BLASTX nr result

ID: Glycyrrhiza23_contig00008965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008965
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-li...   135   3e-30
ref|XP_003522157.1| PREDICTED: GDP-mannose transporter GONST3-li...   135   5e-30
ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula...   131   5e-29
ref|XP_003592258.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mann...   126   2e-27
ref|XP_002889076.1| integral membrane family protein [Arabidopsi...   120   1e-25

>ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]
          Length = 382

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/104 (69%), Positives = 78/104 (75%)
 Frame = -2

Query: 312 MSNDNDVEKNPTNNLSVQKXXXXXXXXXXXXXXXXXXGTWYNSVMHQISVYGVAAGYCLS 133
           MS + DVE NP+NNL+VQK                    WY S++HQISVYGVAAGYCLS
Sbjct: 1   MSKETDVE-NPSNNLTVQKGVDVKEDVSVNVSDSEG--NWYTSLVHQISVYGVAAGYCLS 57

Query: 132 ASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFLCGRLKLVEH 1
           ASLLSIINKWAVMKFPYPGALTALQYFTSAAGV L GRLKL+EH
Sbjct: 58  ASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGRLKLLEH 101


>ref|XP_003522157.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]
          Length = 457

 Score =  135 bits (339), Expect = 5e-30
 Identities = 71/106 (66%), Positives = 79/106 (74%)
 Frame = -2

Query: 318 ILMSNDNDVEKNPTNNLSVQKXXXXXXXXXXXXXXXXXXGTWYNSVMHQISVYGVAAGYC 139
           ++MS + DVE NP+NN +VQK                    WY S++HQISVYGVAAGYC
Sbjct: 80  LMMSKETDVE-NPSNNPTVQKGVDVNVSDDEG--------NWYTSLVHQISVYGVAAGYC 130

Query: 138 LSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFLCGRLKLVEH 1
           LSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFL GR KL+EH
Sbjct: 131 LSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFLFGRFKLLEH 176


>ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula]
           gi|355505842|gb|AES86984.1| GDP-mannose transporter
           [Medicago truncatula]
          Length = 650

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/98 (67%), Positives = 73/98 (74%)
 Frame = -2

Query: 294 VEKNPTNNLSVQKXXXXXXXXXXXXXXXXXXGTWYNSVMHQISVYGVAAGYCLSASLLSI 115
           VEKNPT+N++V                      WY S++HQ+SVYGVAAGYCLSASLLSI
Sbjct: 200 VEKNPTSNMNVNDGVAG---------------NWYTSIVHQVSVYGVAAGYCLSASLLSI 244

Query: 114 INKWAVMKFPYPGALTALQYFTSAAGVFLCGRLKLVEH 1
           INKWAVMKFPYPGALTALQYFTSAAGV LCG LK+VEH
Sbjct: 245 INKWAVMKFPYPGALTALQYFTSAAGVLLCGWLKVVEH 282


>ref|XP_003592258.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
           [Medicago truncatula] gi|355481306|gb|AES62509.1|
           UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose
           transporter [Medicago truncatula]
          Length = 404

 Score =  126 bits (317), Expect = 2e-27
 Identities = 65/98 (66%), Positives = 71/98 (72%)
 Frame = -2

Query: 294 VEKNPTNNLSVQKXXXXXXXXXXXXXXXXXXGTWYNSVMHQISVYGVAAGYCLSASLLSI 115
           VEKNPT+N+                      G WY S++H ISVYGVAAGYCLSASLLSI
Sbjct: 35  VEKNPTSNVK--------NLNMNVNENDSVAGNWYTSIVHNISVYGVAAGYCLSASLLSI 86

Query: 114 INKWAVMKFPYPGALTALQYFTSAAGVFLCGRLKLVEH 1
           INKWA+MKFPYPGALTALQYFTSAAGV LCG LK+VEH
Sbjct: 87  INKWAIMKFPYPGALTALQYFTSAAGVLLCGWLKVVEH 124


>ref|XP_002889076.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334917|gb|EFH65335.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/66 (81%), Positives = 61/66 (92%)
 Frame = -2

Query: 198 TWYNSVMHQISVYGVAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFLCGR 19
           TWY+  + Q SVYGVAAGYCLSASLLSIINKWA+MKFPYPGALTA+QYFTSAAGVFLC +
Sbjct: 24  TWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVFLCAQ 83

Query: 18  LKLVEH 1
           +KL+EH
Sbjct: 84  MKLIEH 89


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