BLASTX nr result

ID: Glycyrrhiza23_contig00008999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008999
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518169.1| PREDICTED: uncharacterized protein LOC100789...   110   7e-22
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...   103   5e-20
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...   102   2e-19
ref|XP_003524344.1| PREDICTED: uncharacterized protein LOC100802...   101   3e-19
ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula...   100   7e-19

>ref|XP_003518169.1| PREDICTED: uncharacterized protein LOC100789987 [Glycine max]
          Length = 484

 Score =  110 bits (274), Expect = 7e-22
 Identities = 73/142 (51%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
 Frame = -1

Query: 843 YAEMIYTAIEALKEKNGSSKRAIAKYIEQVYKEQLPPTHSALLTHHLKRLKTNGMLVMVK 664
           YAEMIYTAIEALKEK+GSSKRAIAKYIEQVY  QLPP HS LLT HL  LK+ G+L MVK
Sbjct: 226 YAEMIYTAIEALKEKDGSSKRAIAKYIEQVY-TQLPPNHSNLLTQHLTHLKSRGLLQMVK 284

Query: 663 KSYKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKAQPQP---EAQAQNVPL-GDATN 496
           KSY L                               + + +P   +   QN PL  D  N
Sbjct: 285 KSYGLPRSVPVSIPGPAPTEGTSVVPAAVVAITTTPRPRGRPHKAQNPVQNSPLPQDIVN 344

Query: 495 AXXXXXXQNAEPVWAALGLADE 430
                  QNAEPVW ALGLADE
Sbjct: 345 V---QVQQNAEPVWTALGLADE 363


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score =  103 bits (258), Expect = 5e-20
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 843 YAEMIYTAIEALKEKNGSSKRAIAKYIEQVYKEQLPPTHSALLTHHLKRLKTNGMLVMVK 664
           Y EMIYTAI ALKEK+GSSKRAI KY+EQVYK+ LPPTHSALLTHHL RLK+ G+L++VK
Sbjct: 37  YDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKD-LPPTHSALLTHHLNRLKSAGLLILVK 95

Query: 663 KSYKL 649
           KSYKL
Sbjct: 96  KSYKL 100


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score =  102 bits (253), Expect = 2e-19
 Identities = 52/65 (80%), Positives = 57/65 (87%)
 Frame = -1

Query: 843 YAEMIYTAIEALKEKNGSSKRAIAKYIEQVYKEQLPPTHSALLTHHLKRLKTNGMLVMVK 664
           Y +MIY AI ALKE++GSSKRAIAKYIE+VY   LPPTHSALLTHHLKRLK  G+LVMVK
Sbjct: 72  YTDMIYAAITALKERDGSSKRAIAKYIERVYPG-LPPTHSALLTHHLKRLKNTGLLVMVK 130

Query: 663 KSYKL 649
           KSYKL
Sbjct: 131 KSYKL 135


>ref|XP_003524344.1| PREDICTED: uncharacterized protein LOC100802941 [Glycine max]
          Length = 383

 Score =  101 bits (251), Expect = 3e-19
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -1

Query: 843 YAEMIYTAIEALKEKNGSSKRAIAKYIEQVYKEQLPPTHSALLTHHLKRLKTNGMLVMVK 664
           Y EMIYTAI ALKE++GSSKRAI KYIEQVYK+ LPPTH ALLTHHL RLK++ +LV+VK
Sbjct: 12  YDEMIYTAIGALKERDGSSKRAIGKYIEQVYKD-LPPTHPALLTHHLNRLKSSALLVLVK 70

Query: 663 KSYKL 649
           KSYKL
Sbjct: 71  KSYKL 75


>ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula]
           gi|92870991|gb|ABE80152.1| High mobility group proteins
           HMG-I and HMG-Y; Linker histone, N-terminal [Medicago
           truncatula] gi|355525109|gb|AET05563.1| HMG-Y-related
           protein A [Medicago truncatula]
          Length = 422

 Score =  100 bits (248), Expect = 7e-19
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = -1

Query: 843 YAEMIYTAIEALKEKNGSSKRAIAKYIEQVYKEQLPPTHSALLTHHLKRLKTNGMLVMVK 664
           YAEMIY AIEALKEK+GSSKRAI KYIE VYK+ LPP HS LLT HL  LK+ G+L+M K
Sbjct: 30  YAEMIYKAIEALKEKDGSSKRAIGKYIEHVYKQVLPPEHSTLLTQHLNHLKSAGLLIMFK 89

Query: 663 KSYKL 649
           KSYKL
Sbjct: 90  KSYKL 94


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