BLASTX nr result

ID: Glycyrrhiza23_contig00008929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008929
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   246   1e-63
ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   239   1e-61
ref|NP_199329.1| Root hair defective 3 GTP-binding protein (RHD3...   236   2e-60
ref|XP_002865275.1| root hair defective 3 GTP-binding family pro...   234   4e-60
emb|CBI35950.3| unnamed protein product [Vitis vinifera]              229   2e-58

>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
           max]
          Length = 829

 Score =  246 bits (629), Expect = 1e-63
 Identities = 120/135 (88%), Positives = 126/135 (93%)
 Frame = +2

Query: 8   SDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHLFR 187
           ++DDC ATQLI GDG FN +GLDNFI++ NL +CGLSYAVVAIMGPQSSGKSTLMNHLF 
Sbjct: 2   ANDDCCATQLIDGDGEFNVAGLDNFIRTVNLASCGLSYAVVAIMGPQSSGKSTLMNHLFH 61

Query: 188 TSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFAL 367
           TSFREMDAFRGR QTTKGIWIAKCVGIEP TIAMDLEGTDGRERGEDDTAFEKQSALFAL
Sbjct: 62  TSFREMDAFRGRSQTTKGIWIAKCVGIEPSTIAMDLEGTDGRERGEDDTAFEKQSALFAL 121

Query: 368 AISDIVLINMWCHDI 412
           AISDIVLINMWCHDI
Sbjct: 122 AISDIVLINMWCHDI 136


>ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine
           max]
          Length = 829

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/135 (86%), Positives = 124/135 (91%)
 Frame = +2

Query: 8   SDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHLFR 187
           ++DDC ATQLI G   FN +GLD+FI++ NL +CGLSYAVVAIMGPQSSGKSTLMNHLF 
Sbjct: 2   ANDDCCATQLIDGHAEFNVAGLDSFIRTVNLASCGLSYAVVAIMGPQSSGKSTLMNHLFH 61

Query: 188 TSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFAL 367
           TSFREMDAFRGR QTTKGIWIAKCVGIEP TIAMDLEGTDGRERGEDDTAFEKQSALFAL
Sbjct: 62  TSFREMDAFRGRSQTTKGIWIAKCVGIEPSTIAMDLEGTDGRERGEDDTAFEKQSALFAL 121

Query: 368 AISDIVLINMWCHDI 412
           AISDIVLINMWCHDI
Sbjct: 122 AISDIVLINMWCHDI 136


>ref|NP_199329.1| Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis
           thaliana] gi|75171237|sp|Q9FKE9.1|RD3H2_ARATH RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3 homolog 2; AltName:
           Full=Protein SEY1 homolog 3 gi|9759601|dbj|BAB11389.1|
           GTP-binding protein-like; root hair defective 3
           protein-like [Arabidopsis thaliana]
           gi|332007828|gb|AED95211.1| Root hair defective 3
           GTP-binding protein (RHD3) [Arabidopsis thaliana]
          Length = 834

 Score =  236 bits (601), Expect = 2e-60
 Identities = 112/137 (81%), Positives = 124/137 (90%)
 Frame = +2

Query: 2   MGSDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHL 181
           MG +DD  +TQLI G+G FN  GLDNF+K T L+ CGLSYAVVAIMGPQSSGKSTL+NHL
Sbjct: 1   MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHL 60

Query: 182 FRTSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALF 361
           F+TSFREMDAF GR QTTKGIW+A+CVGIEPFTIAMDLEGTDGRERGEDDT FEKQSALF
Sbjct: 61  FKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQSALF 120

Query: 362 ALAISDIVLINMWCHDI 412
           A+A++DIVLINMWCHDI
Sbjct: 121 AIAVADIVLINMWCHDI 137


>ref|XP_002865275.1| root hair defective 3 GTP-binding family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297311110|gb|EFH41534.1| root
           hair defective 3 GTP-binding family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 833

 Score =  234 bits (598), Expect = 4e-60
 Identities = 111/137 (81%), Positives = 124/137 (90%)
 Frame = +2

Query: 2   MGSDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHL 181
           MG +DD  +TQLI G+G FN  GLDNF+K T L+ CGLSYAVVAIMGPQSSGKSTL+NHL
Sbjct: 1   MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHL 60

Query: 182 FRTSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALF 361
           F+TSFREMDAF GR QTTKGIW+A+CVGIEPFTIAMDLEGTDGRERGEDDT FE+QSALF
Sbjct: 61  FKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFERQSALF 120

Query: 362 ALAISDIVLINMWCHDI 412
           A+A++DIVLINMWCHDI
Sbjct: 121 AIAVADIVLINMWCHDI 137


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/137 (78%), Positives = 121/137 (88%)
 Frame = +2

Query: 2   MGSDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHL 181
           MG+ D+C +TQLI GDG+FN  GL+NF+K   L  CGLSYAVV+IMGPQSSGKSTL+NHL
Sbjct: 217 MGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 276

Query: 182 FRTSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALF 361
           F T+FREMDAFRGR QTTKGIW+A+C  IEP T+ MDLEGTDGRERGEDDTAFEKQSALF
Sbjct: 277 FGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 336

Query: 362 ALAISDIVLINMWCHDI 412
           ALA+SDIVLINMWCHDI
Sbjct: 337 ALAVSDIVLINMWCHDI 353


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