BLASTX nr result

ID: Glycyrrhiza23_contig00008880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00008880
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531512.1| PREDICTED: uncharacterized protein LOC100811...    93   1e-18
ref|XP_003532938.1| PREDICTED: uncharacterized protein LOC100811...    91   1e-17
ref|XP_003608234.1| hypothetical protein MTR_4g091090 [Medicago ...    91   2e-16
ref|XP_003546789.1| PREDICTED: uncharacterized protein LOC100784...    90   3e-16
ref|XP_003637016.1| hypothetical protein MTR_067s0027 [Medicago ...    88   1e-15

>ref|XP_003531512.1| PREDICTED: uncharacterized protein LOC100811721 [Glycine max]
          Length = 74

 Score = 92.8 bits (229), Expect(2) = 1e-18
 Identities = 44/67 (65%), Positives = 46/67 (68%)
 Frame = +3

Query: 135 PLVSYPPTVTASYVTAPPPMGYPSKDGPQAQGYPQQSVPEQTTSRGDGFWKGXXXXXXXX 314
           P VSYPP   A YV+APPPMGYPSKD P A GYPQQ VPE+TTSRGDGFWKG        
Sbjct: 11  PAVSYPP---APYVSAPPPMGYPSKDDPTAVGYPQQRVPEETTSRGDGFWKGCCAALCCC 67

Query: 315 XXXDICF 335
              D CF
Sbjct: 68  WVLDCCF 74



 Score = 26.2 bits (56), Expect(2) = 1e-18
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 107 MSHFNNQQEAPGI 145
           MS FNNQQEAP +
Sbjct: 1   MSRFNNQQEAPAV 13


>ref|XP_003532938.1| PREDICTED: uncharacterized protein LOC100811368 [Glycine max]
          Length = 73

 Score = 90.5 bits (223), Expect(2) = 1e-17
 Identities = 43/65 (66%), Positives = 45/65 (69%)
 Frame = +3

Query: 141 VSYPPTVTASYVTAPPPMGYPSKDGPQAQGYPQQSVPEQTTSRGDGFWKGXXXXXXXXXX 320
           VSYPP   A YV+APPPMGYPSKD P A GYPQQ VPE+TTSRGDGFWKG          
Sbjct: 12  VSYPP---APYVSAPPPMGYPSKDDPTAVGYPQQRVPEETTSRGDGFWKGCCAALCCFWV 68

Query: 321 XDICF 335
            D CF
Sbjct: 69  LDCCF 73



 Score = 25.0 bits (53), Expect(2) = 1e-17
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 107 MSHFNNQQEAP 139
           MS FNNQQEAP
Sbjct: 1   MSRFNNQQEAP 11


>ref|XP_003608234.1| hypothetical protein MTR_4g091090 [Medicago truncatula]
           gi|87240733|gb|ABD32591.1| conserved hypothetical
           protein [Medicago truncatula]
           gi|355509289|gb|AES90431.1| hypothetical protein
           MTR_4g091090 [Medicago truncatula]
           gi|388494888|gb|AFK35510.1| unknown [Medicago
           truncatula]
          Length = 80

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/73 (61%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
 Frame = +3

Query: 129 KKPLVSYPPT----VTASYVTAPPPMGYPSKDGPQAQGYPQQSVPEQTTSRGDGFWKGXX 296
           K P VSYPP      T  YVTAPPPMGYPSKDG  + GYPQQ +P+QTTSRGDGFWKG  
Sbjct: 10  KAPSVSYPPPGEAYSTPQYVTAPPPMGYPSKDG--SAGYPQQRIPDQTTSRGDGFWKGCC 67

Query: 297 XXXXXXXXXDICF 335
                    DICF
Sbjct: 68  AALCCCCALDICF 80


>ref|XP_003546789.1| PREDICTED: uncharacterized protein LOC100784629 [Glycine max]
          Length = 74

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/69 (62%), Positives = 46/69 (66%)
 Frame = +3

Query: 129 KKPLVSYPPTVTASYVTAPPPMGYPSKDGPQAQGYPQQSVPEQTTSRGDGFWKGXXXXXX 308
           + P VSYPP   A YV+APPPMGYPSK  P A GYPQQ VPE+TTSRGDGFWKG      
Sbjct: 9   ESPAVSYPP---ALYVSAPPPMGYPSKGDPTAVGYPQQRVPEETTSRGDGFWKGCCAALC 65

Query: 309 XXXXXDICF 335
                D CF
Sbjct: 66  CCWVLDCCF 74


>ref|XP_003637016.1| hypothetical protein MTR_067s0027 [Medicago truncatula]
           gi|358347055|ref|XP_003637578.1| hypothetical protein
           MTR_090s0052 [Medicago truncatula]
           gi|355502951|gb|AES84154.1| hypothetical protein
           MTR_067s0027 [Medicago truncatula]
           gi|355503513|gb|AES84716.1| hypothetical protein
           MTR_090s0052 [Medicago truncatula]
          Length = 79

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
 Frame = +3

Query: 141 VSYPPT----VTASYVTAPPPMGYPSKDGPQAQGYPQQSVPEQTTSRGDGFWKGXXXXXX 308
           +SYPP      T+ YVTAPPPMGYP+KDGP A+GYP Q +P+QTT+RGDGFWKG      
Sbjct: 12  ISYPPPGETYSTSPYVTAPPPMGYPTKDGP-AEGYPNQRIPDQTTTRGDGFWKGCCAALC 70

Query: 309 XXXXXDICF 335
                DICF
Sbjct: 71  CCCAIDICF 79


Top