIPPPRRMGHVQPETPNFA---KHG 149

Query: 1002 SVRAKPGPSSVPRTTARESTVVDSCDTPAAPPPQAVSETARSSAEPTEGAGGVAGPSTTF 1181
                      V  T  RESTVVDSCDTPA  P  A SET +S A+ TEG   VA  STTF
Sbjct: 150  ----------VMNTAVRESTVVDSCDTPAVMPA-AFSETVKSLADQTEGDTEVAVVSTTF 198

Query: 1182 DEPXXXXXXXEP--VQKAAEEDRKRKGREAEEWDWQSEDIDFESAEARKNVCGSTSTKRS 1355
            DEP       EP  V K AE+DRKRKG EAEEW++QSED+DFESAEA+KN+ GS STKRS
Sbjct: 199  DEPGGSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAKKNISGS-STKRS 257

Query: 1356 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 1520
            RAAEVHNLSERRRRDRINEKM+ALQELIPR NKSDKASMLDEAI+YLKSLQLQVQ
Sbjct: 258  RAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQ 312


>gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 484

 Score =  334 bits (857), Expect = 3e-89
 Identities = 204/355 (57%), Positives = 229/355 (64%), Gaps = 3/355 (0%)
 Frame = +3

Query: 465  NHCVPDFDTQMDDQDYPISGLPRPKKPSIADDDIMELFWQNGQVVMQSQNHRPLRKPPPA 644
            N+CV  F +QMD Q      LPRPKKP IADD+IMEL WQNGQVV Q  NHR  +KPP  
Sbjct: 3    NYCVSYFQSQMDQQR-----LPRPKKPIIADDEIMELLWQNGQVVTQRPNHRHAKKPPSC 57

Query: 645  RNSDDATPSSARDTRPEEENHNQYLFMQEGEMASWLHYPIDDDVPPPLDQSFCADFLYPS 824
            + +     +S        EN+NQYLFMQE EMASWLHY  DD    P D++F  D+L   
Sbjct: 58   QETTRGGGASP------VENYNQYLFMQENEMASWLHY--DDS---PFDRTFSTDYLNT- 105

Query: 825  PLPPTVNNNNSAMQTPARTSQLTELRHPSTSAAXXXXXXXXXXXHEQA-TPNFAYFSRHN 1001
              PP   NNNS++QTP            S   +           H Q  TPNFA   +H 
Sbjct: 106  --PPATANNNSSIQTPT-----------SVVPSRPPIPPPRRMGHVQPETPNFA---KHG 149

Query: 1002 SVRAKPGPSSVPRTTARESTVVDSCDTPAAPPPQAVSETARSSAEPTEGAGGVAGPSTTF 1181
                      V  T  RESTVVDSCDTPA  P  A SET +S A+ TEG   VA  STTF
Sbjct: 150  ----------VMNTAVRESTVVDSCDTPAVMPA-AFSETVKSLADQTEGDTEVAVVSTTF 198

Query: 1182 DEPXXXXXXXEP--VQKAAEEDRKRKGREAEEWDWQSEDIDFESAEARKNVCGSTSTKRS 1355
            DEP       EP  V K AE+DRKRKG EAEEW++QSED+DFESAEA+KN+ GS STKRS
Sbjct: 199  DEPGGSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAKKNISGS-STKRS 257

Query: 1356 RAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 1520
            RAAEVHNLSERRRRDRINEKM+ALQELIPR NKSDKASMLDEAI+YLKSLQLQVQ
Sbjct: 258  RAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQ 312


>ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 491

 Score =  302 bits (774), Expect = 1e-79
 Identities = 183/350 (52%), Positives = 212/350 (60%), Gaps = 9/350 (2%)
 Frame = +3

Query: 498  DDQDYPISGLPRPKKPSIADDDIMELFWQNGQVVMQSQNHRPLRKPPPARNSDDATPSSA 677
            DD++YPI   P  KKPS  +D+IMEL WQNGQVVMQ+QN RP RK PP  + D   P  A
Sbjct: 4    DDEEYPI---PVSKKPSTQNDEIMELLWQNGQVVMQNQNQRPFRKQPPTTDGDGPIP--A 58

Query: 678  RDTRPEE-ENHN-QYLFMQEGEMASWLHYPIDDDVPPPLDQSFCADFLYPSPLPPTVNNN 851
            R+ R  E EN+N Q+LFMQE EMASWLHYPI +D PP     FCAD LYP P      N 
Sbjct: 59   REIRSSEAENYNSQHLFMQEDEMASWLHYPIHEDPPPFDHHDFCADILYPPPNATASQNQ 118

Query: 852  NSA-MQTPARTSQLTELRHPSTSAAXXXXXXXXXXXHEQATPNFAYFSRHN--SVRAKPG 1022
            +SA +Q+  RT   TEL+HP+                     NF +F++H   S  +K  
Sbjct: 119  SSASVQSSVRT---TELQHPAPRPPIPPPRRQEHTLSR--IHNFTHFAKHGNASSSSKAA 173

Query: 1023 PSSVPRTTARESTVVDSCDTPAA----PPPQAVSETARSSAEPTEGAGGVAGPSTTFDEP 1190
              + P     E          AA    P      ETA      T   GG +G +      
Sbjct: 174  APAQPTVATAEHVETGRASVSAAAGKTPASDGGRETATCDVTVTSSPGGSSGSA------ 227

Query: 1191 XXXXXXXEPVQKAAEEDRKRKGREAEEWDWQSEDIDFESAEARKNVCGSTSTKRSRAAEV 1370
                   EPVQ+    +RKRKGRE EE ++QSED+DFES EA+K V GSTSTKRS AAEV
Sbjct: 228  -------EPVQREPVVNRKRKGREQEESEYQSEDVDFESPEAKKQVRGSTSTKRSHAAEV 280

Query: 1371 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 1520
            HNLSERRRRDRINEKM+ALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ
Sbjct: 281  HNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQ 330


>ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
          Length = 476

 Score =  294 bits (752), Expect = 5e-77
 Identities = 177/328 (53%), Positives = 206/328 (62%), Gaps = 10/328 (3%)
 Frame = +3

Query: 567  MELFWQNGQVVMQSQNHRPLRKPP--PARNSDDATPSSARDTRPEEENHN--QYLFMQEG 734
            MEL WQNGQVVMQSQN RP RKPP  P  N  D   S+      E EN+N  Q+LFMQE 
Sbjct: 1    MELLWQNGQVVMQSQNQRPFRKPPQPPEANGGDGAISAREIRSSEAENYNNSQHLFMQED 60

Query: 735  EMASWLHYPIDDDVPPPLDQSFCADFLYPSP-LPPTVNNNNSAMQTPARTSQLTELRHPS 911
            EMA+WLHYPI +D PP     F AD  YP P    + N  ++A+Q+  RT   TEL HP 
Sbjct: 61   EMAAWLHYPIHEDPPPFDHHDFGADIFYPPPNATASQNRGSAAVQSSFRT---TELWHP- 116

Query: 912  TSAAXXXXXXXXXXXHEQAT-PNFAYFSRHNSVRAKPGPSSVPRTTARESTVVDSCDTPA 1088
              A            H  +   NFA+F++H +       SS     A + TVVDSC+TP 
Sbjct: 117  --APRPPIPPPRRPEHAPSRIHNFAHFTKHGNAS-----SSSKAAAAAQPTVVDSCETPV 169

Query: 1089 APPPQAVSETARSSAEPTEGAGGVAGPST----TFDEPXXXXXXXEPVQKAAEEDRKRKG 1256
            A    A +  AR++A  T  + G    +T        P       EPV++    DRKRKG
Sbjct: 170  ATAEHAETGRARAAAGKTAVSDGGRETATCDVTVTSSPGDSSGSAEPVEREPMADRKRKG 229

Query: 1257 REAEEWDWQSEDIDFESAEARKNVCGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQEL 1436
            RE EE ++QSED+DFES EA+K V GSTSTKRSRAAEVHNLSERRRRDRINEKM+ALQEL
Sbjct: 230  REHEESEFQSEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQEL 289

Query: 1437 IPRCNKSDKASMLDEAIEYLKSLQLQVQ 1520
            IPRCNKSDKASMLDEAIEYLKSLQLQVQ
Sbjct: 290  IPRCNKSDKASMLDEAIEYLKSLQLQVQ 317


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