BLASTX nr result

ID: Glycyrrhiza23_contig00008901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008901
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807...   199   1e-49
ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818...   199   1e-49
gb|ACU23248.1| unknown [Glycine max]                                  199   1e-49
gb|AFK35450.1| unknown [Medicago truncatula]                          182   2e-44
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...   164   9e-39

>ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
          Length = 244

 Score =  199 bits (507), Expect = 1e-49
 Identities = 107/142 (75%), Positives = 113/142 (79%)
 Frame = -2

Query: 428 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVXXXXXXXXXXXXXXXX 249
           MAF++KIG LLK+SAVKHINQD S STPSLFQAIRSMSSAKLFV                
Sbjct: 1   MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFV---------------- 44

Query: 248 XXXXXXGGISYSTDDMSLREAFGRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAI 69
                 GGISYSTDDMSLRE+F RYGEV+D KVIMDRETGRSRGFGF+TFATSEDASSAI
Sbjct: 45  ------GGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAI 98

Query: 68  QAMDGQDLHGRSIRVNYATERS 3
           Q MDGQDLHGR IRVNYATERS
Sbjct: 99  QGMDGQDLHGRRIRVNYATERS 120


>ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
          Length = 245

 Score =  199 bits (507), Expect = 1e-49
 Identities = 107/142 (75%), Positives = 114/142 (80%)
 Frame = -2

Query: 428 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVXXXXXXXXXXXXXXXX 249
           MAF++KIG L+K+SAVKHINQD S+STPSLFQAIRSMSSAKLFV                
Sbjct: 1   MAFLNKIGNLVKNSAVKHINQDFSVSTPSLFQAIRSMSSAKLFV---------------- 44

Query: 248 XXXXXXGGISYSTDDMSLREAFGRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAI 69
                 GGISYSTDDMSLRE+F RYGEV+D KVIMDRETGRSRGFGFITFATSEDASSAI
Sbjct: 45  ------GGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAI 98

Query: 68  QAMDGQDLHGRSIRVNYATERS 3
           Q MDGQDLHGR IRVNYATERS
Sbjct: 99  QGMDGQDLHGRRIRVNYATERS 120


>gb|ACU23248.1| unknown [Glycine max]
          Length = 243

 Score =  199 bits (507), Expect = 1e-49
 Identities = 107/142 (75%), Positives = 113/142 (79%)
 Frame = -2

Query: 428 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVXXXXXXXXXXXXXXXX 249
           MAF++KIG LLK+SAVKHINQD S STPSLFQAIRSMSSAKLFV                
Sbjct: 1   MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFV---------------- 44

Query: 248 XXXXXXGGISYSTDDMSLREAFGRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAI 69
                 GGISYSTDDMSLRE+F RYGEV+D KVIMDRETGRSRGFGF+TFATSEDASSAI
Sbjct: 45  ------GGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAI 98

Query: 68  QAMDGQDLHGRSIRVNYATERS 3
           Q MDGQDLHGR IRVNYATERS
Sbjct: 99  QGMDGQDLHGRRIRVNYATERS 120


>gb|AFK35450.1| unknown [Medicago truncatula]
          Length = 176

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/142 (66%), Positives = 111/142 (78%)
 Frame = -2

Query: 428 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVXXXXXXXXXXXXXXXX 249
           MAF  K GKLL++SAVKHIN D+SMSTPSLFQAIRSMSSAKLF+                
Sbjct: 1   MAFFGKTGKLLQNSAVKHINHDLSMSTPSLFQAIRSMSSAKLFI---------------- 44

Query: 248 XXXXXXGGISYSTDDMSLREAFGRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAI 69
                 GG+SYSTD+  LREAF RYG+VLDAK+IMDR+TGRSRGFGFITFATSE+ASSA+
Sbjct: 45  ------GGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSAL 98

Query: 68  QAMDGQDLHGRSIRVNYATERS 3
           QAMD ++L GR++RVNYATER+
Sbjct: 99  QAMDNKELDGRTVRVNYATERA 120


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/141 (58%), Positives = 105/141 (74%)
 Frame = -2

Query: 428 MAFVSKIGKLLKSSAVKHINQDVSMSTPSLFQAIRSMSSAKLFVXXXXXXXXXXXXXXXX 249
           MAF+SK+G LL+ +A K I+ ++S S PS+FQAIR MSS+K+FV                
Sbjct: 1   MAFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFV---------------- 44

Query: 248 XXXXXXGGISYSTDDMSLREAFGRYGEVLDAKVIMDRETGRSRGFGFITFATSEDASSAI 69
                 GGISY TDD SLREAFG+YGEV++A+VI+DRETGRSRGF F+T+ +SE+ASSAI
Sbjct: 45  ------GGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAI 98

Query: 68  QAMDGQDLHGRSIRVNYATER 6
           QA+DGQDLHGR +RVNYA +R
Sbjct: 99  QALDGQDLHGRRVRVNYANDR 119


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