BLASTX nr result

ID: Glycyrrhiza23_contig00008995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008995
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34761.1| unknown [Lotus japonicus]                              401   e-109
ref|XP_003552362.1| PREDICTED: 50S ribosomal protein L22, chloro...   381   e-103
gb|AFK34292.1| unknown [Medicago truncatula]                          374   e-101
ref|XP_003589828.1| 50S ribosomal protein L22 [Medicago truncatu...   374   e-101
ref|XP_003533624.1| PREDICTED: 50S ribosomal protein L22, chloro...   340   4e-93

>gb|AFK34761.1| unknown [Lotus japonicus]
          Length = 273

 Score =  401 bits (1031), Expect = e-109
 Identities = 204/273 (74%), Positives = 225/273 (82%)
 Frame = +1

Query: 163 MVQWQRHFFPILRHIHKRVDHVNHSATSLVIXXXXXXXXXXXXXXTWTTPLPSNSRPFFH 342
           MVQWQRH FPILRHIHK VDHV HSA  L I               WTT  PS S P +H
Sbjct: 1   MVQWQRHIFPILRHIHKGVDHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISMPMYH 60

Query: 343 CFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIK 522
           CFQ Q ISSST LL NS EETPVSSPLA +S+LGSSK EDQNQK V+KPE VQAVLK IK
Sbjct: 61  CFQHQGISSSTWLLANSPEETPVSSPLAPLSLLGSSKGEDQNQKAVSKPENVQAVLKGIK 120

Query: 523 QSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIV 702
           QSPKKVNLV ALVRGMLVKDAL+QLQ+TVKRAAKTVYQVIHSARANASHN GLD +RLI+
Sbjct: 121 QSPKKVNLVVALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNRGLDSDRLII 180

Query: 703 DEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTK 882
            EA+VGKGF+KKR++ H K R GI+HRPECRLTVVVREITPEEEAKIARL+VHN++KL+K
Sbjct: 181 AEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLSK 240

Query: 883 REKRLVPHQLIETNPVWGRKSKSSDQNSSAAVA 981
           RE+RLVPH+LIET PVWGRK+K + QNS AAVA
Sbjct: 241 RERRLVPHKLIETTPVWGRKNKPTSQNSGAAVA 273


>ref|XP_003552362.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Glycine
           max]
          Length = 277

 Score =  381 bits (979), Expect = e-103
 Identities = 206/277 (74%), Positives = 223/277 (80%), Gaps = 4/277 (1%)
 Frame = +1

Query: 163 MVQWQRHFFPILRHIHKRV--DHVNHSATSLVIXXXXXXXXXXXXXX-TWTTP-LPSNSR 330
           MVQW RH FP LRHIHKRV      HSA SLVI               TWTT  LP  SR
Sbjct: 1   MVQWHRHVFPFLRHIHKRVLEPQATHSAPSLVISRLASSLSQGQLGRRTWTTTTLPCFSR 60

Query: 331 PFFHCFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVL 510
           P F  FQ Q ISSS QLL NSSEETPV SPLA VS+L SSK EDQ QKVVTKPEKVQA+L
Sbjct: 61  PVFLTFQHQGISSSAQLLANSSEETPVLSPLAPVSLLSSSKGEDQKQKVVTKPEKVQAIL 120

Query: 511 KKIKQSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPE 690
           K IKQSPKKVNLVAALVRGMLVKDALMQL++T+KRAAKTVYQVIHSARANASHNHGLDPE
Sbjct: 121 KAIKQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPE 180

Query: 691 RLIVDEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYR 870
           RLIV EAFVGKGF+KKR+  HAK +S +  RPECRLTVVVREIT EEEA+IARLRVHN++
Sbjct: 181 RLIVAEAFVGKGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFK 240

Query: 871 KLTKREKRLVPHQLIETNPVWGRKSKSSDQNSSAAVA 981
           +LTKR+KRLVPHQLIE+NP+WGRK+KSS QN SA  A
Sbjct: 241 RLTKRQKRLVPHQLIESNPIWGRKNKSSGQNLSATPA 277


>gb|AFK34292.1| unknown [Medicago truncatula]
          Length = 285

 Score =  374 bits (959), Expect = e-101
 Identities = 192/272 (70%), Positives = 220/272 (80%)
 Frame = +1

Query: 163 MVQWQRHFFPILRHIHKRVDHVNHSATSLVIXXXXXXXXXXXXXXTWTTPLPSNSRPFFH 342
           MVQWQRH FPILR IHK ++  NHSAT+L +               W+  +PS SRPF H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 343 CFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIK 522
            FQ Q ISSSTQLLKNSSEE P+SSPL  VS  GSS+ ++QN+K     +KVQA+LKKIK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 523 QSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIV 702
           QSPKKVNLVAALVRGMLVKDAL+QLQV VKRA+KTVYQVIHSARANASHNHGL+ +RLIV
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 703 DEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTK 882
            EAFVGKG FKKR++ H K RSGI+HRPECRLTVV+REITPEEEA+IARL+VHN++KLTK
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 883 REKRLVPHQLIETNPVWGRKSKSSDQNSSAAV 978
           +E RLVPHQLIET PVWGRK+KSS QN +  V
Sbjct: 237 KEGRLVPHQLIETTPVWGRKNKSSSQNETTPV 268


>ref|XP_003589828.1| 50S ribosomal protein L22 [Medicago truncatula]
           gi|355478876|gb|AES60079.1| 50S ribosomal protein L22
           [Medicago truncatula]
          Length = 326

 Score =  374 bits (959), Expect = e-101
 Identities = 192/272 (70%), Positives = 220/272 (80%)
 Frame = +1

Query: 163 MVQWQRHFFPILRHIHKRVDHVNHSATSLVIXXXXXXXXXXXXXXTWTTPLPSNSRPFFH 342
           MVQWQRH FPILR IHK ++  NHSAT+L +               W+  +PS SRPF H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 343 CFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIK 522
            FQ Q ISSSTQLLKNSSEE P+SSPL  VS  GSS+ ++QN+K     +KVQA+LKKIK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 523 QSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIV 702
           QSPKKVNLVAALVRGMLVKDAL+QLQV VKRA+KTVYQVIHSARANASHNHGL+ +RLIV
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 703 DEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTK 882
            EAFVGKG FKKR++ H K RSGI+HRPECRLTVV+REITPEEEA+IARL+VHN++KLTK
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 883 REKRLVPHQLIETNPVWGRKSKSSDQNSSAAV 978
           +E RLVPHQLIET PVWGRK+KSS QN +  V
Sbjct: 237 KEGRLVPHQLIETTPVWGRKNKSSSQNETTPV 268


>ref|XP_003533624.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Glycine
           max]
          Length = 292

 Score =  340 bits (871), Expect(2) = 4e-93
 Identities = 186/255 (72%), Positives = 203/255 (79%), Gaps = 2/255 (0%)
 Frame = +1

Query: 223 HVNHSATSLVIXXXXXXXXXXXXXX-TWTTP-LPSNSRPFFHCFQLQRISSSTQLLKNSS 396
           H  HSA SLVI               TWTT  LP  SRP F   Q Q ISSS  LL NSS
Sbjct: 38  HATHSAPSLVISRLASSLSQVQLGRRTWTTTTLPCFSRPIFLGSQHQGISSSANLLANSS 97

Query: 397 EETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIKQSPKKVNLVAALVRGMLV 576
           EETPV SPL  VS+LGSSK EDQ QKVVTK EKVQAVLK IKQSPKKVNLVAALVRGMLV
Sbjct: 98  EETPVLSPLVPVSLLGSSKGEDQKQKVVTKQEKVQAVLKAIKQSPKKVNLVAALVRGMLV 157

Query: 577 KDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIVDEAFVGKGFFKKRMAYHA 756
           KDALMQL++T+KRAAKTVYQVIHSARANASHNHGLDPERLIV EAFVGKGF+KKR+  HA
Sbjct: 158 KDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPERLIVAEAFVGKGFYKKRLWPHA 217

Query: 757 KHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTKREKRLVPHQLIETNPVWG 936
           K +S +  RPECRLTVVVREIT EEEA+IARLRVHN++K TKR++RLVPHQLI +NP+WG
Sbjct: 218 KGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFKKRTKRQQRLVPHQLIVSNPIWG 277

Query: 937 RKSKSSDQNSSAAVA 981
           RK+KSS +N SA  A
Sbjct: 278 RKNKSSGKNLSATPA 292



 Score = 29.6 bits (65), Expect(2) = 4e-93
 Identities = 16/21 (76%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +3

Query: 165 GAMAETFFPNSSSHSQA-SGP 224
           GA+AET FP SS HSQA SGP
Sbjct: 17  GAVAETRFPLSSPHSQASSGP 37


Top